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7Q54

Single Particle Cryo-EM structure of photosynthetic A4B4-glyceraldehyde 3-phosphate dehydrogenase from Spinacia oleracia.

Functional Information from GO Data
ChainGOidnamespacecontents
A0004365molecular_functionglyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
A0006006biological_processglucose metabolic process
A0009507cellular_componentchloroplast
A0009536cellular_componentplastid
A0016491molecular_functionoxidoreductase activity
A0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
A0019253biological_processreductive pentose-phosphate cycle
A0047100molecular_functionglyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity
A0050661molecular_functionNADP binding
A0051287molecular_functionNAD binding
B0004365molecular_functionglyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
B0006006biological_processglucose metabolic process
B0009507cellular_componentchloroplast
B0009536cellular_componentplastid
B0016491molecular_functionoxidoreductase activity
B0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
B0019253biological_processreductive pentose-phosphate cycle
B0047100molecular_functionglyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity
B0050661molecular_functionNADP binding
B0051287molecular_functionNAD binding
C0004365molecular_functionglyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
C0006006biological_processglucose metabolic process
C0009507cellular_componentchloroplast
C0009536cellular_componentplastid
C0016491molecular_functionoxidoreductase activity
C0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
C0019253biological_processreductive pentose-phosphate cycle
C0047100molecular_functionglyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity
C0050661molecular_functionNADP binding
C0051287molecular_functionNAD binding
D0004365molecular_functionglyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
D0006006biological_processglucose metabolic process
D0009507cellular_componentchloroplast
D0009536cellular_componentplastid
D0016491molecular_functionoxidoreductase activity
D0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
D0019253biological_processreductive pentose-phosphate cycle
D0047100molecular_functionglyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity
D0050661molecular_functionNADP binding
D0051287molecular_functionNAD binding
O0004365molecular_functionglyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
O0006006biological_processglucose metabolic process
O0009507cellular_componentchloroplast
O0009536cellular_componentplastid
O0016491molecular_functionoxidoreductase activity
O0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
O0019253biological_processreductive pentose-phosphate cycle
O0047100molecular_functionglyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity
O0050661molecular_functionNADP binding
O0051287molecular_functionNAD binding
P0004365molecular_functionglyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
P0006006biological_processglucose metabolic process
P0009507cellular_componentchloroplast
P0009536cellular_componentplastid
P0016491molecular_functionoxidoreductase activity
P0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
P0019253biological_processreductive pentose-phosphate cycle
P0047100molecular_functionglyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity
P0050661molecular_functionNADP binding
P0051287molecular_functionNAD binding
Q0004365molecular_functionglyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
Q0006006biological_processglucose metabolic process
Q0009507cellular_componentchloroplast
Q0009536cellular_componentplastid
Q0016491molecular_functionoxidoreductase activity
Q0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
Q0019253biological_processreductive pentose-phosphate cycle
Q0047100molecular_functionglyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity
Q0050661molecular_functionNADP binding
Q0051287molecular_functionNAD binding
R0004365molecular_functionglyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
R0006006biological_processglucose metabolic process
R0009507cellular_componentchloroplast
R0009536cellular_componentplastid
R0016491molecular_functionoxidoreductase activity
R0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
R0019253biological_processreductive pentose-phosphate cycle
R0047100molecular_functionglyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity
R0050661molecular_functionNADP binding
R0051287molecular_functionNAD binding
Functional Information from PROSITE/UniProt
site_idPS00071
Number of Residues8
DetailsGAPDH Glyceraldehyde 3-phosphate dehydrogenase active site. ASCTTNcL
ChainResidueDetails
QALA147-LEU154
RALA147-LEU154

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsActive site: {"description":"Nucleophile","evidences":[{"source":"PROSITE-ProRule","id":"PRU10009","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues16
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"17573533","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues48
DetailsBinding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues8
DetailsSite: {"description":"Activates thiol group during catalysis","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues4
DetailsActive site: {"description":"Nucleophile"}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues16
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"11846565","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"12705826","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"15236965","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"17573533","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

240971

PDB entries from 2025-08-27

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