7D4U
ATP complex with double mutant cyclic trinucleotide synthase CdnD
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0005524 | molecular_function | ATP binding |
| A | 0005525 | molecular_function | GTP binding |
| A | 0009117 | biological_process | nucleotide metabolic process |
| A | 0016779 | molecular_function | nucleotidyltransferase activity |
| A | 0046872 | molecular_function | metal ion binding |
| A | 0051607 | biological_process | defense response to virus |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 15 |
| Details | binding site for residue ATP A 401 |
| Chain | Residue |
| A | GLY52 |
| A | ATP402 |
| A | HOH513 |
| A | HOH527 |
| A | HOH534 |
| A | HOH539 |
| A | HOH552 |
| A | SER53 |
| A | ARG56 |
| A | LYS71 |
| A | GLN210 |
| A | GLY249 |
| A | TYR250 |
| A | ASP296 |
| A | VAL304 |
| site_id | AC2 |
| Number of Residues | 15 |
| Details | binding site for residue ATP A 402 |
| Chain | Residue |
| A | GLN51 |
| A | ARG109 |
| A | LEU194 |
| A | ASP196 |
| A | ARG197 |
| A | ARG204 |
| A | THR205 |
| A | HIS302 |
| A | ARG307 |
| A | ATP401 |
| A | HOH501 |
| A | HOH502 |
| A | HOH522 |
| A | HOH540 |
| A | HOH543 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 3 |
| Details | ACT_SITE: ACT_SITE => ECO:0000305|PubMed:33836064, ECO:0000305|PubMed:34077735 |
| Chain | Residue | Details |
| A | LYS69 | |
| A | LYS71 | |
| A | ASP121 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 6 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:34077735, ECO:0000305|PubMed:33836064, ECO:0000305|PubMed:36755092, ECO:0007744|PDB:7D4O, ECO:0007744|PDB:7LJL, ECO:0007744|PDB:7TO3, ECO:0007744|PDB:7TQD |
| Chain | Residue | Details |
| A | GLN51 | |
| A | ARG109 | |
| A | ARG197 | |
| A | ARG204 | |
| A | THR205 | |
| A | ARG307 |
| site_id | SWS_FT_FI3 |
| Number of Residues | 1 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:33836064, ECO:0000269|PubMed:34077735, ECO:0000269|PubMed:36755092, ECO:0007744|PDB:7D4O, ECO:0007744|PDB:7LJL, ECO:0007744|PDB:7TO3 |
| Chain | Residue | Details |
| A | SER53 |
| site_id | SWS_FT_FI4 |
| Number of Residues | 1 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:33836064, ECO:0000269|PubMed:34077735, ECO:0000269|PubMed:36755092, ECO:0007744|PDB:7D4O, ECO:0007744|PDB:7LJL, ECO:0007744|PDB:7TO3, ECO:0007744|PDB:7TQD |
| Chain | Residue | Details |
| A | ARG56 |
| site_id | SWS_FT_FI5 |
| Number of Residues | 1 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:33836064, ECO:0000269|PubMed:34077735, ECO:0000312|PDB:7D4S, ECO:0007744|PDB:7D4O, ECO:0007744|PDB:7LJL, ECO:0007744|PDB:7TO3, ECO:0007744|PDB:7TQD |
| Chain | Residue | Details |
| A | LYS69 |
| site_id | SWS_FT_FI6 |
| Number of Residues | 1 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:33836064, ECO:0000269|PubMed:34077735, ECO:0000312|PDB:7D4J, ECO:0007744|PDB:7D4O, ECO:0007744|PDB:7LJL, ECO:0007744|PDB:7TO3, ECO:0007744|PDB:7TQD |
| Chain | Residue | Details |
| A | LYS71 |
| site_id | SWS_FT_FI7 |
| Number of Residues | 1 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:33836064, ECO:0000269|PubMed:34077735, ECO:0000312|PDB:7D4S, ECO:0007744|PDB:7D4O, ECO:0007744|PDB:7LJL |
| Chain | Residue | Details |
| A | ASP121 |
| site_id | SWS_FT_FI8 |
| Number of Residues | 1 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:34077735, ECO:0007744|PDB:7LJL |
| Chain | Residue | Details |
| A | ASP196 |
| site_id | SWS_FT_FI9 |
| Number of Residues | 1 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:33836064, ECO:0000269|PubMed:34077735, ECO:0007744|PDB:7D4O, ECO:0007744|PDB:7LJL, ECO:0007744|PDB:7TO3, ECO:0007744|PDB:7TQD |
| Chain | Residue | Details |
| A | GLN210 |
| site_id | SWS_FT_FI10 |
| Number of Residues | 1 |
| Details | BINDING: BINDING => ECO:0007744|PDB:7TO3, ECO:0007744|PDB:7TQD |
| Chain | Residue | Details |
| A | LYS233 |
| site_id | SWS_FT_FI11 |
| Number of Residues | 1 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:34077735, ECO:0007744|PDB:7LJL, ECO:0007744|PDB:7TO3, ECO:0007744|PDB:7TQD |
| Chain | Residue | Details |
| A | TYR250 |
| site_id | SWS_FT_FI12 |
| Number of Residues | 2 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:33836064, ECO:0000269|PubMed:34077735, ECO:0000312|PDB:7D4J, ECO:0000312|PDB:7D4S, ECO:0007744|PDB:7D4O, ECO:0007744|PDB:7LJL |
| Chain | Residue | Details |
| A | ASN258 | |
| A | LEU260 |
| site_id | SWS_FT_FI13 |
| Number of Residues | 1 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:33836064, ECO:0000269|PubMed:34077735, ECO:0007744|PDB:7D4O, ECO:0007744|PDB:7LJL |
| Chain | Residue | Details |
| A | VAL304 |
| site_id | SWS_FT_FI14 |
| Number of Residues | 1 |
| Details | SITE: Important for GTP discrimination => ECO:0000269|PubMed:34077735 |
| Chain | Residue | Details |
| A | GLN51 |
