| Chain | GOid | namespace | contents |
| A | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
| A | 0000974 | cellular_component | Prp19 complex |
| A | 0003677 | molecular_function | DNA binding |
| A | 0003899 | molecular_function | DNA-directed RNA polymerase activity |
| A | 0005634 | cellular_component | nucleus |
| A | 0005665 | cellular_component | RNA polymerase II, core complex |
| A | 0005694 | cellular_component | chromosome |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0005739 | cellular_component | mitochondrion |
| A | 0006351 | biological_process | DNA-templated transcription |
| A | 0006366 | biological_process | transcription by RNA polymerase II |
| A | 0016740 | molecular_function | transferase activity |
| A | 0016779 | molecular_function | nucleotidyltransferase activity |
| A | 0016787 | molecular_function | hydrolase activity |
| A | 0031981 | cellular_component | nuclear lumen |
| A | 0033120 | biological_process | positive regulation of RNA splicing |
| A | 0034062 | molecular_function | 5'-3' RNA polymerase activity |
| A | 0046872 | molecular_function | metal ion binding |
| A | 1990841 | molecular_function | promoter-specific chromatin binding |
| B | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
| B | 0000781 | cellular_component | chromosome, telomeric region |
| B | 0001055 | molecular_function | obsolete RNA polymerase II activity |
| B | 0001172 | biological_process | RNA-templated transcription |
| B | 0003677 | molecular_function | DNA binding |
| B | 0003682 | molecular_function | chromatin binding |
| B | 0003899 | molecular_function | DNA-directed RNA polymerase activity |
| B | 0003968 | molecular_function | RNA-directed RNA polymerase activity |
| B | 0005634 | cellular_component | nucleus |
| B | 0005654 | cellular_component | nucleoplasm |
| B | 0005665 | cellular_component | RNA polymerase II, core complex |
| B | 0005739 | cellular_component | mitochondrion |
| B | 0006351 | biological_process | DNA-templated transcription |
| B | 0006366 | biological_process | transcription by RNA polymerase II |
| B | 0008270 | molecular_function | zinc ion binding |
| B | 0016740 | molecular_function | transferase activity |
| B | 0016779 | molecular_function | nucleotidyltransferase activity |
| B | 0032549 | molecular_function | ribonucleoside binding |
| B | 0034062 | molecular_function | 5'-3' RNA polymerase activity |
| B | 0046872 | molecular_function | metal ion binding |
| C | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
| C | 0003677 | molecular_function | DNA binding |
| C | 0003899 | molecular_function | DNA-directed RNA polymerase activity |
| C | 0005634 | cellular_component | nucleus |
| C | 0005654 | cellular_component | nucleoplasm |
| C | 0005665 | cellular_component | RNA polymerase II, core complex |
| C | 0005829 | cellular_component | cytosol |
| C | 0006351 | biological_process | DNA-templated transcription |
| C | 0006366 | biological_process | transcription by RNA polymerase II |
| C | 0046983 | molecular_function | protein dimerization activity |
| D | 0000166 | molecular_function | nucleotide binding |
| D | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
| D | 0005634 | cellular_component | nucleus |
| D | 0006352 | biological_process | DNA-templated transcription initiation |
| D | 0030880 | cellular_component | RNA polymerase complex |
| E | 0001054 | molecular_function | obsolete RNA polymerase I activity |
| E | 0001055 | molecular_function | obsolete RNA polymerase II activity |
| E | 0001056 | molecular_function | obsolete RNA polymerase III activity |
| E | 0003677 | molecular_function | DNA binding |
| E | 0003899 | molecular_function | DNA-directed RNA polymerase activity |
| E | 0005634 | cellular_component | nucleus |
| E | 0005654 | cellular_component | nucleoplasm |
| E | 0005665 | cellular_component | RNA polymerase II, core complex |
| E | 0005666 | cellular_component | RNA polymerase III complex |
| E | 0005736 | cellular_component | RNA polymerase I complex |
| E | 0006351 | biological_process | DNA-templated transcription |
| E | 0006362 | biological_process | transcription elongation by RNA polymerase I |
| E | 0006366 | biological_process | transcription by RNA polymerase II |
| E | 0042797 | biological_process | tRNA transcription by RNA polymerase III |
| F | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
| F | 0001054 | molecular_function | obsolete RNA polymerase I activity |
| F | 0001055 | molecular_function | obsolete RNA polymerase II activity |
| F | 0001056 | molecular_function | obsolete RNA polymerase III activity |
| F | 0001650 | cellular_component | fibrillar center |
| F | 0003677 | molecular_function | DNA binding |
| F | 0003899 | molecular_function | DNA-directed RNA polymerase activity |
| F | 0005634 | cellular_component | nucleus |
| F | 0005654 | cellular_component | nucleoplasm |
| F | 0005665 | cellular_component | RNA polymerase II, core complex |
| F | 0005666 | cellular_component | RNA polymerase III complex |
| F | 0005736 | cellular_component | RNA polymerase I complex |
| F | 0006351 | biological_process | DNA-templated transcription |
| F | 0006360 | biological_process | transcription by RNA polymerase I |
| F | 0006366 | biological_process | transcription by RNA polymerase II |
| F | 0042797 | biological_process | tRNA transcription by RNA polymerase III |
| G | 0003676 | molecular_function | nucleic acid binding |
| G | 0006351 | biological_process | DNA-templated transcription |
| G | 0006352 | biological_process | DNA-templated transcription initiation |
| H | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
| H | 0001054 | molecular_function | obsolete RNA polymerase I activity |
| H | 0001055 | molecular_function | obsolete RNA polymerase II activity |
| H | 0001056 | molecular_function | obsolete RNA polymerase III activity |
| H | 0003899 | molecular_function | DNA-directed RNA polymerase activity |
| H | 0005634 | cellular_component | nucleus |
| H | 0005654 | cellular_component | nucleoplasm |
| H | 0005665 | cellular_component | RNA polymerase II, core complex |
| H | 0005666 | cellular_component | RNA polymerase III complex |
| H | 0005736 | cellular_component | RNA polymerase I complex |
| H | 0006351 | biological_process | DNA-templated transcription |
| I | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
| I | 0001193 | biological_process | maintenance of transcriptional fidelity during transcription elongation by RNA polymerase II |
| I | 0003676 | molecular_function | nucleic acid binding |
| I | 0003899 | molecular_function | DNA-directed RNA polymerase activity |
| I | 0005634 | cellular_component | nucleus |
| I | 0005654 | cellular_component | nucleoplasm |
| I | 0005665 | cellular_component | RNA polymerase II, core complex |
| I | 0005730 | cellular_component | nucleolus |
| I | 0006283 | biological_process | transcription-coupled nucleotide-excision repair |
| I | 0006351 | biological_process | DNA-templated transcription |
| I | 0006366 | biological_process | transcription by RNA polymerase II |
| I | 0006367 | biological_process | transcription initiation at RNA polymerase II promoter |
| I | 0008270 | molecular_function | zinc ion binding |
| I | 0046872 | molecular_function | metal ion binding |
| J | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
| J | 0003677 | molecular_function | DNA binding |
| J | 0003899 | molecular_function | DNA-directed RNA polymerase activity |
| J | 0005665 | cellular_component | RNA polymerase II, core complex |
| J | 0006351 | biological_process | DNA-templated transcription |
| J | 0008270 | molecular_function | zinc ion binding |
| J | 0046872 | molecular_function | metal ion binding |
| K | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
| K | 0001055 | molecular_function | obsolete RNA polymerase II activity |
| K | 0003677 | molecular_function | DNA binding |
| K | 0003899 | molecular_function | DNA-directed RNA polymerase activity |
| K | 0005634 | cellular_component | nucleus |
| K | 0005665 | cellular_component | RNA polymerase II, core complex |
| K | 0006351 | biological_process | DNA-templated transcription |
| K | 0006366 | biological_process | transcription by RNA polymerase II |
| K | 0046983 | molecular_function | protein dimerization activity |
| L | 0001054 | molecular_function | obsolete RNA polymerase I activity |
| L | 0001055 | molecular_function | obsolete RNA polymerase II activity |
| L | 0001056 | molecular_function | obsolete RNA polymerase III activity |
| L | 0003677 | molecular_function | DNA binding |
| L | 0003899 | molecular_function | DNA-directed RNA polymerase activity |
| L | 0005634 | cellular_component | nucleus |
| L | 0005665 | cellular_component | RNA polymerase II, core complex |
| L | 0005666 | cellular_component | RNA polymerase III complex |
| L | 0005736 | cellular_component | RNA polymerase I complex |
| L | 0006351 | biological_process | DNA-templated transcription |
| L | 0006366 | biological_process | transcription by RNA polymerase II |
| L | 0008270 | molecular_function | zinc ion binding |
| L | 0046872 | molecular_function | metal ion binding |
| a | 0000012 | biological_process | single strand break repair |
| a | 0000109 | cellular_component | nucleotide-excision repair complex |
| a | 0000209 | biological_process | protein polyubiquitination |
| a | 0005515 | molecular_function | protein binding |
| a | 0005634 | cellular_component | nucleus |
| a | 0005654 | cellular_component | nucleoplasm |
| a | 0005694 | cellular_component | chromosome |
| a | 0006281 | biological_process | DNA repair |
| a | 0006283 | biological_process | transcription-coupled nucleotide-excision repair |
| a | 0006974 | biological_process | DNA damage response |
| a | 0006979 | biological_process | response to oxidative stress |
| a | 0009411 | biological_process | response to UV |
| a | 0010165 | biological_process | response to X-ray |
| a | 0010996 | biological_process | response to auditory stimulus |
| a | 0016363 | cellular_component | nuclear matrix |
| a | 0016567 | biological_process | protein ubiquitination |
| a | 0031464 | cellular_component | Cul4A-RING E3 ubiquitin ligase complex |
| a | 0032991 | cellular_component | protein-containing complex |
| a | 0043161 | biological_process | proteasome-mediated ubiquitin-dependent protein catabolic process |
| a | 0043204 | cellular_component | perikaryon |
| a | 0051865 | biological_process | protein autoubiquitination |
| a | 0080008 | cellular_component | Cul4-RING E3 ubiquitin ligase complex |
| a | 0090262 | biological_process | regulation of transcription-coupled nucleotide-excision repair |
| a | 0090734 | cellular_component | site of DNA damage |
| a | 0097680 | biological_process | double-strand break repair via classical nonhomologous end joining |
| a | 1990756 | molecular_function | ubiquitin-like ligase-substrate adaptor activity |
| b | 0000012 | biological_process | single strand break repair |
| b | 0000077 | biological_process | DNA damage checkpoint signaling |
| b | 0000166 | molecular_function | nucleotide binding |
| b | 0000303 | biological_process | response to superoxide |
| b | 0003677 | molecular_function | DNA binding |
| b | 0003678 | molecular_function | DNA helicase activity |
| b | 0003682 | molecular_function | chromatin binding |
| b | 0004386 | molecular_function | helicase activity |
| b | 0005515 | molecular_function | protein binding |
| b | 0005524 | molecular_function | ATP binding |
| b | 0005634 | cellular_component | nucleus |
| b | 0005654 | cellular_component | nucleoplasm |
| b | 0005694 | cellular_component | chromosome |
| b | 0005730 | cellular_component | nucleolus |
| b | 0006281 | biological_process | DNA repair |
| b | 0006283 | biological_process | transcription-coupled nucleotide-excision repair |
| b | 0006284 | biological_process | base-excision repair |
| b | 0006290 | biological_process | pyrimidine dimer repair |
| b | 0006338 | biological_process | chromatin remodeling |
| b | 0006362 | biological_process | transcription elongation by RNA polymerase I |
| b | 0006366 | biological_process | transcription by RNA polymerase II |
| b | 0006974 | biological_process | DNA damage response |
| b | 0006979 | biological_process | response to oxidative stress |
| b | 0007254 | biological_process | JNK cascade |
| b | 0007399 | biological_process | nervous system development |
| b | 0008023 | cellular_component | transcription elongation factor complex |
| b | 0008094 | molecular_function | ATP-dependent activity, acting on DNA |
| b | 0008630 | biological_process | intrinsic apoptotic signaling pathway in response to DNA damage |
| b | 0009411 | biological_process | response to UV |
| b | 0009636 | biological_process | response to toxic substance |
| b | 0010165 | biological_process | response to X-ray |
| b | 0010224 | biological_process | response to UV-B |
| b | 0010332 | biological_process | response to gamma radiation |
| b | 0016787 | molecular_function | hydrolase activity |
| b | 0016887 | molecular_function | ATP hydrolysis activity |
| b | 0022008 | biological_process | neurogenesis |
| b | 0030182 | biological_process | neuron differentiation |
| b | 0030296 | molecular_function | protein tyrosine kinase activator activity |
| b | 0031175 | biological_process | neuron projection development |
| b | 0032784 | biological_process | regulation of DNA-templated transcription elongation |
| b | 0032786 | biological_process | positive regulation of DNA-templated transcription, elongation |
| b | 0034243 | biological_process | regulation of transcription elongation by RNA polymerase II |
| b | 0035264 | biological_process | multicellular organism growth |
| b | 0042262 | biological_process | DNA protection |
| b | 0045494 | biological_process | photoreceptor cell maintenance |
| b | 0045739 | biological_process | positive regulation of DNA repair |
| b | 0045943 | biological_process | positive regulation of transcription by RNA polymerase I |
| b | 0045944 | biological_process | positive regulation of transcription by RNA polymerase II |
| b | 0045945 | biological_process | positive regulation of transcription by RNA polymerase III |
| b | 0060261 | biological_process | positive regulation of transcription initiation by RNA polymerase II |
| b | 0090734 | cellular_component | site of DNA damage |
| b | 0097680 | biological_process | double-strand break repair via classical nonhomologous end joining |
| b | 0110016 | cellular_component | B-WICH complex |
| b | 0140463 | molecular_function | chromatin-protein adaptor activity |
| b | 0140658 | molecular_function | ATP-dependent chromatin remodeler activity |
| b | 0140664 | molecular_function | ATP-dependent DNA damage sensor activity |
| b | 1905168 | biological_process | positive regulation of double-strand break repair via homologous recombination |
| b | 2001033 | biological_process | negative regulation of double-strand break repair via nonhomologous end joining |
| d | 0000781 | cellular_component | chromosome, telomeric region |
| d | 0003676 | molecular_function | nucleic acid binding |
| d | 0003677 | molecular_function | DNA binding |
| d | 0003684 | molecular_function | damaged DNA binding |
| d | 0005515 | molecular_function | protein binding |
| d | 0005615 | cellular_component | extracellular space |
| d | 0005634 | cellular_component | nucleus |
| d | 0005654 | cellular_component | nucleoplasm |
| d | 0005730 | cellular_component | nucleolus |
| d | 0005737 | cellular_component | cytoplasm |
| d | 0006281 | biological_process | DNA repair |
| d | 0006289 | biological_process | nucleotide-excision repair |
| d | 0006511 | biological_process | ubiquitin-dependent protein catabolic process |
| d | 0006915 | biological_process | apoptotic process |
| d | 0006974 | biological_process | DNA damage response |
| d | 0007056 | biological_process | spindle assembly involved in female meiosis |
| d | 0010498 | biological_process | proteasomal protein catabolic process |
| d | 0016055 | biological_process | Wnt signaling pathway |
| d | 0016567 | biological_process | protein ubiquitination |
| d | 0019076 | biological_process | viral release from host cell |
| d | 0030674 | molecular_function | protein-macromolecule adaptor activity |
| d | 0031464 | cellular_component | Cul4A-RING E3 ubiquitin ligase complex |
| d | 0031465 | cellular_component | Cul4B-RING E3 ubiquitin ligase complex |
| d | 0032991 | cellular_component | protein-containing complex |
| d | 0034644 | biological_process | cellular response to UV |
| d | 0035234 | biological_process | ectopic germ cell programmed cell death |
| d | 0035861 | cellular_component | site of double-strand break |
| d | 0042752 | biological_process | regulation of circadian rhythm |
| d | 0043066 | biological_process | negative regulation of apoptotic process |
| d | 0043161 | biological_process | proteasome-mediated ubiquitin-dependent protein catabolic process |
| d | 0044725 | biological_process | epigenetic programming in the zygotic pronuclei |
| d | 0044877 | molecular_function | protein-containing complex binding |
| d | 0045070 | biological_process | positive regulation of viral genome replication |
| d | 0045722 | biological_process | positive regulation of gluconeogenesis |
| d | 0045732 | biological_process | positive regulation of protein catabolic process |
| d | 0046726 | biological_process | positive regulation by virus of viral protein levels in host cell |
| d | 0048511 | biological_process | rhythmic process |
| d | 0051093 | biological_process | negative regulation of developmental process |
| d | 0051702 | biological_process | biological process involved in interaction with symbiont |
| d | 0070062 | cellular_component | extracellular exosome |
| d | 0070914 | biological_process | UV-damage excision repair |
| d | 0071987 | molecular_function | WD40-repeat domain binding |
| d | 0080008 | cellular_component | Cul4-RING E3 ubiquitin ligase complex |
| d | 0097602 | molecular_function | cullin family protein binding |
| d | 0160072 | molecular_function | ubiquitin ligase complex scaffold activity |
| d | 1901990 | biological_process | regulation of mitotic cell cycle phase transition |
| d | 2000242 | biological_process | negative regulation of reproductive process |
