Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7BY9

Malate Dehydrogenase from Geobacillus stearothermophilus (gs-MDH) complexed with Oxaloacetic Acid (OAA) and Nicotinamide Adenine Dinucleotide (NAD)

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0003824molecular_functioncatalytic activity
A0004459molecular_functionL-lactate dehydrogenase activity
A0006089biological_processlactate metabolic process
A0006090biological_processpyruvate metabolic process
A0006099biological_processtricarboxylic acid cycle
A0016491molecular_functionoxidoreductase activity
A0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
A0019752biological_processcarboxylic acid metabolic process
A0030060molecular_functionL-malate dehydrogenase (NAD+) activity
B0000166molecular_functionnucleotide binding
B0003824molecular_functioncatalytic activity
B0004459molecular_functionL-lactate dehydrogenase activity
B0006089biological_processlactate metabolic process
B0006090biological_processpyruvate metabolic process
B0006099biological_processtricarboxylic acid cycle
B0016491molecular_functionoxidoreductase activity
B0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
B0019752biological_processcarboxylic acid metabolic process
B0030060molecular_functionL-malate dehydrogenase (NAD+) activity
C0000166molecular_functionnucleotide binding
C0003824molecular_functioncatalytic activity
C0004459molecular_functionL-lactate dehydrogenase activity
C0006089biological_processlactate metabolic process
C0006090biological_processpyruvate metabolic process
C0006099biological_processtricarboxylic acid cycle
C0016491molecular_functionoxidoreductase activity
C0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
C0019752biological_processcarboxylic acid metabolic process
C0030060molecular_functionL-malate dehydrogenase (NAD+) activity
D0000166molecular_functionnucleotide binding
D0003824molecular_functioncatalytic activity
D0004459molecular_functionL-lactate dehydrogenase activity
D0006089biological_processlactate metabolic process
D0006090biological_processpyruvate metabolic process
D0006099biological_processtricarboxylic acid cycle
D0016491molecular_functionoxidoreductase activity
D0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
D0019752biological_processcarboxylic acid metabolic process
D0030060molecular_functionL-malate dehydrogenase (NAD+) activity
Functional Information from PDB Data
site_idAC1
Number of Residues21
Detailsbinding site for residue NAD A 400
ChainResidue
AGLY11
AGLY83
AILE84
AILE102
AGLN105
AVAL106
ALEU122
AASN124
AVAL126
AGLN147
AHIS179
AGLY13
ASER228
AHOH501
APHE14
ATHR15
AASP35
AILE36
ALEU39
ATHR81
AALA82

site_idAC2
Number of Residues7
Detailsbinding site for residue OAA A 401
ChainResidue
AASN124
ALEU151
AARG155
AHIS179
AGLY217
AVAL221
AALA229

site_idAC3
Number of Residues18
Detailsbinding site for residue NAD B 400
ChainResidue
BGLY13
BPHE14
BTHR15
BASP35
BLEU39
BTHR81
BALA82
BGLY83
BILE102
BVAL106
BLEU122
BTHR123
BASN124
BGLN147
BLEU151
BALA229
BPRO233
BOAA401

site_idAC4
Number of Residues5
Detailsbinding site for residue OAA B 401
ChainResidue
BASN124
BLEU151
BARG155
BHIS179
BNAD400

site_idAC5
Number of Residues16
Detailsbinding site for residue NAD C 400
ChainResidue
CGLY13
CPHE14
CTHR15
CASP35
CTHR81
CALA82
CGLY83
CASN99
CILE102
CLEU122
CTHR123
CASN124
CVAL126
CGLN147
CHIS179
COAA401

site_idAC6
Number of Residues8
Detailsbinding site for residue OAA C 401
ChainResidue
CASN124
CLEU151
CARG155
CHIS179
CGLY217
CSER228
CALA229
CNAD400

site_idAC7
Number of Residues23
Detailsbinding site for residue NAD D 400
ChainResidue
DGLY11
DGLY13
DPHE14
DTHR15
DASP35
DILE36
DLEU39
DTYR69
DTHR81
DALA82
DGLY83
DGLN105
DLEU122
DTHR123
DASN124
DGLN147
DLEU151
DHIS179
DALA229
DPRO233
DOAA401
DHOH502
DHOH505

site_idAC8
Number of Residues5
Detailsbinding site for residue OAA D 401
ChainResidue
DLEU151
DARG155
DHIS179
DNAD400
DASN124

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon