7MEI

Composite structure of EC+EC

Functional Information from GO Data

Chain	GOid	namespace	contents
a	0000428	cellular_component	DNA-directed RNA polymerase complex
a	0001172	biological_process	RNA-templated transcription
a	0003677	molecular_function	DNA binding
a	0003899	molecular_function	DNA-directed RNA polymerase activity
a	0003968	molecular_function	RNA-directed RNA polymerase activity
a	0005515	molecular_function	protein binding
a	0005634	cellular_component	nucleus
a	0005665	cellular_component	RNA polymerase II, core complex
a	0005739	cellular_component	mitochondrion
a	0006351	biological_process	DNA-templated transcription
a	0006366	biological_process	transcription by RNA polymerase II
a	0006367	biological_process	transcription initiation at RNA polymerase II promoter
a	0006368	biological_process	transcription elongation by RNA polymerase II
a	0006369	biological_process	termination of RNA polymerase II transcription
a	0008270	molecular_function	zinc ion binding
a	0010494	cellular_component	cytoplasmic stress granule
a	0016740	molecular_function	transferase activity
a	0016779	molecular_function	nucleotidyltransferase activity
a	0019985	biological_process	translesion synthesis
a	0034062	molecular_function	5'-3' RNA polymerase activity
a	0042789	biological_process	mRNA transcription by RNA polymerase II
a	0046872	molecular_function	metal ion binding
A	0000428	cellular_component	DNA-directed RNA polymerase complex
A	0001172	biological_process	RNA-templated transcription
A	0003677	molecular_function	DNA binding
A	0003899	molecular_function	DNA-directed RNA polymerase activity
A	0003968	molecular_function	RNA-directed RNA polymerase activity
A	0005515	molecular_function	protein binding
A	0005634	cellular_component	nucleus
A	0005665	cellular_component	RNA polymerase II, core complex
A	0005739	cellular_component	mitochondrion
A	0006351	biological_process	DNA-templated transcription
A	0006366	biological_process	transcription by RNA polymerase II
A	0006367	biological_process	transcription initiation at RNA polymerase II promoter
A	0006368	biological_process	transcription elongation by RNA polymerase II
A	0006369	biological_process	termination of RNA polymerase II transcription
A	0008270	molecular_function	zinc ion binding
A	0010494	cellular_component	cytoplasmic stress granule
A	0016740	molecular_function	transferase activity
A	0016779	molecular_function	nucleotidyltransferase activity
A	0019985	biological_process	translesion synthesis
A	0034062	molecular_function	5'-3' RNA polymerase activity
A	0042789	biological_process	mRNA transcription by RNA polymerase II
A	0046872	molecular_function	metal ion binding
b	0000428	cellular_component	DNA-directed RNA polymerase complex
b	0001172	biological_process	RNA-templated transcription
b	0003676	molecular_function	nucleic acid binding
b	0003677	molecular_function	DNA binding
b	0003729	molecular_function	mRNA binding
b	0003899	molecular_function	DNA-directed RNA polymerase activity
b	0003968	molecular_function	RNA-directed RNA polymerase activity
b	0005515	molecular_function	protein binding
b	0005634	cellular_component	nucleus
b	0005665	cellular_component	RNA polymerase II, core complex
b	0005739	cellular_component	mitochondrion
b	0006351	biological_process	DNA-templated transcription
b	0006354	biological_process	DNA-templated transcription elongation
b	0006366	biological_process	transcription by RNA polymerase II
b	0006367	biological_process	transcription initiation at RNA polymerase II promoter
b	0006368	biological_process	transcription elongation by RNA polymerase II
b	0008270	molecular_function	zinc ion binding
b	0010494	cellular_component	cytoplasmic stress granule
b	0016740	molecular_function	transferase activity
b	0016779	molecular_function	nucleotidyltransferase activity
b	0032549	molecular_function	ribonucleoside binding
b	0034062	molecular_function	5'-3' RNA polymerase activity
b	0046872	molecular_function	metal ion binding
B	0000428	cellular_component	DNA-directed RNA polymerase complex
B	0001172	biological_process	RNA-templated transcription
B	0003676	molecular_function	nucleic acid binding
B	0003677	molecular_function	DNA binding
B	0003729	molecular_function	mRNA binding
B	0003899	molecular_function	DNA-directed RNA polymerase activity
B	0003968	molecular_function	RNA-directed RNA polymerase activity
B	0005515	molecular_function	protein binding
B	0005634	cellular_component	nucleus
B	0005665	cellular_component	RNA polymerase II, core complex
B	0005739	cellular_component	mitochondrion
B	0006351	biological_process	DNA-templated transcription
B	0006354	biological_process	DNA-templated transcription elongation
B	0006366	biological_process	transcription by RNA polymerase II
B	0006367	biological_process	transcription initiation at RNA polymerase II promoter
B	0006368	biological_process	transcription elongation by RNA polymerase II
B	0008270	molecular_function	zinc ion binding
B	0010494	cellular_component	cytoplasmic stress granule
B	0016740	molecular_function	transferase activity
B	0016779	molecular_function	nucleotidyltransferase activity
B	0032549	molecular_function	ribonucleoside binding
B	0034062	molecular_function	5'-3' RNA polymerase activity
B	0046872	molecular_function	metal ion binding
c	0000428	cellular_component	DNA-directed RNA polymerase complex
c	0001172	biological_process	RNA-templated transcription
c	0003677	molecular_function	DNA binding
c	0003899	molecular_function	DNA-directed RNA polymerase activity
c	0003968	molecular_function	RNA-directed RNA polymerase activity
c	0005515	molecular_function	protein binding
c	0005634	cellular_component	nucleus
c	0005654	cellular_component	nucleoplasm
c	0005665	cellular_component	RNA polymerase II, core complex
c	0006351	biological_process	DNA-templated transcription
c	0006366	biological_process	transcription by RNA polymerase II
c	0006367	biological_process	transcription initiation at RNA polymerase II promoter
c	0006368	biological_process	transcription elongation by RNA polymerase II
c	0006369	biological_process	termination of RNA polymerase II transcription
c	0008270	molecular_function	zinc ion binding
c	0046872	molecular_function	metal ion binding
c	0046983	molecular_function	protein dimerization activity
C	0000428	cellular_component	DNA-directed RNA polymerase complex
C	0001172	biological_process	RNA-templated transcription
C	0003677	molecular_function	DNA binding
C	0003899	molecular_function	DNA-directed RNA polymerase activity
C	0003968	molecular_function	RNA-directed RNA polymerase activity
C	0005515	molecular_function	protein binding
C	0005634	cellular_component	nucleus
C	0005654	cellular_component	nucleoplasm
C	0005665	cellular_component	RNA polymerase II, core complex
C	0006351	biological_process	DNA-templated transcription
C	0006366	biological_process	transcription by RNA polymerase II
C	0006367	biological_process	transcription initiation at RNA polymerase II promoter
C	0006368	biological_process	transcription elongation by RNA polymerase II
C	0006369	biological_process	termination of RNA polymerase II transcription
C	0008270	molecular_function	zinc ion binding
C	0046872	molecular_function	metal ion binding
C	0046983	molecular_function	protein dimerization activity
d	0000166	molecular_function	nucleotide binding
d	0000288	biological_process	nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
d	0000428	cellular_component	DNA-directed RNA polymerase complex
d	0000932	cellular_component	P-body
d	0001172	biological_process	RNA-templated transcription
d	0003697	molecular_function	single-stranded DNA binding
d	0003727	molecular_function	single-stranded RNA binding
d	0003968	molecular_function	RNA-directed RNA polymerase activity
d	0005515	molecular_function	protein binding
d	0005634	cellular_component	nucleus
d	0005665	cellular_component	RNA polymerase II, core complex
d	0005737	cellular_component	cytoplasm
d	0006352	biological_process	DNA-templated transcription initiation
d	0006366	biological_process	transcription by RNA polymerase II
d	0006367	biological_process	transcription initiation at RNA polymerase II promoter
d	0006368	biological_process	transcription elongation by RNA polymerase II
d	0006397	biological_process	mRNA processing
d	0030880	cellular_component	RNA polymerase complex
d	0031369	molecular_function	translation initiation factor binding
d	0045948	biological_process	positive regulation of translational initiation
D	0000166	molecular_function	nucleotide binding
D	0000288	biological_process	nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
D	0000428	cellular_component	DNA-directed RNA polymerase complex
D	0000932	cellular_component	P-body
D	0001172	biological_process	RNA-templated transcription
D	0003697	molecular_function	single-stranded DNA binding
D	0003727	molecular_function	single-stranded RNA binding
D	0003968	molecular_function	RNA-directed RNA polymerase activity
D	0005515	molecular_function	protein binding
D	0005634	cellular_component	nucleus
D	0005665	cellular_component	RNA polymerase II, core complex
D	0005737	cellular_component	cytoplasm
D	0006352	biological_process	DNA-templated transcription initiation
D	0006366	biological_process	transcription by RNA polymerase II
D	0006367	biological_process	transcription initiation at RNA polymerase II promoter
D	0006368	biological_process	transcription elongation by RNA polymerase II
D	0006397	biological_process	mRNA processing
D	0030880	cellular_component	RNA polymerase complex
D	0031369	molecular_function	translation initiation factor binding
D	0045948	biological_process	positive regulation of translational initiation
e	0000428	cellular_component	DNA-directed RNA polymerase complex
e	0001172	biological_process	RNA-templated transcription
e	0003677	molecular_function	DNA binding
e	0003899	molecular_function	DNA-directed RNA polymerase activity
e	0003968	molecular_function	RNA-directed RNA polymerase activity
e	0005515	molecular_function	protein binding
e	0005634	cellular_component	nucleus
e	0005654	cellular_component	nucleoplasm
e	0005665	cellular_component	RNA polymerase II, core complex
e	0005666	cellular_component	RNA polymerase III complex
e	0005736	cellular_component	RNA polymerase I complex
e	0006351	biological_process	DNA-templated transcription
e	0006360	biological_process	transcription by RNA polymerase I
e	0006361	biological_process	transcription initiation at RNA polymerase I promoter
e	0006362	biological_process	transcription elongation by RNA polymerase I
e	0006363	biological_process	termination of RNA polymerase I transcription
e	0006366	biological_process	transcription by RNA polymerase II
e	0006367	biological_process	transcription initiation at RNA polymerase II promoter
e	0006368	biological_process	transcription elongation by RNA polymerase II
e	0006383	biological_process	transcription by RNA polymerase III
e	0006384	biological_process	transcription initiation at RNA polymerase III promoter
e	0006386	biological_process	termination of RNA polymerase III transcription
e	0042254	biological_process	ribosome biogenesis
e	0042790	biological_process	nucleolar large rRNA transcription by RNA polymerase I
e	0042797	biological_process	tRNA transcription by RNA polymerase III
E	0000428	cellular_component	DNA-directed RNA polymerase complex
E	0001172	biological_process	RNA-templated transcription
E	0003677	molecular_function	DNA binding
E	0003899	molecular_function	DNA-directed RNA polymerase activity
E	0003968	molecular_function	RNA-directed RNA polymerase activity
E	0005515	molecular_function	protein binding
E	0005634	cellular_component	nucleus
E	0005654	cellular_component	nucleoplasm
E	0005665	cellular_component	RNA polymerase II, core complex
E	0005666	cellular_component	RNA polymerase III complex
E	0005736	cellular_component	RNA polymerase I complex
E	0006351	biological_process	DNA-templated transcription
E	0006360	biological_process	transcription by RNA polymerase I
E	0006361	biological_process	transcription initiation at RNA polymerase I promoter
E	0006362	biological_process	transcription elongation by RNA polymerase I
E	0006363	biological_process	termination of RNA polymerase I transcription
E	0006366	biological_process	transcription by RNA polymerase II
E	0006367	biological_process	transcription initiation at RNA polymerase II promoter
E	0006368	biological_process	transcription elongation by RNA polymerase II
E	0006383	biological_process	transcription by RNA polymerase III
E	0006384	biological_process	transcription initiation at RNA polymerase III promoter
E	0006386	biological_process	termination of RNA polymerase III transcription
E	0042254	biological_process	ribosome biogenesis
E	0042790	biological_process	nucleolar large rRNA transcription by RNA polymerase I
E	0042797	biological_process	tRNA transcription by RNA polymerase III
f	0000428	cellular_component	DNA-directed RNA polymerase complex
f	0001172	biological_process	RNA-templated transcription
f	0003677	molecular_function	DNA binding
f	0003899	molecular_function	DNA-directed RNA polymerase activity
f	0003968	molecular_function	RNA-directed RNA polymerase activity
f	0005515	molecular_function	protein binding
f	0005634	cellular_component	nucleus
f	0005654	cellular_component	nucleoplasm
f	0005665	cellular_component	RNA polymerase II, core complex
f	0005666	cellular_component	RNA polymerase III complex
f	0005736	cellular_component	RNA polymerase I complex
f	0005737	cellular_component	cytoplasm
f	0006351	biological_process	DNA-templated transcription
f	0006360	biological_process	transcription by RNA polymerase I
f	0006361	biological_process	transcription initiation at RNA polymerase I promoter
f	0006362	biological_process	transcription elongation by RNA polymerase I
f	0006363	biological_process	termination of RNA polymerase I transcription
f	0006366	biological_process	transcription by RNA polymerase II
f	0006367	biological_process	transcription initiation at RNA polymerase II promoter
f	0006368	biological_process	transcription elongation by RNA polymerase II
f	0006383	biological_process	transcription by RNA polymerase III
f	0006384	biological_process	transcription initiation at RNA polymerase III promoter
f	0006386	biological_process	termination of RNA polymerase III transcription
f	0042254	biological_process	ribosome biogenesis
f	0042790	biological_process	nucleolar large rRNA transcription by RNA polymerase I
f	0042797	biological_process	tRNA transcription by RNA polymerase III
F	0000428	cellular_component	DNA-directed RNA polymerase complex
F	0001172	biological_process	RNA-templated transcription
F	0003677	molecular_function	DNA binding
F	0003899	molecular_function	DNA-directed RNA polymerase activity
F	0003968	molecular_function	RNA-directed RNA polymerase activity
F	0005515	molecular_function	protein binding
F	0005634	cellular_component	nucleus
F	0005654	cellular_component	nucleoplasm
F	0005665	cellular_component	RNA polymerase II, core complex
F	0005666	cellular_component	RNA polymerase III complex
F	0005736	cellular_component	RNA polymerase I complex
F	0005737	cellular_component	cytoplasm
F	0006351	biological_process	DNA-templated transcription
F	0006360	biological_process	transcription by RNA polymerase I
F	0006361	biological_process	transcription initiation at RNA polymerase I promoter
F	0006362	biological_process	transcription elongation by RNA polymerase I
F	0006363	biological_process	termination of RNA polymerase I transcription
F	0006366	biological_process	transcription by RNA polymerase II
F	0006367	biological_process	transcription initiation at RNA polymerase II promoter
F	0006368	biological_process	transcription elongation by RNA polymerase II
F	0006383	biological_process	transcription by RNA polymerase III
F	0006384	biological_process	transcription initiation at RNA polymerase III promoter
F	0006386	biological_process	termination of RNA polymerase III transcription
F	0042254	biological_process	ribosome biogenesis
F	0042790	biological_process	nucleolar large rRNA transcription by RNA polymerase I
F	0042797	biological_process	tRNA transcription by RNA polymerase III
g	0000288	biological_process	nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
g	0000428	cellular_component	DNA-directed RNA polymerase complex
g	0000932	cellular_component	P-body
g	0000956	biological_process	nuclear-transcribed mRNA catabolic process
g	0001172	biological_process	RNA-templated transcription
g	0003676	molecular_function	nucleic acid binding
g	0003697	molecular_function	single-stranded DNA binding
g	0003727	molecular_function	single-stranded RNA binding
g	0003968	molecular_function	RNA-directed RNA polymerase activity
g	0005515	molecular_function	protein binding
g	0005634	cellular_component	nucleus
g	0005665	cellular_component	RNA polymerase II, core complex
g	0005737	cellular_component	cytoplasm
g	0006351	biological_process	DNA-templated transcription
g	0006352	biological_process	DNA-templated transcription initiation
g	0006366	biological_process	transcription by RNA polymerase II
g	0006367	biological_process	transcription initiation at RNA polymerase II promoter
g	0006368	biological_process	transcription elongation by RNA polymerase II
g	0031369	molecular_function	translation initiation factor binding
g	0045948	biological_process	positive regulation of translational initiation
g	0060213	biological_process	positive regulation of nuclear-transcribed mRNA poly(A) tail shortening
G	0000288	biological_process	nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
G	0000428	cellular_component	DNA-directed RNA polymerase complex
G	0000932	cellular_component	P-body
G	0000956	biological_process	nuclear-transcribed mRNA catabolic process
G	0001172	biological_process	RNA-templated transcription
G	0003676	molecular_function	nucleic acid binding
G	0003697	molecular_function	single-stranded DNA binding
G	0003727	molecular_function	single-stranded RNA binding
G	0003968	molecular_function	RNA-directed RNA polymerase activity
G	0005515	molecular_function	protein binding
G	0005634	cellular_component	nucleus
G	0005665	cellular_component	RNA polymerase II, core complex
G	0005737	cellular_component	cytoplasm
G	0006351	biological_process	DNA-templated transcription
G	0006352	biological_process	DNA-templated transcription initiation
G	0006366	biological_process	transcription by RNA polymerase II
G	0006367	biological_process	transcription initiation at RNA polymerase II promoter
G	0006368	biological_process	transcription elongation by RNA polymerase II
G	0031369	molecular_function	translation initiation factor binding
G	0045948	biological_process	positive regulation of translational initiation
G	0060213	biological_process	positive regulation of nuclear-transcribed mRNA poly(A) tail shortening
h	0000428	cellular_component	DNA-directed RNA polymerase complex
h	0001172	biological_process	RNA-templated transcription
h	0003677	molecular_function	DNA binding
h	0003899	molecular_function	DNA-directed RNA polymerase activity
h	0003968	molecular_function	RNA-directed RNA polymerase activity
h	0005515	molecular_function	protein binding
h	0005634	cellular_component	nucleus
h	0005654	cellular_component	nucleoplasm
h	0005665	cellular_component	RNA polymerase II, core complex
h	0005666	cellular_component	RNA polymerase III complex
h	0005736	cellular_component	RNA polymerase I complex
h	0006351	biological_process	DNA-templated transcription
h	0006360	biological_process	transcription by RNA polymerase I
h	0006361	biological_process	transcription initiation at RNA polymerase I promoter
h	0006362	biological_process	transcription elongation by RNA polymerase I
h	0006363	biological_process	termination of RNA polymerase I transcription
h	0006366	biological_process	transcription by RNA polymerase II
h	0006367	biological_process	transcription initiation at RNA polymerase II promoter
h	0006368	biological_process	transcription elongation by RNA polymerase II
h	0006383	biological_process	transcription by RNA polymerase III
h	0006384	biological_process	transcription initiation at RNA polymerase III promoter
h	0006386	biological_process	termination of RNA polymerase III transcription
h	0042254	biological_process	ribosome biogenesis
h	0042790	biological_process	nucleolar large rRNA transcription by RNA polymerase I
h	0042797	biological_process	tRNA transcription by RNA polymerase III
H	0000428	cellular_component	DNA-directed RNA polymerase complex
H	0001172	biological_process	RNA-templated transcription
H	0003677	molecular_function	DNA binding
H	0003899	molecular_function	DNA-directed RNA polymerase activity
H	0003968	molecular_function	RNA-directed RNA polymerase activity
H	0005515	molecular_function	protein binding
H	0005634	cellular_component	nucleus
H	0005654	cellular_component	nucleoplasm
H	0005665	cellular_component	RNA polymerase II, core complex
H	0005666	cellular_component	RNA polymerase III complex
H	0005736	cellular_component	RNA polymerase I complex
H	0006351	biological_process	DNA-templated transcription
H	0006360	biological_process	transcription by RNA polymerase I
H	0006361	biological_process	transcription initiation at RNA polymerase I promoter
H	0006362	biological_process	transcription elongation by RNA polymerase I
H	0006363	biological_process	termination of RNA polymerase I transcription
H	0006366	biological_process	transcription by RNA polymerase II
H	0006367	biological_process	transcription initiation at RNA polymerase II promoter
H	0006368	biological_process	transcription elongation by RNA polymerase II
H	0006383	biological_process	transcription by RNA polymerase III
H	0006384	biological_process	transcription initiation at RNA polymerase III promoter
H	0006386	biological_process	termination of RNA polymerase III transcription
H	0042254	biological_process	ribosome biogenesis
H	0042790	biological_process	nucleolar large rRNA transcription by RNA polymerase I
H	0042797	biological_process	tRNA transcription by RNA polymerase III
i	0000428	cellular_component	DNA-directed RNA polymerase complex
i	0001172	biological_process	RNA-templated transcription
i	0001193	biological_process	maintenance of transcriptional fidelity during transcription elongation by RNA polymerase II
i	0003676	molecular_function	nucleic acid binding
i	0003899	molecular_function	DNA-directed RNA polymerase activity
i	0003968	molecular_function	RNA-directed RNA polymerase activity
i	0005515	molecular_function	protein binding
i	0005634	cellular_component	nucleus
i	0005665	cellular_component	RNA polymerase II, core complex
i	0005730	cellular_component	nucleolus
i	0006281	biological_process	DNA repair
i	0006283	biological_process	transcription-coupled nucleotide-excision repair
i	0006351	biological_process	DNA-templated transcription
i	0006366	biological_process	transcription by RNA polymerase II
i	0006367	biological_process	transcription initiation at RNA polymerase II promoter
i	0006368	biological_process	transcription elongation by RNA polymerase II
i	0006974	biological_process	DNA damage response
i	0008270	molecular_function	zinc ion binding
i	0046872	molecular_function	metal ion binding
I	0000428	cellular_component	DNA-directed RNA polymerase complex
I	0001172	biological_process	RNA-templated transcription
I	0001193	biological_process	maintenance of transcriptional fidelity during transcription elongation by RNA polymerase II
I	0003676	molecular_function	nucleic acid binding
I	0003899	molecular_function	DNA-directed RNA polymerase activity
I	0003968	molecular_function	RNA-directed RNA polymerase activity
I	0005515	molecular_function	protein binding
I	0005634	cellular_component	nucleus
I	0005665	cellular_component	RNA polymerase II, core complex
I	0005730	cellular_component	nucleolus
I	0006281	biological_process	DNA repair
I	0006283	biological_process	transcription-coupled nucleotide-excision repair
I	0006351	biological_process	DNA-templated transcription
I	0006366	biological_process	transcription by RNA polymerase II
I	0006367	biological_process	transcription initiation at RNA polymerase II promoter
I	0006368	biological_process	transcription elongation by RNA polymerase II
I	0006974	biological_process	DNA damage response
I	0008270	molecular_function	zinc ion binding
I	0046872	molecular_function	metal ion binding
j	0000428	cellular_component	DNA-directed RNA polymerase complex
j	0001172	biological_process	RNA-templated transcription
j	0003677	molecular_function	DNA binding
j	0003899	molecular_function	DNA-directed RNA polymerase activity
j	0003968	molecular_function	RNA-directed RNA polymerase activity
j	0005515	molecular_function	protein binding
j	0005634	cellular_component	nucleus
j	0005654	cellular_component	nucleoplasm
j	0005665	cellular_component	RNA polymerase II, core complex
j	0005666	cellular_component	RNA polymerase III complex
j	0005730	cellular_component	nucleolus
j	0005736	cellular_component	RNA polymerase I complex
j	0006351	biological_process	DNA-templated transcription
j	0006360	biological_process	transcription by RNA polymerase I
j	0006361	biological_process	transcription initiation at RNA polymerase I promoter
j	0006362	biological_process	transcription elongation by RNA polymerase I
j	0006363	biological_process	termination of RNA polymerase I transcription
j	0006366	biological_process	transcription by RNA polymerase II
j	0006367	biological_process	transcription initiation at RNA polymerase II promoter
j	0006368	biological_process	transcription elongation by RNA polymerase II
j	0006383	biological_process	transcription by RNA polymerase III
j	0006384	biological_process	transcription initiation at RNA polymerase III promoter
j	0006386	biological_process	termination of RNA polymerase III transcription
j	0008270	molecular_function	zinc ion binding
j	0042254	biological_process	ribosome biogenesis
j	0042790	biological_process	nucleolar large rRNA transcription by RNA polymerase I
j	0042797	biological_process	tRNA transcription by RNA polymerase III
j	0046872	molecular_function	metal ion binding
J	0000428	cellular_component	DNA-directed RNA polymerase complex
J	0001172	biological_process	RNA-templated transcription
J	0003677	molecular_function	DNA binding
J	0003899	molecular_function	DNA-directed RNA polymerase activity
J	0003968	molecular_function	RNA-directed RNA polymerase activity
J	0005515	molecular_function	protein binding
J	0005634	cellular_component	nucleus
J	0005654	cellular_component	nucleoplasm
J	0005665	cellular_component	RNA polymerase II, core complex
J	0005666	cellular_component	RNA polymerase III complex
J	0005730	cellular_component	nucleolus
J	0005736	cellular_component	RNA polymerase I complex
J	0006351	biological_process	DNA-templated transcription
J	0006360	biological_process	transcription by RNA polymerase I
J	0006361	biological_process	transcription initiation at RNA polymerase I promoter
J	0006362	biological_process	transcription elongation by RNA polymerase I
J	0006363	biological_process	termination of RNA polymerase I transcription
J	0006366	biological_process	transcription by RNA polymerase II
J	0006367	biological_process	transcription initiation at RNA polymerase II promoter
J	0006368	biological_process	transcription elongation by RNA polymerase II
J	0006383	biological_process	transcription by RNA polymerase III
J	0006384	biological_process	transcription initiation at RNA polymerase III promoter
J	0006386	biological_process	termination of RNA polymerase III transcription
J	0008270	molecular_function	zinc ion binding
J	0042254	biological_process	ribosome biogenesis
J	0042790	biological_process	nucleolar large rRNA transcription by RNA polymerase I
J	0042797	biological_process	tRNA transcription by RNA polymerase III
J	0046872	molecular_function	metal ion binding
k	0000428	cellular_component	DNA-directed RNA polymerase complex
k	0001172	biological_process	RNA-templated transcription
k	0003677	molecular_function	DNA binding
k	0003899	molecular_function	DNA-directed RNA polymerase activity
k	0003968	molecular_function	RNA-directed RNA polymerase activity
k	0005515	molecular_function	protein binding
k	0005634	cellular_component	nucleus
k	0005665	cellular_component	RNA polymerase II, core complex
k	0006351	biological_process	DNA-templated transcription
k	0006366	biological_process	transcription by RNA polymerase II
k	0006367	biological_process	transcription initiation at RNA polymerase II promoter
k	0006368	biological_process	transcription elongation by RNA polymerase II
k	0006369	biological_process	termination of RNA polymerase II transcription
k	0046983	molecular_function	protein dimerization activity
K	0000428	cellular_component	DNA-directed RNA polymerase complex
K	0001172	biological_process	RNA-templated transcription
K	0003677	molecular_function	DNA binding
K	0003899	molecular_function	DNA-directed RNA polymerase activity
K	0003968	molecular_function	RNA-directed RNA polymerase activity
K	0005515	molecular_function	protein binding
K	0005634	cellular_component	nucleus
K	0005665	cellular_component	RNA polymerase II, core complex
K	0006351	biological_process	DNA-templated transcription
K	0006366	biological_process	transcription by RNA polymerase II
K	0006367	biological_process	transcription initiation at RNA polymerase II promoter
K	0006368	biological_process	transcription elongation by RNA polymerase II
K	0006369	biological_process	termination of RNA polymerase II transcription
K	0046983	molecular_function	protein dimerization activity
l	0000428	cellular_component	DNA-directed RNA polymerase complex
l	0001172	biological_process	RNA-templated transcription
l	0003677	molecular_function	DNA binding
l	0003899	molecular_function	DNA-directed RNA polymerase activity
l	0003968	molecular_function	RNA-directed RNA polymerase activity
l	0005515	molecular_function	protein binding
l	0005634	cellular_component	nucleus
l	0005654	cellular_component	nucleoplasm
l	0005665	cellular_component	RNA polymerase II, core complex
l	0005666	cellular_component	RNA polymerase III complex
l	0005730	cellular_component	nucleolus
l	0005736	cellular_component	RNA polymerase I complex
l	0005737	cellular_component	cytoplasm
l	0005777	cellular_component	peroxisome
l	0006351	biological_process	DNA-templated transcription
l	0006360	biological_process	transcription by RNA polymerase I
l	0006361	biological_process	transcription initiation at RNA polymerase I promoter
l	0006362	biological_process	transcription elongation by RNA polymerase I
l	0006363	biological_process	termination of RNA polymerase I transcription
l	0006366	biological_process	transcription by RNA polymerase II
l	0006367	biological_process	transcription initiation at RNA polymerase II promoter
l	0006368	biological_process	transcription elongation by RNA polymerase II
l	0006383	biological_process	transcription by RNA polymerase III
l	0006384	biological_process	transcription initiation at RNA polymerase III promoter
l	0006386	biological_process	termination of RNA polymerase III transcription
l	0008270	molecular_function	zinc ion binding
l	0042254	biological_process	ribosome biogenesis
l	0042790	biological_process	nucleolar large rRNA transcription by RNA polymerase I
l	0042797	biological_process	tRNA transcription by RNA polymerase III
l	0046872	molecular_function	metal ion binding
L	0000428	cellular_component	DNA-directed RNA polymerase complex
L	0001172	biological_process	RNA-templated transcription
L	0003677	molecular_function	DNA binding
L	0003899	molecular_function	DNA-directed RNA polymerase activity
L	0003968	molecular_function	RNA-directed RNA polymerase activity
L	0005515	molecular_function	protein binding
L	0005634	cellular_component	nucleus
L	0005654	cellular_component	nucleoplasm
L	0005665	cellular_component	RNA polymerase II, core complex
L	0005666	cellular_component	RNA polymerase III complex
L	0005730	cellular_component	nucleolus
L	0005736	cellular_component	RNA polymerase I complex
L	0005737	cellular_component	cytoplasm
L	0005777	cellular_component	peroxisome
L	0006351	biological_process	DNA-templated transcription
L	0006360	biological_process	transcription by RNA polymerase I
L	0006361	biological_process	transcription initiation at RNA polymerase I promoter
L	0006362	biological_process	transcription elongation by RNA polymerase I
L	0006363	biological_process	termination of RNA polymerase I transcription
L	0006366	biological_process	transcription by RNA polymerase II
L	0006367	biological_process	transcription initiation at RNA polymerase II promoter
L	0006368	biological_process	transcription elongation by RNA polymerase II
L	0006383	biological_process	transcription by RNA polymerase III
L	0006384	biological_process	transcription initiation at RNA polymerase III promoter
L	0006386	biological_process	termination of RNA polymerase III transcription
L	0008270	molecular_function	zinc ion binding
L	0042254	biological_process	ribosome biogenesis
L	0042790	biological_process	nucleolar large rRNA transcription by RNA polymerase I
L	0042797	biological_process	tRNA transcription by RNA polymerase III
L	0046872	molecular_function	metal ion binding
M	0000166	molecular_function	nucleotide binding
M	0000993	molecular_function	RNA polymerase II complex binding
M	0001174	biological_process	transcriptional start site selection at RNA polymerase II promoter
M	0003677	molecular_function	DNA binding
M	0005515	molecular_function	protein binding
M	0005634	cellular_component	nucleus
M	0005674	cellular_component	transcription factor TFIIF complex
M	0006351	biological_process	DNA-templated transcription
M	0006355	biological_process	regulation of DNA-templated transcription
M	0006366	biological_process	transcription by RNA polymerase II
M	0006367	biological_process	transcription initiation at RNA polymerase II promoter
M	0006368	biological_process	transcription elongation by RNA polymerase II
M	0051123	biological_process	RNA polymerase II preinitiation complex assembly
Q	0001096	molecular_function	TFIIF-class transcription factor complex binding
Q	0001174	biological_process	transcriptional start site selection at RNA polymerase II promoter
Q	0003677	molecular_function	DNA binding
Q	0005515	molecular_function	protein binding
Q	0005634	cellular_component	nucleus
Q	0005674	cellular_component	transcription factor TFIIF complex
Q	0006351	biological_process	DNA-templated transcription
Q	0006355	biological_process	regulation of DNA-templated transcription
Q	0006367	biological_process	transcription initiation at RNA polymerase II promoter
Q	0006368	biological_process	transcription elongation by RNA polymerase II
Q	0016251	molecular_function	RNA polymerase II general transcription initiation factor activity
Q	0032968	biological_process	positive regulation of transcription elongation by RNA polymerase II
Q	0051123	biological_process	RNA polymerase II preinitiation complex assembly
Q	0072542	molecular_function	protein phosphatase activator activity

Functional Information from PROSITE/UniProt

site_id	PS00115
Number of Residues	7
Details	RNA_POL_II_REPEAT Eukaryotic RNA polymerase II heptapeptide repeat. YSPTSPA

Chain	Residue	Details
a	TYR1549-ALA1555
a	TYR1612-SER1618
a	TYR1619-SER1625
a	TYR1626-SER1632
a	TYR1633-SER1639
a	TYR1640-SER1646
a	TYR1647-SER1653
a	TYR1654-ALA1660
a	TYR1661-SER1667
a	TYR1668-SER1674
a	TYR1675-SER1681
a	TYR1556-SER1562
a	TYR1682-SER1688
a	TYR1689-ASN1695
a	TYR1696-SER1702
a	TYR1563-SER1569
a	TYR1570-SER1576
a	TYR1577-SER1583
a	TYR1584-SER1590
a	TYR1591-SER1597
a	TYR1598-SER1604
a	TYR1605-SER1611

---

site_id	PS00446
Number of Residues	41
Details	RNA_POL_D_30KD RNA polymerases D / 30 to 40 Kd subunits signature. NSLRRvmiaeiptlAidsVevetNtTvlaDEfIAhRLGLIP

Chain	Residue	Details
c	ASN31-PRO71

---

site_id	PS00466
Number of Residues	36
Details	ZF_TFIIS_1 Zinc finger TFIIS-type signature. CpkChsrenvffqSQQRRkDTSmvlffvCls...CshiF

Chain	Residue	Details
i	CYS75-PHE110

---

site_id	PS01030
Number of Residues	27
Details	RNA_POL_M_15KD RNA polymerases M / 15 Kd subunits signature. FCRDCNNMLypredkennrllfeCrtC

Chain	Residue	Details
i	PHE6-CYS32

---

site_id	PS01110
Number of Residues	14
Details	RNA_POL_H_23KD RNA polymerases H / 23 Kd subunits signature. HELVPKHirLssDE

Chain	Residue	Details
e	HIS147-GLU160

---

site_id	PS01111
Number of Residues	15
Details	RNA_POL_K_14KD RNA polymerases K / 14 to 18 Kd subunits signature. TkYErARiLGtRAlQ

Chain	Residue	Details
f	THR86-GLN100

---

site_id	PS01112
Number of Residues	10
Details	RNA_POL_N_8KD RNA polymerases N / 8 Kd subunits signature. IVPVrCFSCG

Chain	Residue	Details
j	ILE2-GLY11

---

site_id	PS01154
Number of Residues	32
Details	RNA_POL_L_13KD RNA polymerases L / 13 to 16 Kd subunits signature. FekEdHTLgNlIraeLlndrkVlfaaYkveHP

Chain	Residue	Details
k	PHE35-PRO66

---

site_id	PS01166
Number of Residues	13
Details	RNA_POL_BETA RNA polymerases beta chain signature. GdKFASrHGQKGT

Chain	Residue	Details
b	GLY977-THR989

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	24
Details	Region: {"description":"Lid loop"}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	34
Details	Region: {"description":"Rudder loop"}

Chain

Residue

Details

---

site_id	SWS_FT_FI3
Number of Residues	24
Details	Region: {"description":"Bridging helix"}

Chain

Residue

Details

---

site_id	SWS_FT_FI4
Number of Residues	22
Details	Binding site: {"evidences":[{"source":"PubMed","id":"23151482","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"25652824","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"4BBR","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4V1M","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI5
Number of Residues	10
Details	Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"PubMed","id":"22106047","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI6
Number of Residues	84
Details	Zinc finger: {"description":"C4-type"}

Chain

Residue

Details

---

site_id	SWS_FT_FI7
Number of Residues	22
Details	Region: {"description":"Fork loop 1"}

Chain

Residue

Details

---

site_id	SWS_FT_FI8
Number of Residues	26
Details	Binding site: {}

Chain

Residue

Details

---

site_id	SWS_FT_FI9
Number of Residues	2
Details	Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"17330950","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"18407956","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI10
Number of Residues	42
Details	Region: {"description":"Leucine-zipper"}

Chain

Residue

Details

---

site_id	SWS_FT_FI11
Number of Residues	46
Details	Region: {"description":"Non-specific ssDNA binding","evidences":[{"evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI12
Number of Residues	2
Details	Modified residue: {"description":"N-acetylserine","evidences":[{"source":"PubMed","id":"22814378","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI13
Number of Residues	50
Details	Zinc finger: {"description":"C4-type","evidences":[{"evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI14
Number of Residues	80
Details	Zinc finger: {"description":"TFIIS-type","evidences":[{"source":"PROSITE-ProRule","id":"PRU00472","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI15
Number of Residues	8
Details	Binding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU10145","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"11313498","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"11805306","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"15537538","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"11313499","evidenceCode":"ECO:0000305"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI16
Number of Residues	8
Details	Binding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU00472","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"11313498","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"11805306","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"15537538","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"11313499","evidenceCode":"ECO:0000305"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI17
Number of Residues	3
Details	Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"18407956","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI18
Number of Residues	8
Details	Binding site: {"evidences":[{"source":"PubMed","id":"15537538","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1TWF","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

Catalytic Information from CSA

site_id	MCSA1
Number of Residues	1
Details	M-CSA 788

Chain

Residue

Details

---

site_id	MCSA2
Number of Residues	1
Details	M-CSA 788

Chain

Residue

Details

---