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7ELD

Cryo-EM structure of Arabidopsis DCL1 in complex with pri-miRNA 166f

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0000911biological_processcytokinesis by cell plate formation
A0003677molecular_functionDNA binding
A0003723molecular_functionRNA binding
A0003725molecular_functiondouble-stranded RNA binding
A0004386molecular_functionhelicase activity
A0004518molecular_functionnuclease activity
A0004519molecular_functionendonuclease activity
A0004525molecular_functionribonuclease III activity
A0005515molecular_functionprotein binding
A0005524molecular_functionATP binding
A0005634cellular_componentnucleus
A0005737cellular_componentcytoplasm
A0006364biological_processrRNA processing
A0006396biological_processRNA processing
A0009616biological_processRNAi-mediated antiviral immune response
A0009880biological_processembryonic pattern specification
A0009908biological_processflower development
A0010228biological_processvegetative to reproductive phase transition of meristem
A0010267biological_processta-siRNA processing
A0010445cellular_componentnuclear dicing body
A0010599biological_processlsiRNA processing
A0016787molecular_functionhydrolase activity
A0016891molecular_functionRNA endonuclease activity producing 5'-phosphomonoesters, hydrolytic mechanism
A0030422biological_processsiRNA processing
A0031047biological_processregulatory ncRNA-mediated gene silencing
A0031053biological_processprimary miRNA processing
A0035279biological_processmiRNA-mediated gene silencing by mRNA destabilization
A0046872molecular_functionmetal ion binding
A0048317biological_processseed morphogenesis
A2000034biological_processregulation of seed maturation
Functional Information from PROSITE/UniProt
site_idPS00517
Number of Residues9
DetailsRNASE_3_1 Ribonuclease III family signature. QRLEFVGDA
ChainResidueDetails
AGLN1594-ALA1602

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues177
DetailsDomain: {"description":"Helicase ATP-binding"}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues161
DetailsDomain: {"description":"Helicase C-terminal"}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues3
DetailsMotif: {"description":"DECH box"}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues7
DetailsBinding site: {"evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues3
DetailsBinding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues1
DetailsSite: {"description":"Important for activity","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

247947

PDB entries from 2026-01-21

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