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7MLT

Crystal structure of ricin A chain in complex with 5-(2-ethylphenyl)thiophene-2-carboxylic acid

Functional Information from GO Data
ChainGOidnamespacecontents
A0017148biological_processnegative regulation of translation
A0030598molecular_functionrRNA N-glycosylase activity
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue CL A 301
ChainResidue
AASN132
ALEU133
AASN136
AHOH646

site_idAC2
Number of Residues3
Detailsbinding site for residue CL A 303
ChainResidue
AARG114
AHOH455
AHOH474

site_idAC3
Number of Residues3
Detailsbinding site for residue EDO A 304
ChainResidue
AHOH497
AILE8
AARG31

site_idAC4
Number of Residues1
Detailsbinding site for residue EDO A 305
ChainResidue
AHOH576

site_idAC5
Number of Residues4
Detailsbinding site for residue EDO A 306
ChainResidue
AHIS94
APRO95
AASN97
AGLN98

site_idAC6
Number of Residues8
Detailsbinding site for residue EDO A 307
ChainResidue
AGLY186
AGLU187
ATHR190
AARG235
ASER246
AILE249
AHOH498
AHOH528

site_idAC7
Number of Residues3
Detailsbinding site for residue EDO A 308
ChainResidue
AASN78
AARG258
AHOH475

site_idAC8
Number of Residues4
Detailsbinding site for residue EDO A 309
ChainResidue
AGLN128
AGLY131
AEDO321
AHOH516

site_idAC9
Number of Residues8
Detailsbinding site for residue EDO A 310
ChainResidue
AASN141
AGLY142
APRO143
AASN195
AARG196
AARG197
AHOH401
AHOH535

site_idAD1
Number of Residues7
Detailsbinding site for residue EDO A 311
ChainResidue
AGLN19
ATHR22
AVAL38
AHIS40
AILE42
APRO43
AHOH456

site_idAD2
Number of Residues4
Detailsbinding site for residue EDO A 312
ChainResidue
APHE119
AGLY120
AASN122
AARG125

site_idAD3
Number of Residues4
Detailsbinding site for residue EDO A 313
ChainResidue
APRO43
AARG189
AHOH403
AHOH410

site_idAD4
Number of Residues8
Detailsbinding site for residue EDO A 314
ChainResidue
AGLU61
AGLU67
ASER69
AVAL70
ATHR71
AARG85
AALA86
AGLY87

site_idAD5
Number of Residues7
Detailsbinding site for residue EDO A 315
ChainResidue
APHE117
APHE119
ATYR154
AGLN160
ALEU161
AHOH477
AHOH580

site_idAD6
Number of Residues4
Detailsbinding site for residue EDO A 316
ChainResidue
AASN23
AARG26
AALA27
AHOH437

site_idAD7
Number of Residues5
Detailsbinding site for residue EDO A 317
ChainResidue
AGLN182
AGLN182
AILE249
APRO250
AHOH420

site_idAD8
Number of Residues6
Detailsbinding site for residue EDO A 318
ChainResidue
AASN136
AILE137
AGLU138
AARG166
AHOH431
AHOH534

site_idAD9
Number of Residues8
Detailsbinding site for residue EDO A 319
ChainResidue
AGLU146
ATHR163
AARG166
ASER167
AILE170
AHOH503
AHOH532
AHOH534

site_idAE1
Number of Residues7
Detailsbinding site for residue EDO A 320
ChainResidue
AGLU135
APRO200
AASP201
APRO202
AHOH493
AHOH579
AHOH627

site_idAE2
Number of Residues5
Detailsbinding site for residue EDO A 321
ChainResidue
AGLN128
ALEU133
AEDO309
AHOH545
AGLN128

site_idAE3
Number of Residues7
Detailsbinding site for residue ZJD A 322
ChainResidue
ATYR183
AARG234
AARG235
APHE240
AILE247
AILE247
AHOH525

Functional Information from PROSITE/UniProt
site_idPS00275
Number of Residues17
DetailsSHIGA_RICIN Shiga/ricin ribosomal inactivating toxins active site signature. IqMIsEAARFQyIEgeM
ChainResidueDetails
AILE172-MET188

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsActive site: {"evidences":[{"source":"UniProtKB","id":"P84531","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues2
DetailsBinding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues9
DetailsBinding site: {}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues3
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"8780513","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1OBT","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues1
DetailsGlycosylation: {"description":"N-linked (GlcNAc...) asparagine","featureId":"CAR_000080","evidences":[{"source":"PubMed","id":"1368517","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues1
DetailsGlycosylation: {"description":"N-linked (GlcNAc...) asparagine; partial","featureId":"CAR_000081","evidences":[{"source":"PubMed","id":"1368517","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

246704

PDB entries from 2025-12-24

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