7FJ1

Cryo-EM structure of pseudorabies virus C-capsid

This is a non-PDB format compatible entry.

Functional Information from GO Data

Chain	GOid	namespace	contents
0	0005198	molecular_function	structural molecule activity
0	0019028	cellular_component	viral capsid
0	0039622	cellular_component	T=16 icosahedral viral capsid
1	0005198	molecular_function	structural molecule activity
1	0019028	cellular_component	viral capsid
2	0005198	molecular_function	structural molecule activity
2	0019028	cellular_component	viral capsid
3	0005198	molecular_function	structural molecule activity
3	0019028	cellular_component	viral capsid
a	0005198	molecular_function	structural molecule activity
a	0019028	cellular_component	viral capsid
a	0039622	cellular_component	T=16 icosahedral viral capsid
A	0005198	molecular_function	structural molecule activity
A	0019028	cellular_component	viral capsid
A	0039622	cellular_component	T=16 icosahedral viral capsid
B	0019028	cellular_component	viral capsid
B	0044423	cellular_component	virion component
B	0051276	biological_process	chromosome organization
c	0019028	cellular_component	viral capsid
c	0019072	biological_process	viral genome packaging
c	0043657	cellular_component	host cell
c	0046718	biological_process	symbiont entry into host cell
c	0075732	biological_process	viral penetration into host nucleus
e	0005198	molecular_function	structural molecule activity
e	0019028	cellular_component	viral capsid
e	0039622	cellular_component	T=16 icosahedral viral capsid
E	0016032	biological_process	viral process
E	0019028	cellular_component	viral capsid
E	0042025	cellular_component	host cell nucleus
f	0005198	molecular_function	structural molecule activity
f	0019028	cellular_component	viral capsid
f	0039622	cellular_component	T=16 icosahedral viral capsid
F	0016032	biological_process	viral process
F	0019028	cellular_component	viral capsid
F	0042025	cellular_component	host cell nucleus
g	0005198	molecular_function	structural molecule activity
g	0019028	cellular_component	viral capsid
g	0039622	cellular_component	T=16 icosahedral viral capsid
G	0016032	biological_process	viral process
G	0019028	cellular_component	viral capsid
G	0042025	cellular_component	host cell nucleus
h	0003677	molecular_function	DNA binding
h	0019069	biological_process	viral capsid assembly
h	0044423	cellular_component	virion component
H	0016032	biological_process	viral process
H	0019028	cellular_component	viral capsid
H	0042025	cellular_component	host cell nucleus
i	0003677	molecular_function	DNA binding
i	0019069	biological_process	viral capsid assembly
i	0044423	cellular_component	virion component
I	0016032	biological_process	viral process
I	0019028	cellular_component	viral capsid
I	0042025	cellular_component	host cell nucleus
j	0005198	molecular_function	structural molecule activity
j	0019028	cellular_component	viral capsid
J	0016032	biological_process	viral process
J	0019028	cellular_component	viral capsid
J	0042025	cellular_component	host cell nucleus
k	0005198	molecular_function	structural molecule activity
k	0019028	cellular_component	viral capsid
K	0016032	biological_process	viral process
K	0019028	cellular_component	viral capsid
K	0042025	cellular_component	host cell nucleus
l	0005198	molecular_function	structural molecule activity
l	0019028	cellular_component	viral capsid
l	0039622	cellular_component	T=16 icosahedral viral capsid
L	0016032	biological_process	viral process
L	0019028	cellular_component	viral capsid
L	0042025	cellular_component	host cell nucleus
m	0005198	molecular_function	structural molecule activity
m	0019028	cellular_component	viral capsid
m	0039622	cellular_component	T=16 icosahedral viral capsid
M	0016032	biological_process	viral process
M	0019028	cellular_component	viral capsid
M	0042025	cellular_component	host cell nucleus
n	0005198	molecular_function	structural molecule activity
n	0019028	cellular_component	viral capsid
n	0039622	cellular_component	T=16 icosahedral viral capsid
N	0016032	biological_process	viral process
N	0019028	cellular_component	viral capsid
N	0042025	cellular_component	host cell nucleus
o	0005198	molecular_function	structural molecule activity
o	0019028	cellular_component	viral capsid
O	0016032	biological_process	viral process
O	0019028	cellular_component	viral capsid
O	0042025	cellular_component	host cell nucleus
p	0005198	molecular_function	structural molecule activity
p	0019028	cellular_component	viral capsid
p	0039622	cellular_component	T=16 icosahedral viral capsid
P	0016032	biological_process	viral process
P	0019028	cellular_component	viral capsid
P	0042025	cellular_component	host cell nucleus
q	0005198	molecular_function	structural molecule activity
q	0019028	cellular_component	viral capsid
q	0039622	cellular_component	T=16 icosahedral viral capsid
Q	0016032	biological_process	viral process
Q	0019028	cellular_component	viral capsid
Q	0042025	cellular_component	host cell nucleus
r	0003677	molecular_function	DNA binding
r	0019069	biological_process	viral capsid assembly
r	0044423	cellular_component	virion component
R	0016032	biological_process	viral process
R	0019028	cellular_component	viral capsid
R	0042025	cellular_component	host cell nucleus
s	0005198	molecular_function	structural molecule activity
s	0019028	cellular_component	viral capsid
S	0005198	molecular_function	structural molecule activity
S	0019028	cellular_component	viral capsid
S	0039622	cellular_component	T=16 icosahedral viral capsid
t	0003677	molecular_function	DNA binding
t	0019069	biological_process	viral capsid assembly
t	0044423	cellular_component	virion component
T	0003677	molecular_function	DNA binding
T	0019069	biological_process	viral capsid assembly
T	0044423	cellular_component	virion component
u	0005198	molecular_function	structural molecule activity
u	0019028	cellular_component	viral capsid
u	0039622	cellular_component	T=16 icosahedral viral capsid
U	0005198	molecular_function	structural molecule activity
U	0019028	cellular_component	viral capsid
U	0039622	cellular_component	T=16 icosahedral viral capsid
v	0005198	molecular_function	structural molecule activity
v	0019028	cellular_component	viral capsid
V	0016032	biological_process	viral process
V	0019028	cellular_component	viral capsid
V	0042025	cellular_component	host cell nucleus
w	0005198	molecular_function	structural molecule activity
w	0019028	cellular_component	viral capsid
w	0039622	cellular_component	T=16 icosahedral viral capsid
x	0005198	molecular_function	structural molecule activity
x	0019028	cellular_component	viral capsid
X	0019028	cellular_component	viral capsid
X	0019072	biological_process	viral genome packaging
X	0043657	cellular_component	host cell
X	0046718	biological_process	symbiont entry into host cell
X	0075732	biological_process	viral penetration into host nucleus
y	0005198	molecular_function	structural molecule activity
y	0019028	cellular_component	viral capsid
y	0039622	cellular_component	T=16 icosahedral viral capsid
z	0005198	molecular_function	structural molecule activity
z	0019028	cellular_component	viral capsid

Functional Information from PROSITE/UniProt

site_id	PS00141
Number of Residues	12
Details	ASP_PROTEASE Eukaryotic and viral aspartyl proteases active site. LIADTGAAASPT

Chain	Residue	Details
0	LEU1250-THR1261

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