7E20
Cryo EM structure of a K+-bound Na+,K+-ATPase in the E2 state
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000166 | molecular_function | nucleotide binding |
| A | 0002028 | biological_process | regulation of sodium ion transport |
| A | 0005215 | molecular_function | transporter activity |
| A | 0005391 | molecular_function | P-type sodium:potassium-exchanging transporter activity |
| A | 0005515 | molecular_function | protein binding |
| A | 0005524 | molecular_function | ATP binding |
| A | 0005765 | cellular_component | lysosomal membrane |
| A | 0005783 | cellular_component | endoplasmic reticulum |
| A | 0005794 | cellular_component | Golgi apparatus |
| A | 0005886 | cellular_component | plasma membrane |
| A | 0005890 | cellular_component | sodium:potassium-exchanging ATPase complex |
| A | 0006813 | biological_process | potassium ion transport |
| A | 0006883 | biological_process | intracellular sodium ion homeostasis |
| A | 0007231 | biological_process | osmosensory signaling pathway |
| A | 0008556 | molecular_function | P-type potassium transmembrane transporter activity |
| A | 0010248 | biological_process | establishment or maintenance of transmembrane electrochemical gradient |
| A | 0014069 | cellular_component | postsynaptic density |
| A | 0016020 | cellular_component | membrane |
| A | 0016323 | cellular_component | basolateral plasma membrane |
| A | 0016324 | cellular_component | apical plasma membrane |
| A | 0016328 | cellular_component | lateral plasma membrane |
| A | 0016791 | molecular_function | phosphatase activity |
| A | 0016887 | molecular_function | ATP hydrolysis activity |
| A | 0030007 | biological_process | intracellular potassium ion homeostasis |
| A | 0030315 | cellular_component | T-tubule |
| A | 0030424 | cellular_component | axon |
| A | 0030955 | molecular_function | potassium ion binding |
| A | 0031402 | molecular_function | sodium ion binding |
| A | 0032991 | cellular_component | protein-containing complex |
| A | 0035725 | biological_process | sodium ion transmembrane transport |
| A | 0036126 | cellular_component | sperm flagellum |
| A | 0036376 | biological_process | sodium ion export across plasma membrane |
| A | 0042383 | cellular_component | sarcolemma |
| A | 0042470 | cellular_component | melanosome |
| A | 0044325 | molecular_function | transmembrane transporter binding |
| A | 0045121 | cellular_component | membrane raft |
| A | 0051087 | molecular_function | protein-folding chaperone binding |
| A | 0055078 | biological_process | sodium ion homeostasis |
| A | 0055119 | biological_process | relaxation of cardiac muscle |
| A | 0060342 | cellular_component | photoreceptor inner segment membrane |
| A | 0070062 | cellular_component | extracellular exosome |
| A | 0071383 | biological_process | cellular response to steroid hormone stimulus |
| A | 0071805 | biological_process | potassium ion transmembrane transport |
| A | 0086002 | biological_process | cardiac muscle cell action potential involved in contraction |
| A | 0086009 | biological_process | membrane repolarization |
| A | 0086013 | biological_process | membrane repolarization during cardiac muscle cell action potential |
| A | 0086064 | biological_process | cell communication by electrical coupling involved in cardiac conduction |
| A | 1902600 | biological_process | proton transmembrane transport |
| A | 1903416 | biological_process | response to glycoside |
| A | 1903561 | cellular_component | extracellular vesicle |
| A | 1990239 | molecular_function | steroid hormone binding |
| A | 1990573 | biological_process | potassium ion import across plasma membrane |
| B | 0001666 | biological_process | response to hypoxia |
| B | 0001671 | molecular_function | ATPase activator activity |
| B | 0005391 | molecular_function | P-type sodium:potassium-exchanging transporter activity |
| B | 0005515 | molecular_function | protein binding |
| B | 0005765 | cellular_component | lysosomal membrane |
| B | 0005886 | cellular_component | plasma membrane |
| B | 0005890 | cellular_component | sodium:potassium-exchanging ATPase complex |
| B | 0005901 | cellular_component | caveola |
| B | 0006813 | biological_process | potassium ion transport |
| B | 0006814 | biological_process | sodium ion transport |
| B | 0006874 | biological_process | intracellular calcium ion homeostasis |
| B | 0006883 | biological_process | intracellular sodium ion homeostasis |
| B | 0010248 | biological_process | establishment or maintenance of transmembrane electrochemical gradient |
| B | 0010468 | biological_process | regulation of gene expression |
| B | 0010882 | biological_process | regulation of cardiac muscle contraction by calcium ion signaling |
| B | 0014704 | cellular_component | intercalated disc |
| B | 0016020 | cellular_component | membrane |
| B | 0016323 | cellular_component | basolateral plasma membrane |
| B | 0016324 | cellular_component | apical plasma membrane |
| B | 0016328 | cellular_component | lateral plasma membrane |
| B | 0019901 | molecular_function | protein kinase binding |
| B | 0023026 | molecular_function | MHC class II protein complex binding |
| B | 0030001 | biological_process | metal ion transport |
| B | 0030007 | biological_process | intracellular potassium ion homeostasis |
| B | 0030315 | cellular_component | T-tubule |
| B | 0030674 | molecular_function | protein-macromolecule adaptor activity |
| B | 0035725 | biological_process | sodium ion transmembrane transport |
| B | 0036126 | cellular_component | sperm flagellum |
| B | 0036376 | biological_process | sodium ion export across plasma membrane |
| B | 0042383 | cellular_component | sarcolemma |
| B | 0044861 | biological_process | protein transport into plasma membrane raft |
| B | 0046034 | biological_process | ATP metabolic process |
| B | 0046982 | molecular_function | protein heterodimerization activity |
| B | 0050821 | biological_process | protein stabilization |
| B | 0051117 | molecular_function | ATPase binding |
| B | 0055119 | biological_process | relaxation of cardiac muscle |
| B | 0060048 | biological_process | cardiac muscle contraction |
| B | 0070062 | cellular_component | extracellular exosome |
| B | 0072659 | biological_process | protein localization to plasma membrane |
| B | 0086009 | biological_process | membrane repolarization |
| B | 0086013 | biological_process | membrane repolarization during cardiac muscle cell action potential |
| B | 0086064 | biological_process | cell communication by electrical coupling involved in cardiac conduction |
| B | 0141109 | molecular_function | transporter activator activity |
| B | 1902600 | biological_process | proton transmembrane transport |
| B | 1903169 | biological_process | regulation of calcium ion transmembrane transport |
| B | 1903278 | biological_process | positive regulation of sodium ion export across plasma membrane |
| B | 1903288 | biological_process | positive regulation of potassium ion import across plasma membrane |
| B | 1903561 | cellular_component | extracellular vesicle |
| B | 1990573 | biological_process | potassium ion import across plasma membrane |
| C | 0001671 | molecular_function | ATPase activator activity |
| C | 0005886 | cellular_component | plasma membrane |
| C | 0005890 | cellular_component | sodium:potassium-exchanging ATPase complex |
| C | 0006811 | biological_process | monoatomic ion transport |
| C | 0006812 | biological_process | monoatomic cation transport |
| C | 0008285 | biological_process | negative regulation of cell population proliferation |
| C | 0010248 | biological_process | establishment or maintenance of transmembrane electrochemical gradient |
| C | 0016020 | cellular_component | membrane |
| C | 0016323 | cellular_component | basolateral plasma membrane |
| C | 0017080 | molecular_function | sodium channel regulator activity |
| C | 0030674 | molecular_function | protein-macromolecule adaptor activity |
| C | 0036376 | biological_process | sodium ion export across plasma membrane |
| C | 0043269 | biological_process | regulation of monoatomic ion transport |
| C | 0055085 | biological_process | transmembrane transport |
| C | 0070062 | cellular_component | extracellular exosome |
| C | 0071475 | biological_process | cellular hyperosmotic salinity response |
| C | 0099106 | molecular_function | ion channel regulator activity |
| C | 1902600 | biological_process | proton transmembrane transport |
| C | 1903278 | biological_process | positive regulation of sodium ion export across plasma membrane |
| C | 1990573 | biological_process | potassium ion import across plasma membrane |
Functional Information from PROSITE/UniProt
| site_id | PS00390 |
| Number of Residues | 21 |
| Details | ATPASE_NA_K_BETA_1 Sodium and potassium ATPases beta subunits signature 1. WkkFiWNsekkefLGRTggsW |
| Chain | Residue | Details |
| B | TRP12-TRP32 |
| site_id | PS00391 |
| Number of Residues | 16 |
| Details | ATPASE_NA_K_BETA_2 Sodium and potassium ATPases beta subunits signature 2. RkvCRfklewLgnCSG |
| Chain | Residue | Details |
| B | ARG146-GLY161 |
| site_id | PS01310 |
| Number of Residues | 14 |
| Details | FXYD FXYD family signature. DpFyYDyeTVRngG |
| Chain | Residue | Details |
| C | ASP17-GLY30 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 191 |
| Details | Transmembrane: {"description":"Helical","evidences":[{"source":"PubMed","id":"35803952","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7E20","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 81 |
| Details | Topological domain: {"description":"Extracellular","evidences":[{"evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 617 |
| Details | Topological domain: {"description":"Cytoplasmic","evidences":[{"evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 23 |
| Details | Transmembrane: {"description":"Helical","evidences":[{"evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"35803952","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7E20","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 2 |
| Details | Region: {"description":"Phosphoinositide-3 kinase binding","evidences":[{"evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI6 |
| Number of Residues | 19 |
| Details | Region: {"description":"Disordered","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI7 |
| Number of Residues | 121 |
| Details | Region: {"description":"Mediates interaction with SCN7A","evidences":[{"source":"UniProtKB","id":"Q8VDN2","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI8 |
| Number of Residues | 1 |
| Details | Active site: {"description":"4-aspartylphosphate intermediate","evidences":[{"source":"UniProtKB","id":"P19156","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI9 |
| Number of Residues | 14 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"35803952","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7E20","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI10 |
| Number of Residues | 3 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"35803952","evidenceCode":"ECO:0000269"},{"source":"Reference","evidenceCode":"ECO:0000269","citation":{"citationType":"submission","publicationDate":"NOV-2024","submissionDatabase":"PDB data bank","title":"Structural basis of a sodium pump quaternary complex leading phospholipid scrambling in the living cell.","authors":["Dou Y.","Abe K.","Suzuki J."]}},{"source":"PDB","id":"7E20","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"9KCI","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"9KCK","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI11 |
| Number of Residues | 9 |
| Details | Binding site: {"evidences":[{"source":"UniProtKB","id":"P05024","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI12 |
| Number of Residues | 1 |
| Details | Binding site: {"evidences":[{"source":"Reference","evidenceCode":"ECO:0000269","citation":{"citationType":"submission","publicationDate":"NOV-2024","submissionDatabase":"PDB data bank","title":"Structural basis of a sodium pump quaternary complex leading phospholipid scrambling in the living cell.","authors":["Dou Y.","Abe K.","Suzuki J."]}},{"source":"PDB","id":"9KCG","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI13 |
| Number of Residues | 1 |
| Details | Binding site: {"description":"covalent","evidences":[{"source":"PubMed","id":"35803952","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7E20","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI14 |
| Number of Residues | 4 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P06685","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI15 |
| Number of Residues | 3 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"Q8VDN2","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI16 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphotyrosine","evidences":[{"source":"UniProtKB","id":"Q8VDN2","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI17 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphotyrosine","evidences":[{"source":"PubMed","id":"19690332","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI18 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-succinyllysine","evidences":[{"source":"UniProtKB","id":"Q8VDN2","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI19 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphoserine; by PKA","evidences":[{"source":"UniProtKB","id":"P06685","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI20 |
| Number of Residues | 27 |
| Details | Transmembrane: {"description":"Helical; Signal-anchor for type II membrane protein","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI21 |
| Number of Residues | 240 |
| Details | Topological domain: {"description":"Extracellular","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI22 |
| Number of Residues | 112 |
| Details | Region: {"description":"immunoglobulin-like"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI23 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P07340","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI24 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphotyrosine","evidences":[{"source":"UniProtKB","id":"P14094","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI25 |
| Number of Residues | 2 |
| Details | Glycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"source":"PubMed","id":"12754519","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"19159218","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI26 |
| Number of Residues | 1 |
| Details | Glycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"source":"PubMed","id":"12754519","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"19159218","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"19349973","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI27 |
| Number of Residues | 17 |
| Details | Transmembrane: {"description":"Helical","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |






