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7KYY

Crystal structure of Plasmodium falciparum dihydroorotate dehydrogenase bound with Inhibitor DSM697 (3-methyl-N-(1-(5-methylisoxazol-3-yl)ethyl)-4-(6-(trifluoromethyl)-1H-indol-3-yl)-1H-pyrrole-2-carboxamide)

Functional Information from GO Data
ChainGOidnamespacecontents
A0004152molecular_functiondihydroorotate dehydrogenase activity
A0005737cellular_componentcytoplasm
A0006207biological_process'de novo' pyrimidine nucleobase biosynthetic process
A0016020cellular_componentmembrane
A0016627molecular_functionoxidoreductase activity, acting on the CH-CH group of donors
B0004152molecular_functiondihydroorotate dehydrogenase activity
B0005737cellular_componentcytoplasm
B0006207biological_process'de novo' pyrimidine nucleobase biosynthetic process
B0016020cellular_componentmembrane
B0016627molecular_functionoxidoreductase activity, acting on the CH-CH group of donors
C0004152molecular_functiondihydroorotate dehydrogenase activity
C0005737cellular_componentcytoplasm
C0006207biological_process'de novo' pyrimidine nucleobase biosynthetic process
C0016020cellular_componentmembrane
C0016627molecular_functionoxidoreductase activity, acting on the CH-CH group of donors
D0004152molecular_functiondihydroorotate dehydrogenase activity
D0005737cellular_componentcytoplasm
D0006207biological_process'de novo' pyrimidine nucleobase biosynthetic process
D0016020cellular_componentmembrane
D0016627molecular_functionoxidoreductase activity, acting on the CH-CH group of donors
Functional Information from PDB Data
site_idAC1
Number of Residues17
Detailsbinding site for residue XCD A 1001
ChainResidue
ATYR168
AILE263
AARG265
ATYR528
ALEU531
AVAL532
AGLY535
AMET536
AHOH1235
APHE171
ALEU172
AGLY181
AGLU182
ACYS184
AHIS185
ALEU191
AGLY226

site_idAC2
Number of Residues21
Detailsbinding site for residue FMN A 1002
ChainResidue
AALA224
AALA225
AGLY226
ATHR249
AASN274
AASN342
ALYS429
ASER457
ASER477
AGLY478
ALEU481
ASER505
AGLY506
AGLY507
ATYR528
ASER529
AORO1003
AHOH1124
AHOH1151
AHOH1158
AHOH1166

site_idAC3
Number of Residues10
Detailsbinding site for residue ORO A 1003
ChainResidue
AASN274
ACYS276
AGLY277
APHE278
AASN342
ASER345
AASN347
AASN458
ATHR459
AFMN1002

site_idAC4
Number of Residues14
Detailsbinding site for residue XCD B 1001
ChainResidue
BTYR168
BPHE171
BLEU172
BGLY181
BGLU182
BCYS184
BHIS185
BLEU187
BLEU191
BILE263
BARG265
BTYR528
BLEU531
BVAL532

site_idAC5
Number of Residues22
Detailsbinding site for residue FMN B 1002
ChainResidue
BALA224
BALA225
BGLY226
BLYS229
BTHR249
BASN274
BASN342
BLYS429
BSER457
BSER477
BGLY478
BLEU481
BSER505
BGLY506
BGLY507
BTYR528
BSER529
BORO1003
BHOH1114
BHOH1115
BHOH1128
BHOH1149

site_idAC6
Number of Residues11
Detailsbinding site for residue ORO B 1003
ChainResidue
BLYS229
BASN274
BCYS276
BGLY277
BPHE278
BASN342
BSER345
BASN347
BASN458
BTHR459
BFMN1002

site_idAC7
Number of Residues17
Detailsbinding site for residue XCD C 1001
ChainResidue
CGLY181
CGLU182
CCYS184
CHIS185
CLEU187
CPHE188
CLEU191
CGLY226
CILE263
CARG265
CTYR528
CLEU531
CVAL532
CTYR168
CPHE171
CLEU172
CCYS175

site_idAC8
Number of Residues23
Detailsbinding site for residue FMN C 1002
ChainResidue
CALA224
CALA225
CGLY226
CLYS229
CTHR249
CASN274
CASN342
CLYS429
CSER457
CASN458
CSER477
CGLY478
CLEU481
CSER505
CGLY506
CGLY507
CTYR528
CSER529
CORO1003
CHOH1107
CHOH1118
CHOH1121
CHOH1136

site_idAC9
Number of Residues11
Detailsbinding site for residue ORO C 1003
ChainResidue
CLYS229
CASN274
CCYS276
CGLY277
CPHE278
CASN342
CSER345
CASN347
CASN458
CTHR459
CFMN1002

site_idAD1
Number of Residues17
Detailsbinding site for residue XCD D 1001
ChainResidue
DTYR168
DPHE171
DLEU172
DGLY181
DGLU182
DCYS184
DHIS185
DLEU187
DPHE188
DLEU191
DGLY226
DILE263
DARG265
DTYR528
DLEU531
DVAL532
DHOH1168

site_idAD2
Number of Residues20
Detailsbinding site for residue FMN D 1002
ChainResidue
DALA224
DALA225
DGLY226
DTHR249
DASN274
DASN342
DLYS429
DSER457
DSER477
DGLY478
DSER505
DGLY506
DGLY507
DTYR528
DSER529
DORO1003
DHOH1107
DHOH1111
DHOH1123
DHOH1139

site_idAD3
Number of Residues10
Detailsbinding site for residue ORO D 1003
ChainResidue
DASN274
DCYS276
DGLY277
DPHE278
DASN342
DSER345
DASN347
DASN458
DTHR459
DFMN1002

Functional Information from PROSITE/UniProt
site_idPS00911
Number of Residues20
DetailsDHODEHASE_1 Dihydroorotate dehydrogenase signature 1. SfieiGTITprgQtGNakPR
ChainResidueDetails
ASER243-ARG262

site_idPS00912
Number of Residues21
DetailsDHODEHASE_2 Dihydroorotate dehydrogenase signature 2. IIAsGGIfSgldAleKIeAGA
ChainResidueDetails
AILE502-ALA522

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsActive site: {"description":"Nucleophile","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues40
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"16510978","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"20702404","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues32
DetailsBinding site: {}
ChainResidueDetails

246704

PDB entries from 2025-12-24

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