7JY9

Structure of a 9 base pair RecA-D loop complex

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0000166	molecular_function	nucleotide binding
A	0000725	biological_process	recombinational repair
A	0003677	molecular_function	DNA binding
A	0003684	molecular_function	damaged DNA binding
A	0003697	molecular_function	single-stranded DNA binding
A	0005515	molecular_function	protein binding
A	0005524	molecular_function	ATP binding
A	0005737	cellular_component	cytoplasm
A	0006259	biological_process	DNA metabolic process
A	0006281	biological_process	DNA repair
A	0006310	biological_process	DNA recombination
A	0006974	biological_process	DNA damage response
A	0008094	molecular_function	ATP-dependent activity, acting on DNA
A	0009432	biological_process	SOS response
A	0010212	biological_process	response to ionizing radiation
A	0019985	biological_process	translesion synthesis
A	0035825	biological_process	homologous recombination
A	0048870	biological_process	cell motility
A	0140297	molecular_function	DNA-binding transcription factor binding
A	0140664	molecular_function	ATP-dependent DNA damage sensor activity
B	0000166	molecular_function	nucleotide binding
B	0000725	biological_process	recombinational repair
B	0003677	molecular_function	DNA binding
B	0003684	molecular_function	damaged DNA binding
B	0003697	molecular_function	single-stranded DNA binding
B	0005515	molecular_function	protein binding
B	0005524	molecular_function	ATP binding
B	0005737	cellular_component	cytoplasm
B	0006259	biological_process	DNA metabolic process
B	0006281	biological_process	DNA repair
B	0006310	biological_process	DNA recombination
B	0006974	biological_process	DNA damage response
B	0008094	molecular_function	ATP-dependent activity, acting on DNA
B	0009432	biological_process	SOS response
B	0010212	biological_process	response to ionizing radiation
B	0019985	biological_process	translesion synthesis
B	0035825	biological_process	homologous recombination
B	0048870	biological_process	cell motility
B	0140297	molecular_function	DNA-binding transcription factor binding
B	0140664	molecular_function	ATP-dependent DNA damage sensor activity
C	0000166	molecular_function	nucleotide binding
C	0000725	biological_process	recombinational repair
C	0003677	molecular_function	DNA binding
C	0003684	molecular_function	damaged DNA binding
C	0003697	molecular_function	single-stranded DNA binding
C	0005515	molecular_function	protein binding
C	0005524	molecular_function	ATP binding
C	0005737	cellular_component	cytoplasm
C	0006259	biological_process	DNA metabolic process
C	0006281	biological_process	DNA repair
C	0006310	biological_process	DNA recombination
C	0006974	biological_process	DNA damage response
C	0008094	molecular_function	ATP-dependent activity, acting on DNA
C	0009432	biological_process	SOS response
C	0010212	biological_process	response to ionizing radiation
C	0019985	biological_process	translesion synthesis
C	0035825	biological_process	homologous recombination
C	0048870	biological_process	cell motility
C	0140297	molecular_function	DNA-binding transcription factor binding
C	0140664	molecular_function	ATP-dependent DNA damage sensor activity
D	0000166	molecular_function	nucleotide binding
D	0000725	biological_process	recombinational repair
D	0003677	molecular_function	DNA binding
D	0003684	molecular_function	damaged DNA binding
D	0003697	molecular_function	single-stranded DNA binding
D	0005515	molecular_function	protein binding
D	0005524	molecular_function	ATP binding
D	0005737	cellular_component	cytoplasm
D	0006259	biological_process	DNA metabolic process
D	0006281	biological_process	DNA repair
D	0006310	biological_process	DNA recombination
D	0006974	biological_process	DNA damage response
D	0008094	molecular_function	ATP-dependent activity, acting on DNA
D	0009432	biological_process	SOS response
D	0010212	biological_process	response to ionizing radiation
D	0019985	biological_process	translesion synthesis
D	0035825	biological_process	homologous recombination
D	0048870	biological_process	cell motility
D	0140297	molecular_function	DNA-binding transcription factor binding
D	0140664	molecular_function	ATP-dependent DNA damage sensor activity
E	0000166	molecular_function	nucleotide binding
E	0000725	biological_process	recombinational repair
E	0003677	molecular_function	DNA binding
E	0003684	molecular_function	damaged DNA binding
E	0003697	molecular_function	single-stranded DNA binding
E	0005515	molecular_function	protein binding
E	0005524	molecular_function	ATP binding
E	0005737	cellular_component	cytoplasm
E	0006259	biological_process	DNA metabolic process
E	0006281	biological_process	DNA repair
E	0006310	biological_process	DNA recombination
E	0006974	biological_process	DNA damage response
E	0008094	molecular_function	ATP-dependent activity, acting on DNA
E	0009432	biological_process	SOS response
E	0010212	biological_process	response to ionizing radiation
E	0019985	biological_process	translesion synthesis
E	0035825	biological_process	homologous recombination
E	0048870	biological_process	cell motility
E	0140297	molecular_function	DNA-binding transcription factor binding
E	0140664	molecular_function	ATP-dependent DNA damage sensor activity
F	0000166	molecular_function	nucleotide binding
F	0000725	biological_process	recombinational repair
F	0003677	molecular_function	DNA binding
F	0003684	molecular_function	damaged DNA binding
F	0003697	molecular_function	single-stranded DNA binding
F	0005515	molecular_function	protein binding
F	0005524	molecular_function	ATP binding
F	0005737	cellular_component	cytoplasm
F	0006259	biological_process	DNA metabolic process
F	0006281	biological_process	DNA repair
F	0006310	biological_process	DNA recombination
F	0006974	biological_process	DNA damage response
F	0008094	molecular_function	ATP-dependent activity, acting on DNA
F	0009432	biological_process	SOS response
F	0010212	biological_process	response to ionizing radiation
F	0019985	biological_process	translesion synthesis
F	0035825	biological_process	homologous recombination
F	0048870	biological_process	cell motility
F	0140297	molecular_function	DNA-binding transcription factor binding
F	0140664	molecular_function	ATP-dependent DNA damage sensor activity
G	0000166	molecular_function	nucleotide binding
G	0000725	biological_process	recombinational repair
G	0003677	molecular_function	DNA binding
G	0003684	molecular_function	damaged DNA binding
G	0003697	molecular_function	single-stranded DNA binding
G	0005515	molecular_function	protein binding
G	0005524	molecular_function	ATP binding
G	0005737	cellular_component	cytoplasm
G	0006259	biological_process	DNA metabolic process
G	0006281	biological_process	DNA repair
G	0006310	biological_process	DNA recombination
G	0006974	biological_process	DNA damage response
G	0008094	molecular_function	ATP-dependent activity, acting on DNA
G	0009432	biological_process	SOS response
G	0010212	biological_process	response to ionizing radiation
G	0019985	biological_process	translesion synthesis
G	0035825	biological_process	homologous recombination
G	0048870	biological_process	cell motility
G	0140297	molecular_function	DNA-binding transcription factor binding
G	0140664	molecular_function	ATP-dependent DNA damage sensor activity
H	0000166	molecular_function	nucleotide binding
H	0000725	biological_process	recombinational repair
H	0003677	molecular_function	DNA binding
H	0003684	molecular_function	damaged DNA binding
H	0003697	molecular_function	single-stranded DNA binding
H	0005515	molecular_function	protein binding
H	0005524	molecular_function	ATP binding
H	0005737	cellular_component	cytoplasm
H	0006259	biological_process	DNA metabolic process
H	0006281	biological_process	DNA repair
H	0006310	biological_process	DNA recombination
H	0006974	biological_process	DNA damage response
H	0008094	molecular_function	ATP-dependent activity, acting on DNA
H	0009432	biological_process	SOS response
H	0010212	biological_process	response to ionizing radiation
H	0019985	biological_process	translesion synthesis
H	0035825	biological_process	homologous recombination
H	0048870	biological_process	cell motility
H	0140297	molecular_function	DNA-binding transcription factor binding
H	0140664	molecular_function	ATP-dependent DNA damage sensor activity
I	0000166	molecular_function	nucleotide binding
I	0000725	biological_process	recombinational repair
I	0003677	molecular_function	DNA binding
I	0003684	molecular_function	damaged DNA binding
I	0003697	molecular_function	single-stranded DNA binding
I	0005515	molecular_function	protein binding
I	0005524	molecular_function	ATP binding
I	0005737	cellular_component	cytoplasm
I	0006259	biological_process	DNA metabolic process
I	0006281	biological_process	DNA repair
I	0006310	biological_process	DNA recombination
I	0006974	biological_process	DNA damage response
I	0008094	molecular_function	ATP-dependent activity, acting on DNA
I	0009432	biological_process	SOS response
I	0010212	biological_process	response to ionizing radiation
I	0019985	biological_process	translesion synthesis
I	0035825	biological_process	homologous recombination
I	0048870	biological_process	cell motility
I	0140297	molecular_function	DNA-binding transcription factor binding
I	0140664	molecular_function	ATP-dependent DNA damage sensor activity

Functional Information from PROSITE/UniProt

site_id	PS00321
Number of Residues	9
Details	RECA_1 recA signature. ALKFYASVR

Chain	Residue	Details
A	ALA214-ARG222

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI3
Number of Residues	63
Details	Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_00268","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"1731253","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---