7LDA
Crystal structure of a ribose-5-phosphate isomerase from Stenotrophomonas maltophilia K279a
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0004751 | molecular_function | ribose-5-phosphate isomerase activity |
| A | 0005829 | cellular_component | cytosol |
| A | 0006014 | biological_process | D-ribose metabolic process |
| A | 0006098 | biological_process | pentose-phosphate shunt |
| A | 0009052 | biological_process | pentose-phosphate shunt, non-oxidative branch |
| A | 0016853 | molecular_function | isomerase activity |
| A | 0044281 | biological_process | small molecule metabolic process |
| B | 0004751 | molecular_function | ribose-5-phosphate isomerase activity |
| B | 0005829 | cellular_component | cytosol |
| B | 0006014 | biological_process | D-ribose metabolic process |
| B | 0006098 | biological_process | pentose-phosphate shunt |
| B | 0009052 | biological_process | pentose-phosphate shunt, non-oxidative branch |
| B | 0016853 | molecular_function | isomerase activity |
| B | 0044281 | biological_process | small molecule metabolic process |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 7 |
| Details | binding site for residue EDO A 301 |
| Chain | Residue |
| A | THR26 |
| A | ASP79 |
| A | GLY80 |
| A | ASP82 |
| A | LYS92 |
| A | GLY93 |
| A | GLU101 |
| site_id | AC2 |
| Number of Residues | 9 |
| Details | binding site for residue SO4 A 302 |
| Chain | Residue |
| A | LYS119 |
| A | HOH413 |
| A | HOH440 |
| A | HOH453 |
| A | HOH529 |
| A | HOH539 |
| A | HOH548 |
| A | SER28 |
| A | THR29 |
| site_id | AC3 |
| Number of Residues | 6 |
| Details | binding site for residue SO4 A 303 |
| Chain | Residue |
| A | GLY27 |
| A | SER28 |
| A | ARG57 |
| A | HOH406 |
| A | HOH414 |
| A | HOH581 |
| site_id | AC4 |
| Number of Residues | 7 |
| Details | binding site for residue EDO A 304 |
| Chain | Residue |
| A | ASP85 |
| A | ALA86 |
| A | ASN87 |
| A | PRO122 |
| A | HOH510 |
| A | HOH568 |
| A | HOH607 |
| site_id | AC5 |
| Number of Residues | 4 |
| Details | binding site for residue EDO A 305 |
| Chain | Residue |
| A | ARG143 |
| A | HOH422 |
| A | HOH452 |
| B | ASN73 |
| site_id | AC6 |
| Number of Residues | 5 |
| Details | binding site for residue SO4 A 306 |
| Chain | Residue |
| A | ASN69 |
| A | HOH436 |
| A | HOH479 |
| A | HOH560 |
| B | ARG138 |
| site_id | AC7 |
| Number of Residues | 4 |
| Details | binding site for residue EDO B 301 |
| Chain | Residue |
| A | ASN73 |
| A | HOH567 |
| B | ARG143 |
| B | HOH409 |
| site_id | AC8 |
| Number of Residues | 8 |
| Details | binding site for residue EDO B 302 |
| Chain | Residue |
| B | THR26 |
| B | ASP79 |
| B | GLY80 |
| B | ASP82 |
| B | LYS92 |
| B | GLY93 |
| B | GLU101 |
| B | SO4303 |
| site_id | AC9 |
| Number of Residues | 10 |
| Details | binding site for residue SO4 B 303 |
| Chain | Residue |
| B | SER28 |
| B | THR29 |
| B | LYS119 |
| B | EDO302 |
| B | HOH433 |
| B | HOH445 |
| B | HOH474 |
| B | HOH512 |
| B | HOH529 |
| B | HOH554 |
| site_id | AD1 |
| Number of Residues | 5 |
| Details | binding site for residue SO4 B 304 |
| Chain | Residue |
| B | SER2 |
| B | LYS5 |
| B | SER28 |
| B | TYR32 |
| B | HOH424 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 2 |
| Details | ACT_SITE: Proton acceptor => ECO:0000255|HAMAP-Rule:MF_00170 |
| Chain | Residue | Details |
| A | GLU101 | |
| B | GLU101 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 8 |
| Details | BINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00170 |
| Chain | Residue | Details |
| A | THR26 | |
| A | ASP79 | |
| A | LYS92 | |
| A | LYS119 | |
| B | THR26 | |
| B | ASP79 | |
| B | LYS92 | |
| B | LYS119 |
