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7CDB

Structure of GABARAPL1 in complex with GABA(A) receptor gamma 2

Functional Information from GO Data
ChainGOidnamespacecontents
A0000045biological_processautophagosome assembly
A0000421cellular_componentautophagosome membrane
A0005515molecular_functionprotein binding
A0005543molecular_functionphospholipid binding
A0005737cellular_componentcytoplasm
A0005739cellular_componentmitochondrion
A0005776cellular_componentautophagosome
A0005783cellular_componentendoplasmic reticulum
A0005794cellular_componentGolgi apparatus
A0005856cellular_componentcytoskeleton
A0005874cellular_componentmicrotubule
A0006914biological_processautophagy
A0006995biological_processcellular response to nitrogen starvation
A0008092molecular_functioncytoskeletal protein binding
A0008429molecular_functionphosphatidylethanolamine binding
A0016020cellular_componentmembrane
A0030659cellular_componentcytoplasmic vesicle membrane
A0030957molecular_functionTat protein binding
A0031410cellular_componentcytoplasmic vesicle
A0031625molecular_functionubiquitin protein ligase binding
A0032590cellular_componentdendrite membrane
A0032839cellular_componentdendrite cytoplasm
A0043495molecular_functionprotein-membrane adaptor activity
A0044297cellular_componentcell body
A0050811molecular_functionGABA receptor binding
A0061723biological_processglycophagy
A0061753biological_processsubstrate localization to autophagosome
A0097352biological_processautophagosome maturation
B0000045biological_processautophagosome assembly
B0000421cellular_componentautophagosome membrane
B0005515molecular_functionprotein binding
B0005543molecular_functionphospholipid binding
B0005737cellular_componentcytoplasm
B0005739cellular_componentmitochondrion
B0005776cellular_componentautophagosome
B0005783cellular_componentendoplasmic reticulum
B0005794cellular_componentGolgi apparatus
B0005856cellular_componentcytoskeleton
B0005874cellular_componentmicrotubule
B0006914biological_processautophagy
B0006995biological_processcellular response to nitrogen starvation
B0008092molecular_functioncytoskeletal protein binding
B0008429molecular_functionphosphatidylethanolamine binding
B0016020cellular_componentmembrane
B0030659cellular_componentcytoplasmic vesicle membrane
B0030957molecular_functionTat protein binding
B0031410cellular_componentcytoplasmic vesicle
B0031625molecular_functionubiquitin protein ligase binding
B0032590cellular_componentdendrite membrane
B0032839cellular_componentdendrite cytoplasm
B0043495molecular_functionprotein-membrane adaptor activity
B0044297cellular_componentcell body
B0050811molecular_functionGABA receptor binding
B0061723biological_processglycophagy
B0061753biological_processsubstrate localization to autophagosome
B0097352biological_processautophagosome maturation
Functional Information from PDB Data
site_idAC1
Number of Residues7
Detailsbinding site for residue CIT A 201
ChainResidue
ATYR5
AHIS9
ATYR13
AARG47
ALYS48
AHOH318
AHOH335

site_idAC2
Number of Residues4
Detailsbinding site for residue ACT A 202
ChainResidue
AGLU101
AHOH316
ALYS6
AARG14

site_idAC3
Number of Residues10
Detailsbinding site for residue CIT B 201
ChainResidue
ALYS46
AARG67
BTYR5
BHIS9
BARG47
BLYS48
BHOH307
BHOH317
CTYR51
CHOH101

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsSITE: Cleavage; by ATG4B => ECO:0000269|PubMed:16704426
ChainResidueDetails
AGLY116
BGLY116

site_idSWS_FT_FI2
Number of Residues2
DetailsLIPID: Phosphatidylserine amidated glycine; alternate => ECO:0000250|UniProtKB:Q9H0R8
ChainResidueDetails
AGLY116
BGLY116

221051

PDB entries from 2024-06-12

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