7T6D
CryoEM structure of the YejM/LapB complex
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0005506 | molecular_function | iron ion binding |
| A | 0005515 | molecular_function | protein binding |
| A | 0005829 | cellular_component | cytosol |
| A | 0005886 | cellular_component | plasma membrane |
| A | 0008653 | biological_process | lipopolysaccharide metabolic process |
| A | 0009898 | cellular_component | cytoplasmic side of plasma membrane |
| A | 0046872 | molecular_function | metal ion binding |
| A | 0046890 | biological_process | regulation of lipid biosynthetic process |
| B | 0005506 | molecular_function | iron ion binding |
| B | 0005515 | molecular_function | protein binding |
| B | 0005829 | cellular_component | cytosol |
| B | 0005886 | cellular_component | plasma membrane |
| B | 0008653 | biological_process | lipopolysaccharide metabolic process |
| B | 0009898 | cellular_component | cytoplasmic side of plasma membrane |
| B | 0046872 | molecular_function | metal ion binding |
| B | 0046890 | biological_process | regulation of lipid biosynthetic process |
| C | 0005515 | molecular_function | protein binding |
| C | 0005886 | cellular_component | plasma membrane |
| C | 0008289 | molecular_function | lipid binding |
| C | 0016787 | molecular_function | hydrolase activity |
| C | 0030200 | biological_process | heparan sulfate proteoglycan catabolic process |
| D | 0005515 | molecular_function | protein binding |
| D | 0005886 | cellular_component | plasma membrane |
| D | 0008289 | molecular_function | lipid binding |
| D | 0016787 | molecular_function | hydrolase activity |
| D | 0030200 | biological_process | heparan sulfate proteoglycan catabolic process |
Functional Information from PROSITE/UniProt
| site_id | PS00430 |
| Number of Residues | 68 |
| Details | TONB_DEPENDENT_REC_1 TonB-dependent receptor (TBDR) proteins signature 1. mvthrqryrekvsqmvswghwfalfnillslvigsrylfiadwpttlagriysyvsiigh.......................................................FSFLVFAT |
| Chain | Residue | Details |
| C | MET1-THR68 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 368 |
| Details | Topological domain: {"description":"Cytoplasmic","evidences":[{"source":"HAMAP-Rule","id":"MF_00994","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"24187084","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 66 |
| Details | Repeat: {"description":"TPR 6","evidences":[{"source":"HAMAP-Rule","id":"MF_00994","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 8 |
| Details | Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_00994","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"24187084","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 38 |
| Details | Transmembrane: {"description":"Helical","evidences":[{"source":"HAMAP-Rule","id":"MF_00994","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"24187084","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI6 |
| Number of Residues | 33 |
| Details | Repeat: {"description":"TPR 1","evidences":[{"source":"HAMAP-Rule","id":"MF_00994","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI7 |
| Number of Residues | 66 |
| Details | Repeat: {"description":"TPR 2","evidences":[{"source":"HAMAP-Rule","id":"MF_00994","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI8 |
| Number of Residues | 66 |
| Details | Repeat: {"description":"TPR 3","evidences":[{"source":"HAMAP-Rule","id":"MF_00994","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI9 |
| Number of Residues | 64 |
| Details | Repeat: {"description":"TPR 4","evidences":[{"source":"HAMAP-Rule","id":"MF_00994","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI10 |
| Number of Residues | 66 |
| Details | Repeat: {"description":"TPR 5","evidences":[{"source":"HAMAP-Rule","id":"MF_00994","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI11 |
| Number of Residues | 66 |
| Details | Repeat: {"description":"TPR 7","evidences":[{"source":"HAMAP-Rule","id":"MF_00994","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI13 |
| Number of Residues | 212 |
| Details | Transmembrane: {"description":"Helical","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI14 |
| Number of Residues | 26 |
| Details | Topological domain: {"description":"Periplasmic","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI15 |
| Number of Residues | 26 |
| Details | Topological domain: {"description":"Cytoplasmic","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI16 |
| Number of Residues | 5 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"32788728","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"6XLP","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
