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7ELD

Cryo-EM structure of Arabidopsis DCL1 in complex with pri-miRNA 166f

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0003723molecular_functionRNA binding
A0003725molecular_functiondouble-stranded RNA binding
A0004386molecular_functionhelicase activity
A0004519molecular_functionendonuclease activity
A0004525molecular_functionribonuclease III activity
A0005515molecular_functionprotein binding
A0005524molecular_functionATP binding
A0005634cellular_componentnucleus
A0005737cellular_componentcytoplasm
A0006364biological_processrRNA processing
A0006396biological_processRNA processing
A0010267biological_processta-siRNA processing
A0016787molecular_functionhydrolase activity
A0016891molecular_functionRNA endonuclease activity, producing 5'-phosphomonoesters
A0030422biological_processsiRNA processing
A0031047biological_processregulatory ncRNA-mediated gene silencing
A0046872molecular_functionmetal ion binding
Functional Information from PROSITE/UniProt
site_idPS00517
Number of Residues9
DetailsRNASE_3_1 Ribonuclease III family signature. QRLEFVGDA
ChainResidueDetails
AGLN1594-ALA1602

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsBINDING: BINDING => ECO:0000255
ChainResidueDetails
ALEU269

site_idSWS_FT_FI2
Number of Residues3
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
AGLU1597
AASP1693
AGLU1696

site_idSWS_FT_FI3
Number of Residues1
DetailsSITE: Important for activity => ECO:0000250
ChainResidueDetails
ALYS1689

220113

PDB entries from 2024-05-22

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