7NOV
Crystal structure of Mycobacterium tuberculosis ArgF in complex with (4-methyl-3-nitrophenyl)boronic acid.
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0004585 | molecular_function | ornithine carbamoyltransferase activity |
A | 0005737 | cellular_component | cytoplasm |
A | 0006520 | biological_process | amino acid metabolic process |
A | 0006526 | biological_process | L-arginine biosynthetic process |
A | 0006591 | biological_process | ornithine metabolic process |
A | 0016597 | molecular_function | amino acid binding |
A | 0016740 | molecular_function | transferase activity |
A | 0016743 | molecular_function | carboxyl- or carbamoyltransferase activity |
A | 0019240 | biological_process | citrulline biosynthetic process |
A | 0042450 | biological_process | arginine biosynthetic process via ornithine |
B | 0004585 | molecular_function | ornithine carbamoyltransferase activity |
B | 0005737 | cellular_component | cytoplasm |
B | 0006520 | biological_process | amino acid metabolic process |
B | 0006526 | biological_process | L-arginine biosynthetic process |
B | 0006591 | biological_process | ornithine metabolic process |
B | 0016597 | molecular_function | amino acid binding |
B | 0016740 | molecular_function | transferase activity |
B | 0016743 | molecular_function | carboxyl- or carbamoyltransferase activity |
B | 0019240 | biological_process | citrulline biosynthetic process |
B | 0042450 | biological_process | arginine biosynthetic process via ornithine |
C | 0004585 | molecular_function | ornithine carbamoyltransferase activity |
C | 0005737 | cellular_component | cytoplasm |
C | 0006520 | biological_process | amino acid metabolic process |
C | 0006526 | biological_process | L-arginine biosynthetic process |
C | 0006591 | biological_process | ornithine metabolic process |
C | 0016597 | molecular_function | amino acid binding |
C | 0016740 | molecular_function | transferase activity |
C | 0016743 | molecular_function | carboxyl- or carbamoyltransferase activity |
C | 0019240 | biological_process | citrulline biosynthetic process |
C | 0042450 | biological_process | arginine biosynthetic process via ornithine |
D | 0004585 | molecular_function | ornithine carbamoyltransferase activity |
D | 0005737 | cellular_component | cytoplasm |
D | 0006520 | biological_process | amino acid metabolic process |
D | 0006526 | biological_process | L-arginine biosynthetic process |
D | 0006591 | biological_process | ornithine metabolic process |
D | 0016597 | molecular_function | amino acid binding |
D | 0016740 | molecular_function | transferase activity |
D | 0016743 | molecular_function | carboxyl- or carbamoyltransferase activity |
D | 0019240 | biological_process | citrulline biosynthetic process |
D | 0042450 | biological_process | arginine biosynthetic process via ornithine |
E | 0004585 | molecular_function | ornithine carbamoyltransferase activity |
E | 0005737 | cellular_component | cytoplasm |
E | 0006520 | biological_process | amino acid metabolic process |
E | 0006526 | biological_process | L-arginine biosynthetic process |
E | 0006591 | biological_process | ornithine metabolic process |
E | 0016597 | molecular_function | amino acid binding |
E | 0016740 | molecular_function | transferase activity |
E | 0016743 | molecular_function | carboxyl- or carbamoyltransferase activity |
E | 0019240 | biological_process | citrulline biosynthetic process |
E | 0042450 | biological_process | arginine biosynthetic process via ornithine |
F | 0004585 | molecular_function | ornithine carbamoyltransferase activity |
F | 0005737 | cellular_component | cytoplasm |
F | 0006520 | biological_process | amino acid metabolic process |
F | 0006526 | biological_process | L-arginine biosynthetic process |
F | 0006591 | biological_process | ornithine metabolic process |
F | 0016597 | molecular_function | amino acid binding |
F | 0016740 | molecular_function | transferase activity |
F | 0016743 | molecular_function | carboxyl- or carbamoyltransferase activity |
F | 0019240 | biological_process | citrulline biosynthetic process |
F | 0042450 | biological_process | arginine biosynthetic process via ornithine |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 4 |
Details | binding site for residue UK2 A 401 |
Chain | Residue |
A | THR87 |
A | UK2405 |
A | HOH587 |
C | ARG52 |
site_id | AC2 |
Number of Residues | 5 |
Details | binding site for residue PO4 A 402 |
Chain | Residue |
A | ASN248 |
A | SER249 |
A | THR274 |
A | HOH524 |
A | HOH551 |
site_id | AC3 |
Number of Residues | 6 |
Details | binding site for residue PO4 A 403 |
Chain | Residue |
A | SER50 |
A | LEU123 |
A | HOH503 |
A | HOH620 |
A | HOH626 |
A | HOH716 |
site_id | AC4 |
Number of Residues | 9 |
Details | binding site for residue PO4 A 404 |
Chain | Residue |
A | HIS67 |
A | HOH504 |
A | HOH506 |
A | HOH526 |
A | HOH536 |
A | HOH549 |
A | HOH581 |
B | HIS67 |
C | HIS67 |
site_id | AC5 |
Number of Residues | 9 |
Details | binding site for residue UK2 A 405 |
Chain | Residue |
A | GLU82 |
A | VAL90 |
A | TYR94 |
A | UK2401 |
A | HOH599 |
C | ARG52 |
C | PHE55 |
C | LEU265 |
C | ARG292 |
site_id | AC6 |
Number of Residues | 8 |
Details | binding site for residue UK2 B 501 |
Chain | Residue |
A | ARG52 |
A | PHE55 |
A | LEU265 |
A | ALA289 |
A | ARG292 |
B | GLU82 |
B | VAL90 |
B | TYR94 |
site_id | AC7 |
Number of Residues | 6 |
Details | binding site for residue PO4 B 502 |
Chain | Residue |
B | ASN248 |
B | SER249 |
B | ARG250 |
B | THR274 |
B | HOH684 |
E | GLY235 |
site_id | AC8 |
Number of Residues | 7 |
Details | binding site for residue UK2 C 401 |
Chain | Residue |
B | ARG52 |
B | LEU265 |
B | ALA289 |
B | ARG292 |
C | GLU82 |
C | VAL90 |
C | TYR94 |
site_id | AC9 |
Number of Residues | 6 |
Details | binding site for residue PO4 C 402 |
Chain | Residue |
C | SER50 |
C | PRO266 |
C | HOH504 |
C | HOH537 |
C | HOH609 |
C | HOH611 |
site_id | AD1 |
Number of Residues | 8 |
Details | binding site for residue UK2 D 401 |
Chain | Residue |
D | ARG52 |
D | ALA289 |
D | ARG292 |
D | HOH520 |
D | HOH637 |
E | GLU82 |
E | VAL90 |
E | TYR94 |
site_id | AD2 |
Number of Residues | 4 |
Details | binding site for residue PO4 D 402 |
Chain | Residue |
D | SER249 |
D | THR274 |
D | HOH548 |
D | HOH635 |
site_id | AD3 |
Number of Residues | 4 |
Details | binding site for residue PO4 D 403 |
Chain | Residue |
D | SER50 |
D | HOH502 |
D | HOH560 |
D | HOH563 |
site_id | AD4 |
Number of Residues | 7 |
Details | binding site for residue UK2 D 404 |
Chain | Residue |
D | GLU82 |
D | VAL90 |
D | TYR94 |
F | ARG52 |
F | ALA289 |
F | ARG292 |
F | HOH607 |
site_id | AD5 |
Number of Residues | 5 |
Details | binding site for residue PO4 E 501 |
Chain | Residue |
E | ASN248 |
E | SER249 |
E | THR274 |
E | HOH646 |
E | HOH653 |
site_id | AD6 |
Number of Residues | 4 |
Details | binding site for residue PO4 E 502 |
Chain | Residue |
E | SER50 |
E | LEU123 |
E | HOH601 |
E | HOH720 |
site_id | AD7 |
Number of Residues | 8 |
Details | binding site for residue UK2 F 401 |
Chain | Residue |
F | UK2402 |
E | ARG52 |
E | ALA289 |
E | ARG292 |
E | HOH692 |
F | GLU82 |
F | VAL90 |
F | TYR94 |
site_id | AD8 |
Number of Residues | 10 |
Details | binding site for residue UK2 F 402 |
Chain | Residue |
E | ARG52 |
E | PHE55 |
E | HOH738 |
F | ILE45 |
F | SER75 |
F | THR76 |
F | LEU78 |
F | GLU82 |
F | THR87 |
F | UK2401 |
Functional Information from PROSITE/UniProt
site_id | PS00097 |
Number of Residues | 8 |
Details | CARBAMOYLTRANSFERASE Aspartate and ornithine carbamoyltransferases signature. FdKnSTRT |
Chain | Residue | Details |
A | PHE46-THR53 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 54 |
Details | BINDING: BINDING => ECO:0000269|PubMed:18062991, ECO:0007744|PDB:2I6U |
Chain | Residue | Details |
A | SER50 | |
B | SER50 | |
B | GLN77 | |
B | ARG101 | |
B | HIS128 | |
B | ASN160 | |
B | ASP224 | |
B | SER228 | |
B | CYS264 | |
B | ARG292 | |
C | SER50 | |
A | GLN77 | |
C | GLN77 | |
C | ARG101 | |
C | HIS128 | |
C | ASN160 | |
C | ASP224 | |
C | SER228 | |
C | CYS264 | |
C | ARG292 | |
D | SER50 | |
D | GLN77 | |
A | ARG101 | |
D | ARG101 | |
D | HIS128 | |
D | ASN160 | |
D | ASP224 | |
D | SER228 | |
D | CYS264 | |
D | ARG292 | |
E | SER50 | |
E | GLN77 | |
E | ARG101 | |
A | HIS128 | |
E | HIS128 | |
E | ASN160 | |
E | ASP224 | |
E | SER228 | |
E | CYS264 | |
E | ARG292 | |
F | SER50 | |
F | GLN77 | |
F | ARG101 | |
F | HIS128 | |
A | ASN160 | |
F | ASN160 | |
F | ASP224 | |
F | SER228 | |
F | CYS264 | |
F | ARG292 | |
A | ASP224 | |
A | SER228 | |
A | CYS264 | |
A | ARG292 |