7D19
Crystal structure of mouse Cryptochrome 1 in complex with compound TH129
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 14 |
| Details | binding site for residue GOC A 501 |
| Chain | Residue |
| A | TRP292 |
| A | TRP399 |
| A | LEU400 |
| A | GLN407 |
| A | PHE409 |
| B | GLU196 |
| A | HIS355 |
| A | ARG358 |
| A | PHE381 |
| A | ASP387 |
| A | ILE392 |
| A | ASN393 |
| A | SER396 |
| A | TRP397 |
| site_id | AC2 |
| Number of Residues | 14 |
| Details | binding site for residue GOC B 501 |
| Chain | Residue |
| A | GLU196 |
| B | GLN289 |
| B | TRP292 |
| B | HIS355 |
| B | ARG358 |
| B | PHE381 |
| B | ASP387 |
| B | ILE392 |
| B | ASN393 |
| B | SER396 |
| B | TRP399 |
| B | LEU400 |
| B | GLN407 |
| B | PHE409 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 258 |
| Details | Domain: {"description":"Photolyase/cryptochrome alpha/beta"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 198 |
| Details | Region: {"description":"Required for inhibition of CLOCK-BMAL1-mediated transcription","evidences":[{"source":"PubMed","id":"16478995","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 8 |
| Details | Motif: {"description":"LIR 1","evidences":[{"source":"PubMed","id":"29937374","evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 10 |
| Details | Motif: {"description":"LIR 2","evidences":[{"source":"PubMed","id":"29937374","evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 10 |
| Details | Motif: {"description":"LIR 3","evidences":[{"source":"PubMed","id":"29937374","evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI6 |
| Number of Residues | 10 |
| Details | Motif: {"description":"LIR 4","evidences":[{"source":"PubMed","id":"29937374","evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI7 |
| Number of Residues | 10 |
| Details | Motif: {"description":"LIR 5","evidences":[{"source":"PubMed","id":"29937374","evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI8 |
| Number of Residues | 10 |
| Details | Motif: {"description":"LIR 6","evidences":[{"source":"PubMed","id":"29937374","evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI9 |
| Number of Residues | 8 |
| Details | Motif: {"description":"LIR 7","evidences":[{"source":"PubMed","id":"29937374","evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI10 |
| Number of Residues | 10 |
| Details | Motif: {"description":"LIR 8","evidences":[{"source":"PubMed","id":"29937374","evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI11 |
| Number of Residues | 10 |
| Details | Motif: {"description":"LIR 9","evidences":[{"source":"PubMed","id":"29937374","evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI12 |
| Number of Residues | 10 |
| Details | Motif: {"description":"LIR 10","evidences":[{"source":"PubMed","id":"29937374","evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI13 |
| Number of Residues | 10 |
| Details | Motif: {"description":"LIR 11","evidences":[{"source":"PubMed","id":"29937374","evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI14 |
| Number of Residues | 5 |
| Details | Motif: {"description":"LIR 12","evidences":[{"source":"PubMed","id":"29937374","evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI15 |
| Number of Residues | 10 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"23746849","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI16 |
| Number of Residues | 4 |
| Details | Modified residue: {"description":"Phosphoserine; by AMPK","evidences":[{"source":"PubMed","id":"19833968","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI17 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"Phosphoserine; by MAPK","evidences":[{"source":"PubMed","id":"15298678","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI18 |
| Number of Residues | 2 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"PubMed","id":"23452855","evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI19 |
| Number of Residues | 10 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"PubMed","id":"23452856","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
