7EDA

Structure of monomeric photosystem II

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0005506	molecular_function	iron ion binding
A	0009055	molecular_function	electron transfer activity
A	0009523	cellular_component	photosystem II
A	0009579	cellular_component	thylakoid
A	0009635	biological_process	response to herbicide
A	0009772	biological_process	photosynthetic electron transport in photosystem II
A	0010242	molecular_function	oxygen evolving activity
A	0015979	biological_process	photosynthesis
A	0016020	cellular_component	membrane
A	0016168	molecular_function	chlorophyll binding
A	0016491	molecular_function	oxidoreductase activity
A	0016682	molecular_function	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
A	0019684	biological_process	photosynthesis, light reaction
A	0031676	cellular_component	plasma membrane-derived thylakoid membrane
A	0042651	cellular_component	thylakoid membrane
A	0045156	molecular_function	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
A	0046872	molecular_function	metal ion binding
B	0009521	cellular_component	photosystem
B	0009523	cellular_component	photosystem II
B	0009579	cellular_component	thylakoid
B	0009767	biological_process	photosynthetic electron transport chain
B	0009772	biological_process	photosynthetic electron transport in photosystem II
B	0015979	biological_process	photosynthesis
B	0016020	cellular_component	membrane
B	0016168	molecular_function	chlorophyll binding
B	0019684	biological_process	photosynthesis, light reaction
B	0031676	cellular_component	plasma membrane-derived thylakoid membrane
B	0045156	molecular_function	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
B	0046872	molecular_function	metal ion binding
C	0005737	cellular_component	cytoplasm
C	0009521	cellular_component	photosystem
C	0009523	cellular_component	photosystem II
C	0009579	cellular_component	thylakoid
C	0009767	biological_process	photosynthetic electron transport chain
C	0009772	biological_process	photosynthetic electron transport in photosystem II
C	0015979	biological_process	photosynthesis
C	0016020	cellular_component	membrane
C	0016168	molecular_function	chlorophyll binding
C	0019684	biological_process	photosynthesis, light reaction
C	0031676	cellular_component	plasma membrane-derived thylakoid membrane
C	0043229	cellular_component	intracellular organelle
C	0045156	molecular_function	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
C	0046872	molecular_function	metal ion binding
D	0009523	cellular_component	photosystem II
D	0009579	cellular_component	thylakoid
D	0009772	biological_process	photosynthetic electron transport in photosystem II
D	0010242	molecular_function	oxygen evolving activity
D	0015979	biological_process	photosynthesis
D	0016020	cellular_component	membrane
D	0016168	molecular_function	chlorophyll binding
D	0016491	molecular_function	oxidoreductase activity
D	0019684	biological_process	photosynthesis, light reaction
D	0031676	cellular_component	plasma membrane-derived thylakoid membrane
D	0045156	molecular_function	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
D	0046872	molecular_function	metal ion binding
E	0005506	molecular_function	iron ion binding
E	0005737	cellular_component	cytoplasm
E	0009055	molecular_function	electron transfer activity
E	0009523	cellular_component	photosystem II
E	0009539	cellular_component	photosystem II reaction center
E	0009579	cellular_component	thylakoid
E	0009767	biological_process	photosynthetic electron transport chain
E	0015979	biological_process	photosynthesis
E	0016020	cellular_component	membrane
E	0019684	biological_process	photosynthesis, light reaction
E	0020037	molecular_function	heme binding
E	0031676	cellular_component	plasma membrane-derived thylakoid membrane
E	0042651	cellular_component	thylakoid membrane
E	0043229	cellular_component	intracellular organelle
E	0046872	molecular_function	metal ion binding
F	0005506	molecular_function	iron ion binding
F	0005737	cellular_component	cytoplasm
F	0009055	molecular_function	electron transfer activity
F	0009523	cellular_component	photosystem II
F	0009539	cellular_component	photosystem II reaction center
F	0009579	cellular_component	thylakoid
F	0009767	biological_process	photosynthetic electron transport chain
F	0015979	biological_process	photosynthesis
F	0016020	cellular_component	membrane
F	0019684	biological_process	photosynthesis, light reaction
F	0020037	molecular_function	heme binding
F	0031676	cellular_component	plasma membrane-derived thylakoid membrane
F	0042651	cellular_component	thylakoid membrane
F	0043229	cellular_component	intracellular organelle
F	0046872	molecular_function	metal ion binding
H	0009523	cellular_component	photosystem II
H	0009579	cellular_component	thylakoid
H	0015979	biological_process	photosynthesis
H	0016020	cellular_component	membrane
H	0031676	cellular_component	plasma membrane-derived thylakoid membrane
H	0042301	molecular_function	phosphate ion binding
H	0043229	cellular_component	intracellular organelle
H	0050821	biological_process	protein stabilization
I	0005737	cellular_component	cytoplasm
I	0009523	cellular_component	photosystem II
I	0009539	cellular_component	photosystem II reaction center
I	0009579	cellular_component	thylakoid
I	0015979	biological_process	photosynthesis
I	0016020	cellular_component	membrane
I	0031676	cellular_component	plasma membrane-derived thylakoid membrane
I	0042651	cellular_component	thylakoid membrane
I	0043229	cellular_component	intracellular organelle
J	0009523	cellular_component	photosystem II
J	0009539	cellular_component	photosystem II reaction center
J	0009579	cellular_component	thylakoid
J	0015979	biological_process	photosynthesis
J	0016020	cellular_component	membrane
J	0031676	cellular_component	plasma membrane-derived thylakoid membrane
J	0042651	cellular_component	thylakoid membrane
K	0005737	cellular_component	cytoplasm
K	0009523	cellular_component	photosystem II
K	0009539	cellular_component	photosystem II reaction center
K	0009579	cellular_component	thylakoid
K	0015979	biological_process	photosynthesis
K	0016020	cellular_component	membrane
K	0031676	cellular_component	plasma membrane-derived thylakoid membrane
K	0043229	cellular_component	intracellular organelle
L	0005737	cellular_component	cytoplasm
L	0009523	cellular_component	photosystem II
L	0009539	cellular_component	photosystem II reaction center
L	0009579	cellular_component	thylakoid
L	0015979	biological_process	photosynthesis
L	0016020	cellular_component	membrane
L	0031676	cellular_component	plasma membrane-derived thylakoid membrane
L	0042651	cellular_component	thylakoid membrane
L	0043229	cellular_component	intracellular organelle
M	0009523	cellular_component	photosystem II
M	0015979	biological_process	photosynthesis
M	0016020	cellular_component	membrane
M	0019684	biological_process	photosynthesis, light reaction
O	0009523	cellular_component	photosystem II
O	0009579	cellular_component	thylakoid
O	0009654	cellular_component	photosystem II oxygen evolving complex
O	0010207	biological_process	photosystem II assembly
O	0010242	molecular_function	oxygen evolving activity
O	0015979	biological_process	photosynthesis
O	0016020	cellular_component	membrane
O	0031676	cellular_component	plasma membrane-derived thylakoid membrane
O	0042549	biological_process	photosystem II stabilization
R	0009523	cellular_component	photosystem II
R	0009579	cellular_component	thylakoid
R	0015979	biological_process	photosynthesis
R	0016020	cellular_component	membrane
R	0030145	molecular_function	manganese ion binding
R	0031676	cellular_component	plasma membrane-derived thylakoid membrane
T	0009523	cellular_component	photosystem II
T	0009539	cellular_component	photosystem II reaction center
T	0009579	cellular_component	thylakoid
T	0015979	biological_process	photosynthesis
T	0016020	cellular_component	membrane
T	0031676	cellular_component	plasma membrane-derived thylakoid membrane
T	0042651	cellular_component	thylakoid membrane
U	0009523	cellular_component	photosystem II
U	0009579	cellular_component	thylakoid
U	0009654	cellular_component	photosystem II oxygen evolving complex
U	0015979	biological_process	photosynthesis
U	0016020	cellular_component	membrane
U	0019898	cellular_component	extrinsic component of membrane
U	0031676	cellular_component	plasma membrane-derived thylakoid membrane
U	0042549	biological_process	photosystem II stabilization
V	0005506	molecular_function	iron ion binding
V	0009055	molecular_function	electron transfer activity
V	0009523	cellular_component	photosystem II
V	0015979	biological_process	photosynthesis
V	0020037	molecular_function	heme binding
V	0022904	biological_process	respiratory electron transport chain
V	0042651	cellular_component	thylakoid membrane
X	0009523	cellular_component	photosystem II
X	0009579	cellular_component	thylakoid
X	0015979	biological_process	photosynthesis
X	0016020	cellular_component	membrane
X	0031676	cellular_component	plasma membrane-derived thylakoid membrane
Y	0009523	cellular_component	photosystem II
Y	0009579	cellular_component	thylakoid
Y	0015979	biological_process	photosynthesis
Y	0016020	cellular_component	membrane
Y	0031676	cellular_component	plasma membrane-derived thylakoid membrane
Z	0009523	cellular_component	photosystem II
Z	0009539	cellular_component	photosystem II reaction center
Z	0009579	cellular_component	thylakoid
Z	0015979	biological_process	photosynthesis
Z	0016020	cellular_component	membrane
Z	0031676	cellular_component	plasma membrane-derived thylakoid membrane
Z	0042549	biological_process	photosystem II stabilization
Z	0042651	cellular_component	thylakoid membrane

Functional Information from PROSITE/UniProt

site_id	PS00244
Number of Residues	27
Details	REACTION_CENTER Photosynthetic reaction center proteins signature. NwtlnPfHmmGvagvlggallcAiHGA

Chain	Residue	Details
D	ASN190-ALA216
A	ASN191-SER217

---

site_id	PS00537
Number of Residues	15
Details	CYTOCHROME_B559 Cytochrome b559 subunits heme-binding site signature. ItSVRYwvIHSITIP

Chain	Residue	Details
E	ILE14-PRO28
F	ILE15-PRO29

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	10
Details	TOPO_DOM: Cytoplasmic => ECO:0000269|PubMed:21499260

Chain	Residue	Details
J	MET1-TRP11
D	GLY124-PRO140
D	VAL152-SER165
D	GLY207-GLU227
D	GLY278-ARG294

---

site_id	SWS_FT_FI2
Number of Residues	14
Details	TRANSMEM: Helical => ECO:0000269|PubMed:21499260

Chain	Residue	Details
J	ILE12-GLY26
D	SER166-GLY206
D	SER295-LEU352
C	THR255-SER275
C	TRP291-ALA312
C	ARG447-SER471

---

site_id	SWS_FT_FI3
Number of Residues	13
Details	TOPO_DOM: Lumenal => ECO:0000269|PubMed:21499260

Chain	Residue	Details
J	LEU27-LEU40
D	GLY228-THR277
C	GLN313-GLY446

---

site_id	SWS_FT_FI4
Number of Residues	1
Details	MOD_RES: Blocked amino end (Met) => ECO:0000269|DOI:10.1016/0014-5793(89)81446-2

Chain	Residue	Details
I	FME1
C	PHE437
C	GLY440
B	HIS466
B	HIS469
C	LEU49
C	ALA52
C	VAL114
C	GLY128
C	ILE160
C	VAL233
C	GLY247
C	LEU426

---

site_id	SWS_FT_FI5
Number of Residues	2
Details	BINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_01383, ECO:0000269|PubMed:21499260, ECO:0000269|PubMed:23426624

Chain	Residue	Details
D	GLN129
D	PHE261

---

site_id	SWS_FT_FI6
Number of Residues	3
Details	BINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_01383, ECO:0000269|PubMed:21499260, ECO:0000269|PubMed:23426624, ECO:0000303|PubMed:19433803

Chain	Residue	Details
D	ASN142
D	HIS214
D	HIS268

---

site_id	SWS_FT_FI7
Number of Residues	1
Details	BINDING: axial binding residue => ECO:0000255|HAMAP-Rule:MF_01383, ECO:0000269|PubMed:21499260, ECO:0000269|PubMed:23426624

Chain	Residue	Details
D	HIS197

---

site_id	SWS_FT_FI8
Number of Residues	2
Details	BINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_01379, ECO:0000269|PubMed:21499260, ECO:0000269|PubMed:23426624, ECO:0000303|PubMed:12518057, ECO:0000303|PubMed:19433803

Chain	Residue	Details
A	ASP170
A	ALA344

---

site_id	SWS_FT_FI9
Number of Residues	7
Details	BINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_01379, ECO:0000269|PubMed:21499260, ECO:0000269|PubMed:23426624, ECO:0000303|PubMed:19433803

Chain	Residue	Details
A	GLU189
A	HIS215
A	SER264
A	HIS272
A	HIS332
A	GLU333
A	ASP342

---

site_id	SWS_FT_FI10
Number of Residues	1
Details	BINDING: axial binding residue => ECO:0000255|HAMAP-Rule:MF_01379, ECO:0000269|PubMed:21499260, ECO:0000269|PubMed:23426624

Chain	Residue	Details
A	HIS198

---

site_id	SWS_FT_FI11
Number of Residues	1
Details	BINDING: BINDING => ECO:0000269|PubMed:19433803, ECO:0000269|PubMed:21499260

Chain	Residue	Details
A	MET214

---

site_id	SWS_FT_FI12
Number of Residues	1
Details	SITE: Tyrosine radical intermediate => ECO:0000255|HAMAP-Rule:MF_01379, ECO:0000269|PubMed:21499260, ECO:0000303|PubMed:12518057, ECO:0000303|PubMed:23426624

Chain	Residue	Details
A	TYR161

---

site_id	SWS_FT_FI13
Number of Residues	1
Details	SITE: Stabilizes free radical intermediate => ECO:0000255|HAMAP-Rule:MF_01379

Chain	Residue	Details
A	HIS190

---

site_id	SWS_FT_FI14
Number of Residues	1
Details	SITE: Cleavage; by CtpA => ECO:0000255|HAMAP-Rule:MF_01379

Chain	Residue	Details
A	ALA344

---