| Chain | GOid | namespace | contents |
| 0 | 0000019 | biological_process | regulation of mitotic recombination |
| 0 | 0000112 | cellular_component | nucleotide-excision repair factor 3 complex |
| 0 | 0000439 | cellular_component | transcription factor TFIIH core complex |
| 0 | 0003676 | molecular_function | nucleic acid binding |
| 0 | 0003677 | molecular_function | DNA binding |
| 0 | 0003678 | molecular_function | DNA helicase activity |
| 0 | 0003684 | molecular_function | damaged DNA binding |
| 0 | 0003689 | molecular_function | DNA clamp loader activity |
| 0 | 0004386 | molecular_function | helicase activity |
| 0 | 0005515 | molecular_function | protein binding |
| 0 | 0005524 | molecular_function | ATP binding |
| 0 | 0005634 | cellular_component | nucleus |
| 0 | 0005675 | cellular_component | transcription factor TFIIH holo complex |
| 0 | 0005829 | cellular_component | cytosol |
| 0 | 0006139 | biological_process | nucleobase-containing compound metabolic process |
| 0 | 0006281 | biological_process | DNA repair |
| 0 | 0006289 | biological_process | nucleotide-excision repair |
| 0 | 0006338 | biological_process | chromatin remodeling |
| 0 | 0006366 | biological_process | transcription by RNA polymerase II |
| 0 | 0006367 | biological_process | transcription initiation at RNA polymerase II promoter |
| 0 | 0006974 | biological_process | DNA damage response |
| 0 | 0008094 | molecular_function | ATP-dependent activity, acting on DNA |
| 0 | 0009378 | molecular_function | four-way junction helicase activity |
| 0 | 0016787 | molecular_function | hydrolase activity |
| 0 | 0016818 | molecular_function | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides |
| 0 | 0016853 | molecular_function | isomerase activity |
| 0 | 0016887 | molecular_function | ATP hydrolysis activity |
| 0 | 0032508 | biological_process | DNA duplex unwinding |
| 0 | 0036121 | molecular_function | double-stranded DNA helicase activity |
| 0 | 0043139 | molecular_function | 5'-3' DNA helicase activity |
| 0 | 0045951 | biological_process | positive regulation of mitotic recombination |
| 0 | 0046872 | molecular_function | metal ion binding |
| 0 | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
| 0 | 0061749 | molecular_function | forked DNA-dependent helicase activity |
| 0 | 0061775 | molecular_function | cohesin loader activity |
| 0 | 0140584 | molecular_function | chromatin extrusion motor activity |
| 0 | 0140588 | biological_process | chromatin looping |
| 0 | 0140665 | molecular_function | ATP-dependent H3-H4 histone complex chaperone activity |
| 0 | 0140849 | molecular_function | ATP-dependent H2AZ histone chaperone activity |
| 0 | 1990518 | molecular_function | single-stranded 3'-5' DNA helicase activity |
| 1 | 0000112 | cellular_component | nucleotide-excision repair factor 3 complex |
| 1 | 0000439 | cellular_component | transcription factor TFIIH core complex |
| 1 | 0005515 | molecular_function | protein binding |
| 1 | 0005634 | cellular_component | nucleus |
| 1 | 0005675 | cellular_component | transcription factor TFIIH holo complex |
| 1 | 0005829 | cellular_component | cytosol |
| 1 | 0006281 | biological_process | DNA repair |
| 1 | 0006289 | biological_process | nucleotide-excision repair |
| 1 | 0006351 | biological_process | DNA-templated transcription |
| 1 | 0006360 | biological_process | transcription by RNA polymerase I |
| 1 | 0006366 | biological_process | transcription by RNA polymerase II |
| 1 | 0006367 | biological_process | transcription initiation at RNA polymerase II promoter |
| 1 | 0010314 | molecular_function | phosphatidylinositol-5-phosphate binding |
| 1 | 0032266 | molecular_function | phosphatidylinositol-3-phosphate binding |
| 2 | 0000112 | cellular_component | nucleotide-excision repair factor 3 complex |
| 2 | 0000439 | cellular_component | transcription factor TFIIH core complex |
| 2 | 0001671 | molecular_function | ATPase activator activity |
| 2 | 0003690 | molecular_function | double-stranded DNA binding |
| 2 | 0005515 | molecular_function | protein binding |
| 2 | 0005634 | cellular_component | nucleus |
| 2 | 0005675 | cellular_component | transcription factor TFIIH holo complex |
| 2 | 0006281 | biological_process | DNA repair |
| 2 | 0006289 | biological_process | nucleotide-excision repair |
| 2 | 0006366 | biological_process | transcription by RNA polymerase II |
| 2 | 0006367 | biological_process | transcription initiation at RNA polymerase II promoter |
| 3 | 0000993 | molecular_function | RNA polymerase II complex binding |
| 3 | 0005634 | cellular_component | nucleus |
| 3 | 0005675 | cellular_component | transcription factor TFIIH holo complex |
| 3 | 0006281 | biological_process | DNA repair |
| 3 | 0006289 | biological_process | nucleotide-excision repair |
| 3 | 0006357 | biological_process | regulation of transcription by RNA polymerase II |
| 3 | 0006366 | biological_process | transcription by RNA polymerase II |
| 3 | 0006367 | biological_process | transcription initiation at RNA polymerase II promoter |
| 3 | 0008270 | molecular_function | zinc ion binding |
| 3 | 0045737 | biological_process | positive regulation of cyclin-dependent protein serine/threonine kinase activity |
| 3 | 0046872 | molecular_function | metal ion binding |
| 3 | 0061575 | molecular_function | cyclin-dependent protein serine/threonine kinase activator activity |
| 3 | 0070985 | cellular_component | transcription factor TFIIK complex |
| 4 | 0000112 | cellular_component | nucleotide-excision repair factor 3 complex |
| 4 | 0000439 | cellular_component | transcription factor TFIIH core complex |
| 4 | 0005634 | cellular_component | nucleus |
| 4 | 0005675 | cellular_component | transcription factor TFIIH holo complex |
| 4 | 0006281 | biological_process | DNA repair |
| 4 | 0006289 | biological_process | nucleotide-excision repair |
| 4 | 0006355 | biological_process | regulation of DNA-templated transcription |
| 4 | 0006366 | biological_process | transcription by RNA polymerase II |
| 4 | 0006367 | biological_process | transcription initiation at RNA polymerase II promoter |
| 4 | 0008270 | molecular_function | zinc ion binding |
| 4 | 0016251 | molecular_function | RNA polymerase II general transcription initiation factor activity |
| 4 | 0046872 | molecular_function | metal ion binding |
| 5 | 0000439 | cellular_component | transcription factor TFIIH core complex |
| 5 | 0000993 | molecular_function | RNA polymerase II complex binding |
| 5 | 0005515 | molecular_function | protein binding |
| 5 | 0005634 | cellular_component | nucleus |
| 5 | 0005675 | cellular_component | transcription factor TFIIH holo complex |
| 5 | 0005829 | cellular_component | cytosol |
| 5 | 0006281 | biological_process | DNA repair |
| 5 | 0006289 | biological_process | nucleotide-excision repair |
| 5 | 0006294 | biological_process | nucleotide-excision repair, preincision complex assembly |
| 5 | 0006366 | biological_process | transcription by RNA polymerase II |
| 5 | 0006367 | biological_process | transcription initiation at RNA polymerase II promoter |
| 6 | 0000112 | cellular_component | nucleotide-excision repair factor 3 complex |
| 6 | 0000439 | cellular_component | transcription factor TFIIH core complex |
| 6 | 0005634 | cellular_component | nucleus |
| 6 | 0005675 | cellular_component | transcription factor TFIIH holo complex |
| 6 | 0006281 | biological_process | DNA repair |
| 6 | 0006289 | biological_process | nucleotide-excision repair |
| 6 | 0006351 | biological_process | DNA-templated transcription |
| 6 | 0006357 | biological_process | regulation of transcription by RNA polymerase II |
| 6 | 0006366 | biological_process | transcription by RNA polymerase II |
| 6 | 0006367 | biological_process | transcription initiation at RNA polymerase II promoter |
| 6 | 0008270 | molecular_function | zinc ion binding |
| 6 | 0046872 | molecular_function | metal ion binding |
| 6 | 0061630 | molecular_function | ubiquitin protein ligase activity |
| 7 | 0000019 | biological_process | regulation of mitotic recombination |
| 7 | 0000112 | cellular_component | nucleotide-excision repair factor 3 complex |
| 7 | 0000439 | cellular_component | transcription factor TFIIH core complex |
| 7 | 0001111 | biological_process | RNA polymerase II promoter clearance |
| 7 | 0001113 | biological_process | transcription open complex formation at RNA polymerase II promoter |
| 7 | 0001174 | biological_process | transcriptional start site selection at RNA polymerase II promoter |
| 7 | 0003677 | molecular_function | DNA binding |
| 7 | 0003678 | molecular_function | DNA helicase activity |
| 7 | 0003689 | molecular_function | DNA clamp loader activity |
| 7 | 0004386 | molecular_function | helicase activity |
| 7 | 0005524 | molecular_function | ATP binding |
| 7 | 0005634 | cellular_component | nucleus |
| 7 | 0005675 | cellular_component | transcription factor TFIIH holo complex |
| 7 | 0005829 | cellular_component | cytosol |
| 7 | 0006281 | biological_process | DNA repair |
| 7 | 0006289 | biological_process | nucleotide-excision repair |
| 7 | 0006338 | biological_process | chromatin remodeling |
| 7 | 0006366 | biological_process | transcription by RNA polymerase II |
| 7 | 0006367 | biological_process | transcription initiation at RNA polymerase II promoter |
| 7 | 0009378 | molecular_function | four-way junction helicase activity |
| 7 | 0015616 | molecular_function | DNA translocase activity |
| 7 | 0016787 | molecular_function | hydrolase activity |
| 7 | 0016853 | molecular_function | isomerase activity |
| 7 | 0016887 | molecular_function | ATP hydrolysis activity |
| 7 | 0016973 | biological_process | poly(A)+ mRNA export from nucleus |
| 7 | 0032508 | biological_process | DNA duplex unwinding |
| 7 | 0036121 | molecular_function | double-stranded DNA helicase activity |
| 7 | 0043138 | molecular_function | 3'-5' DNA helicase activity |
| 7 | 0061749 | molecular_function | forked DNA-dependent helicase activity |
| 7 | 0061775 | molecular_function | cohesin loader activity |
| 7 | 0097550 | cellular_component | transcription preinitiation complex |
| 7 | 0140584 | molecular_function | chromatin extrusion motor activity |
| 7 | 0140588 | biological_process | chromatin looping |
| 7 | 0140665 | molecular_function | ATP-dependent H3-H4 histone complex chaperone activity |
| 7 | 0140849 | molecular_function | ATP-dependent H2AZ histone chaperone activity |
| 7 | 1990518 | molecular_function | single-stranded 3'-5' DNA helicase activity |
| A | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
| A | 0001054 | molecular_function | RNA polymerase I activity |
| A | 0001055 | molecular_function | RNA polymerase II activity |
| A | 0001056 | molecular_function | RNA polymerase III activity |
| A | 0001057 | molecular_function | RNA polymerase IV activity |
| A | 0001058 | molecular_function | RNA polymerase V activity |
| A | 0001059 | biological_process | transcription by RNA polymerase IV |
| A | 0001060 | biological_process | transcription by RNA polymerase V |
| A | 0001065 | molecular_function | mitochondrial single subunit type RNA polymerase activity |
| A | 0001066 | molecular_function | plastid single subunit type RNA polymerase activity |
| A | 0001172 | biological_process | RNA-templated transcription |
| A | 0003677 | molecular_function | DNA binding |
| A | 0003899 | molecular_function | DNA-directed 5'-3' RNA polymerase activity |
| A | 0003968 | molecular_function | RNA-dependent RNA polymerase activity |
| A | 0005515 | molecular_function | protein binding |
| A | 0005634 | cellular_component | nucleus |
| A | 0005665 | cellular_component | RNA polymerase II, core complex |
| A | 0005739 | cellular_component | mitochondrion |
| A | 0006351 | biological_process | DNA-templated transcription |
| A | 0006360 | biological_process | transcription by RNA polymerase I |
| A | 0006366 | biological_process | transcription by RNA polymerase II |
| A | 0006367 | biological_process | transcription initiation at RNA polymerase II promoter |
| A | 0006368 | biological_process | transcription elongation by RNA polymerase II |
| A | 0006383 | biological_process | transcription by RNA polymerase III |
| A | 0006390 | biological_process | mitochondrial transcription |
| A | 0008270 | molecular_function | zinc ion binding |
| A | 0010494 | cellular_component | cytoplasmic stress granule |
| A | 0016779 | molecular_function | nucleotidyltransferase activity |
| A | 0019985 | biological_process | translesion synthesis |
| A | 0034062 | molecular_function | 5'-3' RNA polymerase activity |
| A | 0042793 | biological_process | plastid transcription |
| A | 0046872 | molecular_function | metal ion binding |
| B | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
| B | 0001054 | molecular_function | RNA polymerase I activity |
| B | 0001055 | molecular_function | RNA polymerase II activity |
| B | 0001056 | molecular_function | RNA polymerase III activity |
| B | 0001057 | molecular_function | RNA polymerase IV activity |
| B | 0001058 | molecular_function | RNA polymerase V activity |
| B | 0001059 | biological_process | transcription by RNA polymerase IV |
| B | 0001060 | biological_process | transcription by RNA polymerase V |
| B | 0001065 | molecular_function | mitochondrial single subunit type RNA polymerase activity |
| B | 0001066 | molecular_function | plastid single subunit type RNA polymerase activity |
| B | 0001172 | biological_process | RNA-templated transcription |
| B | 0003677 | molecular_function | DNA binding |
| B | 0003729 | molecular_function | mRNA binding |
| B | 0003899 | molecular_function | DNA-directed 5'-3' RNA polymerase activity |
| B | 0003968 | molecular_function | RNA-dependent RNA polymerase activity |
| B | 0005515 | molecular_function | protein binding |
| B | 0005634 | cellular_component | nucleus |
| B | 0005665 | cellular_component | RNA polymerase II, core complex |
| B | 0005739 | cellular_component | mitochondrion |
| B | 0006351 | biological_process | DNA-templated transcription |
| B | 0006360 | biological_process | transcription by RNA polymerase I |
| B | 0006366 | biological_process | transcription by RNA polymerase II |
| B | 0006367 | biological_process | transcription initiation at RNA polymerase II promoter |
| B | 0006368 | biological_process | transcription elongation by RNA polymerase II |
| B | 0006383 | biological_process | transcription by RNA polymerase III |
| B | 0006390 | biological_process | mitochondrial transcription |
| B | 0008270 | molecular_function | zinc ion binding |
| B | 0010494 | cellular_component | cytoplasmic stress granule |
| B | 0016779 | molecular_function | nucleotidyltransferase activity |
| B | 0032549 | molecular_function | ribonucleoside binding |
| B | 0034062 | molecular_function | 5'-3' RNA polymerase activity |
| B | 0042793 | biological_process | plastid transcription |
| B | 0046872 | molecular_function | metal ion binding |
| D | 0000166 | molecular_function | nucleotide binding |
| D | 0000288 | biological_process | nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay |
| D | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
| D | 0000932 | cellular_component | P-body |
| D | 0001172 | biological_process | RNA-templated transcription |
| D | 0003697 | molecular_function | single-stranded DNA binding |
| D | 0003727 | molecular_function | single-stranded RNA binding |
| D | 0003968 | molecular_function | RNA-dependent RNA polymerase activity |
| D | 0005515 | molecular_function | protein binding |
| D | 0005634 | cellular_component | nucleus |
| D | 0005665 | cellular_component | RNA polymerase II, core complex |
| D | 0005737 | cellular_component | cytoplasm |
| D | 0006352 | biological_process | DNA-templated transcription initiation |
| D | 0006366 | biological_process | transcription by RNA polymerase II |
| D | 0006367 | biological_process | transcription initiation at RNA polymerase II promoter |
| D | 0006368 | biological_process | transcription elongation by RNA polymerase II |
| D | 0006397 | biological_process | mRNA processing |
| D | 0030880 | cellular_component | RNA polymerase complex |
| D | 0031369 | molecular_function | translation initiation factor binding |
| D | 0044237 | biological_process | cellular metabolic process |
| D | 0045948 | biological_process | positive regulation of translational initiation |
| D | 1990328 | cellular_component | RPB4-RPB7 complex |
| F | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
| F | 0001054 | molecular_function | RNA polymerase I activity |
| F | 0001055 | molecular_function | RNA polymerase II activity |
| F | 0001056 | molecular_function | RNA polymerase III activity |
| F | 0001172 | biological_process | RNA-templated transcription |
| F | 0003677 | molecular_function | DNA binding |
| F | 0003899 | molecular_function | DNA-directed 5'-3' RNA polymerase activity |
| F | 0003968 | molecular_function | RNA-dependent RNA polymerase activity |
| F | 0005515 | molecular_function | protein binding |
| F | 0005634 | cellular_component | nucleus |
| F | 0005654 | cellular_component | nucleoplasm |
| F | 0005665 | cellular_component | RNA polymerase II, core complex |
| F | 0005666 | cellular_component | RNA polymerase III complex |
| F | 0005736 | cellular_component | RNA polymerase I complex |
| F | 0005737 | cellular_component | cytoplasm |
| F | 0006351 | biological_process | DNA-templated transcription |
| F | 0006360 | biological_process | transcription by RNA polymerase I |
| F | 0006361 | biological_process | transcription initiation at RNA polymerase I promoter |
| F | 0006362 | biological_process | transcription elongation by RNA polymerase I |
| F | 0006363 | biological_process | termination of RNA polymerase I transcription |
| F | 0006366 | biological_process | transcription by RNA polymerase II |
| F | 0006367 | biological_process | transcription initiation at RNA polymerase II promoter |
| F | 0006368 | biological_process | transcription elongation by RNA polymerase II |
| F | 0006383 | biological_process | transcription by RNA polymerase III |
| F | 0006384 | biological_process | transcription initiation at RNA polymerase III promoter |
| F | 0006386 | biological_process | termination of RNA polymerase III transcription |
| F | 0042254 | biological_process | ribosome biogenesis |
| F | 0042790 | biological_process | nucleolar large rRNA transcription by RNA polymerase I |
| F | 0042797 | biological_process | tRNA transcription by RNA polymerase III |
| G | 0000288 | biological_process | nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay |
| G | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
| G | 0000932 | cellular_component | P-body |
| G | 0000956 | biological_process | nuclear-transcribed mRNA catabolic process |
| G | 0001172 | biological_process | RNA-templated transcription |
| G | 0003676 | molecular_function | nucleic acid binding |
| G | 0003697 | molecular_function | single-stranded DNA binding |
| G | 0003727 | molecular_function | single-stranded RNA binding |
| G | 0003968 | molecular_function | RNA-dependent RNA polymerase activity |
| G | 0005515 | molecular_function | protein binding |
| G | 0005634 | cellular_component | nucleus |
| G | 0005665 | cellular_component | RNA polymerase II, core complex |
| G | 0005737 | cellular_component | cytoplasm |
| G | 0006351 | biological_process | DNA-templated transcription |
| G | 0006352 | biological_process | DNA-templated transcription initiation |
| G | 0006366 | biological_process | transcription by RNA polymerase II |
| G | 0006367 | biological_process | transcription initiation at RNA polymerase II promoter |
| G | 0006368 | biological_process | transcription elongation by RNA polymerase II |
| G | 0031369 | molecular_function | translation initiation factor binding |
| G | 0045948 | biological_process | positive regulation of translational initiation |
| G | 0055029 | cellular_component | nuclear DNA-directed RNA polymerase complex |
| G | 0060213 | biological_process | positive regulation of nuclear-transcribed mRNA poly(A) tail shortening |
| G | 1990328 | cellular_component | RPB4-RPB7 complex |
| W | 0000993 | molecular_function | RNA polymerase II complex binding |
| W | 0001097 | molecular_function | TFIIH-class transcription factor complex binding |
| W | 0001113 | biological_process | transcription open complex formation at RNA polymerase II promoter |
| W | 0003697 | molecular_function | single-stranded DNA binding |
| W | 0005515 | molecular_function | protein binding |
| W | 0005634 | cellular_component | nucleus |
| W | 0005673 | cellular_component | transcription factor TFIIE complex |
| W | 0005739 | cellular_component | mitochondrion |
| W | 0006366 | biological_process | transcription by RNA polymerase II |
| W | 0006367 | biological_process | transcription initiation at RNA polymerase II promoter |
| W | 0008270 | molecular_function | zinc ion binding |
| W | 0046872 | molecular_function | metal ion binding |
| W | 0097550 | cellular_component | transcription preinitiation complex |
| X | 0000993 | molecular_function | RNA polymerase II complex binding |
| X | 0001097 | molecular_function | TFIIH-class transcription factor complex binding |
| X | 0003677 | molecular_function | DNA binding |
| X | 0003697 | molecular_function | single-stranded DNA binding |
| X | 0005515 | molecular_function | protein binding |
| X | 0005634 | cellular_component | nucleus |
| X | 0005673 | cellular_component | transcription factor TFIIE complex |
| X | 0006366 | biological_process | transcription by RNA polymerase II |
| X | 0006367 | biological_process | transcription initiation at RNA polymerase II promoter |
| X | 0097550 | cellular_component | transcription preinitiation complex |
