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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

7NHF

Crystal structure of Arabidopsis thaliana Pdx1K166R

Functional Information from GO Data
ChainGOidnamespacecontents
A0005515molecular_functionprotein binding
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0005886cellular_componentplasma membrane
A0006520biological_processamino acid metabolic process
A0006979biological_processresponse to oxidative stress
A0006982biological_processresponse to lipid hydroperoxide
A0008615biological_processpyridoxine biosynthetic process
A0009651biological_processresponse to salt stress
A0010224biological_processresponse to UV-B
A0010335biological_processresponse to non-ionic osmotic stress
A0012505cellular_componentendomembrane system
A0015994biological_processchlorophyll metabolic process
A0016020cellular_componentmembrane
A0016829molecular_functionlyase activity
A0016843molecular_functionamine-lyase activity
A0036381molecular_functionpyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity
A0042538biological_processhyperosmotic salinity response
A0042803molecular_functionprotein homodimerization activity
A0042819biological_processvitamin B6 biosynthetic process
A0042823biological_processpyridoxal phosphate biosynthetic process
A0046982molecular_functionprotein heterodimerization activity
B0005515molecular_functionprotein binding
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0005886cellular_componentplasma membrane
B0006520biological_processamino acid metabolic process
B0006979biological_processresponse to oxidative stress
B0006982biological_processresponse to lipid hydroperoxide
B0008615biological_processpyridoxine biosynthetic process
B0009651biological_processresponse to salt stress
B0010224biological_processresponse to UV-B
B0010335biological_processresponse to non-ionic osmotic stress
B0012505cellular_componentendomembrane system
B0015994biological_processchlorophyll metabolic process
B0016020cellular_componentmembrane
B0016829molecular_functionlyase activity
B0016843molecular_functionamine-lyase activity
B0036381molecular_functionpyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity
B0042538biological_processhyperosmotic salinity response
B0042803molecular_functionprotein homodimerization activity
B0042819biological_processvitamin B6 biosynthetic process
B0042823biological_processpyridoxal phosphate biosynthetic process
B0046982molecular_functionprotein heterodimerization activity
C0005515molecular_functionprotein binding
C0005737cellular_componentcytoplasm
C0005829cellular_componentcytosol
C0005886cellular_componentplasma membrane
C0006520biological_processamino acid metabolic process
C0006979biological_processresponse to oxidative stress
C0006982biological_processresponse to lipid hydroperoxide
C0008615biological_processpyridoxine biosynthetic process
C0009651biological_processresponse to salt stress
C0010224biological_processresponse to UV-B
C0010335biological_processresponse to non-ionic osmotic stress
C0012505cellular_componentendomembrane system
C0015994biological_processchlorophyll metabolic process
C0016020cellular_componentmembrane
C0016829molecular_functionlyase activity
C0016843molecular_functionamine-lyase activity
C0036381molecular_functionpyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity
C0042538biological_processhyperosmotic salinity response
C0042803molecular_functionprotein homodimerization activity
C0042819biological_processvitamin B6 biosynthetic process
C0042823biological_processpyridoxal phosphate biosynthetic process
C0046982molecular_functionprotein heterodimerization activity
D0005515molecular_functionprotein binding
D0005737cellular_componentcytoplasm
D0005829cellular_componentcytosol
D0005886cellular_componentplasma membrane
D0006520biological_processamino acid metabolic process
D0006979biological_processresponse to oxidative stress
D0006982biological_processresponse to lipid hydroperoxide
D0008615biological_processpyridoxine biosynthetic process
D0009651biological_processresponse to salt stress
D0010224biological_processresponse to UV-B
D0010335biological_processresponse to non-ionic osmotic stress
D0012505cellular_componentendomembrane system
D0015994biological_processchlorophyll metabolic process
D0016020cellular_componentmembrane
D0016829molecular_functionlyase activity
D0016843molecular_functionamine-lyase activity
D0036381molecular_functionpyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity
D0042538biological_processhyperosmotic salinity response
D0042803molecular_functionprotein homodimerization activity
D0042819biological_processvitamin B6 biosynthetic process
D0042823biological_processpyridoxal phosphate biosynthetic process
D0046982molecular_functionprotein heterodimerization activity
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue PO4 A 301
ChainResidue
AHIS132
AARG154
AARG155
DLYS204
site_idAC2
Number of Residues5
Detailsbinding site for residue PO4 B 301
ChainResidue
BHIS132
BGLU151
BARG154
BARG155
CLYS204
site_idAC3
Number of Residues3
Detailsbinding site for residue PO4 C 301
ChainResidue
BLYS204
CARG154
CARG155
site_idAC4
Number of Residues4
Detailsbinding site for residue PO4 D 301
ChainResidue
ALYS204
DHIS132
DARG154
DARG155
Functional Information from PROSITE/UniProt
site_idPS01235
Number of Residues19
DetailsPDXS_SNZ_1 PdxS/SNZ family signature. LPVVQFAAGGVATPADAAL
ChainResidueDetails
ALEU222-LEU240
Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsActive site: {"description":"Schiff-base intermediate with D-ribose 5-phosphate","evidences":[{"source":"UniProtKB","id":"O59080","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails
site_idSWS_FT_FI2
Number of Residues16
DetailsBinding site: {"evidences":[{"source":"UniProtKB","id":"O59080","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails
site_idSWS_FT_FI3
Number of Residues4
DetailsBinding site: {"evidences":[{"source":"UniProtKB","id":"Q03148","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

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PDB entries from 2025-10-22

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