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7O5M

Crystal structure of S-adenosyl-L-homocysteine hydrolase from Synechocystis sp. PCC 6803 cocrystallized with adenosine in the presence of Na+ cations

Functional Information from GO Data
ChainGOidnamespacecontents
A0004013molecular_functionadenosylhomocysteinase activity
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006730biological_processone-carbon metabolic process
A0016787molecular_functionhydrolase activity
A0033353biological_processS-adenosylmethionine cycle
A0071269biological_processL-homocysteine biosynthetic process
C0004013molecular_functionadenosylhomocysteinase activity
C0005737cellular_componentcytoplasm
C0005829cellular_componentcytosol
C0006730biological_processone-carbon metabolic process
C0016787molecular_functionhydrolase activity
C0033353biological_processS-adenosylmethionine cycle
C0071269biological_processL-homocysteine biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues9
Detailsbinding site for residue 1PE A 501
ChainResidue
AILE51
AASN127
ASER149
ASER149
AASP150
AILE152
AILE152
ALYS377
ALYS377

site_idAC2
Number of Residues30
Detailsbinding site for residue NAD A 502
ChainResidue
ATHR158
ATHR159
ATHR160
AASN192
ATHR196
AGLY221
AGLY223
ATRP224
ACYS225
AGLU244
AILE245
APRO249
AVAL276
ATHR277
AGLY278
AASN279
ASER300
AGLY301
AHIS302
ALEU345
AASN347
AHIS354
AADN503
AHOH613
AHOH654
AHOH676
AHOH703
AHOH722
AHOH743
AHOH769

site_idAC3
Number of Residues15
Detailsbinding site for residue ADN A 503
ChainResidue
AHIS58
ATHR60
AGLU62
ATHR63
AASP132
AGLU157
ATHR158
ALYS187
AASP191
AHIS302
AHIS354
AMET359
APHE363
ANAD502
AHOH621

site_idAC4
Number of Residues3
Detailsbinding site for residue CL A 504
ChainResidue
AARG41
AHOH650
AHOH854

site_idAC5
Number of Residues30
Detailsbinding site for residue NAD C 501
ChainResidue
CTHR158
CTHR159
CTHR160
CASN192
CTHR196
CGLY221
CGLY223
CTRP224
CCYS225
CGLU244
CILE245
CVAL276
CTHR277
CGLY278
CASN279
CVAL282
CSER300
CGLY301
CHIS302
CLEU345
CASN347
CHIS354
CGLN414
CHOH611
CHOH623
CHOH663
CHOH671
CHOH678
CHOH690
CHOH697

site_idAC6
Number of Residues1
Detailsbinding site for residue CL C 502
ChainResidue
CARG41

Functional Information from PROSITE/UniProt
site_idPS00738
Number of Residues15
DetailsADOHCYASE_1 S-adenosyl-L-homocysteine hydrolase signature 1. ASNpLSTQDdVAACL
ChainResidueDetails
AALA81-LEU95

site_idPS00739
Number of Residues17
DetailsADOHCYASE_2 S-adenosyl-L-homocysteine hydrolase signature 2. GKtivVaGYGwCGKGv.A
ChainResidueDetails
AGLY214-ALA230

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues24
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00563
ChainResidueDetails
ATHR60
AASN279
ASER300
AASN347
CTHR60
CASP132
CGLU157
CTHR158
CLYS187
CASP191
CASN192
AASP132
CGLY221
CGLU244
CASN279
CSER300
CASN347
AGLU157
ATHR158
ALYS187
AASP191
AASN192
AGLY221
AGLU244

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PDB entries from 2024-07-17

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