7JPJ
Crystal Structure of the essential dimeric LYSA from Phaeodactylum tricornutum
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0003824 | molecular_function | catalytic activity |
| A | 0008836 | molecular_function | diaminopimelate decarboxylase activity |
| A | 0009089 | biological_process | lysine biosynthetic process via diaminopimelate |
| A | 0016829 | molecular_function | lyase activity |
| A | 0016830 | molecular_function | carbon-carbon lyase activity |
| A | 0016831 | molecular_function | carboxy-lyase activity |
| B | 0003824 | molecular_function | catalytic activity |
| B | 0008836 | molecular_function | diaminopimelate decarboxylase activity |
| B | 0009089 | biological_process | lysine biosynthetic process via diaminopimelate |
| B | 0016829 | molecular_function | lyase activity |
| B | 0016830 | molecular_function | carbon-carbon lyase activity |
| B | 0016831 | molecular_function | carboxy-lyase activity |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 4 |
| Details | binding site for residue DLY A 501 |
| Chain | Residue |
| A | LYS275 |
| A | VAL276 |
| A | ARG278 |
| A | ARG356 |
| site_id | AC2 |
| Number of Residues | 5 |
| Details | binding site for residue SO4 A 502 |
| Chain | Residue |
| A | GLY273 |
| A | GLY316 |
| A | THR317 |
| A | TYR430 |
| A | HOH615 |
| site_id | AC3 |
| Number of Residues | 3 |
| Details | binding site for residue SO4 A 503 |
| Chain | Residue |
| A | THR464 |
| A | LEU465 |
| A | HOH609 |
| site_id | AC4 |
| Number of Residues | 2 |
| Details | binding site for residue SO4 A 504 |
| Chain | Residue |
| A | ALA75 |
| A | TYR318 |
| site_id | AC5 |
| Number of Residues | 5 |
| Details | binding site for residue SO4 B 501 |
| Chain | Residue |
| B | GLY273 |
| B | GLY316 |
| B | THR317 |
| B | TYR430 |
| B | HOH611 |
| site_id | AC6 |
| Number of Residues | 2 |
| Details | binding site for residue SO4 B 502 |
| Chain | Residue |
| B | THR464 |
| B | LEU465 |
| site_id | AC7 |
| Number of Residues | 2 |
| Details | binding site for residue SO4 B 503 |
| Chain | Residue |
| B | GLU383 |
| B | SER384 |
| site_id | AC8 |
| Number of Residues | 4 |
| Details | binding site for residue SO4 B 504 |
| Chain | Residue |
| A | ASN110 |
| B | GLN288 |
| B | LYS289 |
| B | LYS292 |
