7BT2
Crystal structure of the SERCA2a in the E2.ATP state
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000045 | biological_process | autophagosome assembly |
A | 0000166 | molecular_function | nucleotide binding |
A | 0002026 | biological_process | regulation of the force of heart contraction |
A | 0003012 | biological_process | muscle system process |
A | 0005215 | molecular_function | transporter activity |
A | 0005246 | molecular_function | calcium channel regulator activity |
A | 0005388 | molecular_function | P-type calcium transporter activity |
A | 0005509 | molecular_function | calcium ion binding |
A | 0005515 | molecular_function | protein binding |
A | 0005524 | molecular_function | ATP binding |
A | 0005783 | cellular_component | endoplasmic reticulum |
A | 0005789 | cellular_component | endoplasmic reticulum membrane |
A | 0005886 | cellular_component | plasma membrane |
A | 0006811 | biological_process | monoatomic ion transport |
A | 0006816 | biological_process | calcium ion transport |
A | 0006874 | biological_process | intracellular calcium ion homeostasis |
A | 0006937 | biological_process | regulation of muscle contraction |
A | 0006984 | biological_process | ER-nucleus signaling pathway |
A | 0007155 | biological_process | cell adhesion |
A | 0008544 | biological_process | epidermis development |
A | 0010460 | biological_process | positive regulation of heart rate |
A | 0010666 | biological_process | positive regulation of cardiac muscle cell apoptotic process |
A | 0010882 | biological_process | regulation of cardiac muscle contraction by calcium ion signaling |
A | 0014883 | biological_process | transition between fast and slow fiber |
A | 0014898 | biological_process | cardiac muscle hypertrophy in response to stress |
A | 0016020 | cellular_component | membrane |
A | 0016240 | biological_process | autophagosome membrane docking |
A | 0016529 | cellular_component | sarcoplasmic reticulum |
A | 0016887 | molecular_function | ATP hydrolysis activity |
A | 0019899 | molecular_function | enzyme binding |
A | 0031095 | cellular_component | platelet dense tubular network membrane |
A | 0032469 | biological_process | endoplasmic reticulum calcium ion homeostasis |
A | 0032470 | biological_process | positive regulation of endoplasmic reticulum calcium ion concentration |
A | 0033017 | cellular_component | sarcoplasmic reticulum membrane |
A | 0033292 | biological_process | T-tubule organization |
A | 0034220 | biological_process | monoatomic ion transmembrane transport |
A | 0034599 | biological_process | cellular response to oxidative stress |
A | 0034976 | biological_process | response to endoplasmic reticulum stress |
A | 0044325 | molecular_function | transmembrane transporter binding |
A | 0044548 | molecular_function | S100 protein binding |
A | 0045822 | biological_process | negative regulation of heart contraction |
A | 0046872 | molecular_function | metal ion binding |
A | 0070050 | biological_process | neuron cellular homeostasis |
A | 0070296 | biological_process | sarcoplasmic reticulum calcium ion transport |
A | 0070588 | biological_process | calcium ion transmembrane transport |
A | 0086036 | biological_process | regulation of cardiac muscle cell membrane potential |
A | 0086039 | molecular_function | P-type calcium transporter activity involved in regulation of cardiac muscle cell membrane potential |
A | 0097470 | cellular_component | ribbon synapse |
A | 0098909 | biological_process | regulation of cardiac muscle cell action potential involved in regulation of contraction |
A | 0106222 | molecular_function | lncRNA binding |
A | 0140056 | biological_process | organelle localization by membrane tethering |
A | 1903233 | biological_process | regulation of calcium ion-dependent exocytosis of neurotransmitter |
A | 1903515 | biological_process | calcium ion transport from cytosol to endoplasmic reticulum |
A | 1903779 | biological_process | regulation of cardiac conduction |
A | 1990036 | biological_process | calcium ion import into sarcoplasmic reticulum |
A | 1990456 | biological_process | mitochondrion-endoplasmic reticulum membrane tethering |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 21 |
Details | binding site for residue ATP A 1001 |
Chain | Residue |
A | ASP351 |
A | LYS514 |
A | GLY515 |
A | ALA516 |
A | ARG559 |
A | LEU561 |
A | THR624 |
A | GLY625 |
A | ASP626 |
A | ARG677 |
A | HOH1104 |
A | LYS352 |
A | HOH1164 |
A | HOH1170 |
A | THR353 |
A | GLU439 |
A | GLU442 |
A | PHE487 |
A | ARG489 |
A | LYS492 |
A | MET494 |
site_id | AC2 |
Number of Residues | 4 |
Details | binding site for residue K A 1002 |
Chain | Residue |
A | LEU710 |
A | LYS711 |
A | ALA713 |
A | GLU731 |
site_id | AC3 |
Number of Residues | 6 |
Details | binding site for residue PCW A 1003 |
Chain | Residue |
A | LYS252 |
A | PHE256 |
A | GLN259 |
A | LYS824 |
A | LEU827 |
A | ILE828 |
site_id | AC4 |
Number of Residues | 3 |
Details | binding site for residue PCW A 1004 |
Chain | Residue |
A | GLY830 |
A | TRP831 |
A | LEU991 |
site_id | AC5 |
Number of Residues | 2 |
Details | binding site for residue PCW A 1005 |
Chain | Residue |
A | PHE985 |
A | ARG988 |
site_id | AC6 |
Number of Residues | 1 |
Details | binding site for residue PCW A 1006 |
Chain | Residue |
A | ARG324 |
site_id | AC7 |
Number of Residues | 11 |
Details | binding site for residue MPD A 1007 |
Chain | Residue |
A | THR499 |
A | PRO500 |
A | LYS502 |
A | PRO503 |
A | SER504 |
A | THR506 |
A | SER507 |
A | MET508 |
A | PRO662 |
A | ARG666 |
A | PHE689 |
Functional Information from PROSITE/UniProt
site_id | PS00154 |
Number of Residues | 7 |
Details | ATPASE_E1_E2 E1-E2 ATPases phosphorylation site. DKTGTLT |
Chain | Residue | Details |
A | ASP351-THR357 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 662 |
Details | Topological domain: {"description":"Cytoplasmic","evidences":[{"evidenceCode":"ECO:0000305"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI2 |
Number of Residues | 20 |
Details | Transmembrane: {"description":"Helical; Name=1","evidences":[{"source":"UniProtKB","id":"P04191","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI3 |
Number of Residues | 108 |
Details | Topological domain: {"description":"Lumenal","evidences":[{"evidenceCode":"ECO:0000305"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI4 |
Number of Residues | 20 |
Details | Transmembrane: {"description":"Helical; Name=2","evidences":[{"source":"UniProtKB","id":"P04191","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI5 |
Number of Residues | 19 |
Details | Transmembrane: {"description":"Helical; Name=3","evidences":[{"source":"UniProtKB","id":"P04191","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI6 |
Number of Residues | 17 |
Details | Transmembrane: {"description":"Helical; Name=4","evidences":[{"source":"UniProtKB","id":"P04191","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI7 |
Number of Residues | 19 |
Details | Transmembrane: {"description":"Helical; Name=5","evidences":[{"source":"UniProtKB","id":"P04191","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI8 |
Number of Residues | 20 |
Details | Transmembrane: {"description":"Helical; Name=6","evidences":[{"source":"UniProtKB","id":"P04191","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI9 |
Number of Residues | 22 |
Details | Transmembrane: {"description":"Helical; Name=7","evidences":[{"source":"UniProtKB","id":"P04191","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI10 |
Number of Residues | 19 |
Details | Transmembrane: {"description":"Helical; Name=8","evidences":[{"source":"UniProtKB","id":"P04191","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI11 |
Number of Residues | 18 |
Details | Transmembrane: {"description":"Helical; Name=9","evidences":[{"source":"UniProtKB","id":"P04191","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI12 |
Number of Residues | 20 |
Details | Transmembrane: {"description":"Helical; Name=10","evidences":[{"source":"UniProtKB","id":"P04191","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI13 |
Number of Residues | 19 |
Details | Region: {"description":"Interaction with HAX1","evidences":[{"source":"PubMed","id":"18971376","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI14 |
Number of Residues | 31 |
Details | Region: {"description":"Interaction with PLN","evidences":[{"source":"UniProtKB","id":"P04191","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI15 |
Number of Residues | 1 |
Details | Active site: {"description":"4-aspartylphosphate intermediate","evidences":[{"source":"UniProtKB","id":"P04191","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI16 |
Number of Residues | 18 |
Details | Binding site: {"evidences":[{"source":"UniProtKB","id":"P11607","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI17 |
Number of Residues | 5 |
Details | Binding site: {"evidences":[{"source":"UniProtKB","id":"P04191","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI18 |
Number of Residues | 2 |
Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"O55143","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI19 |
Number of Residues | 2 |
Details | Modified residue: {"description":"3'-nitrotyrosine","evidences":[{"source":"PubMed","id":"16399855","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI20 |
Number of Residues | 1 |
Details | Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"UniProtKB","id":"Q64578","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI21 |
Number of Residues | 1 |
Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"24275569","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI22 |
Number of Residues | 1 |
Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"17081983","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"18691976","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"19690332","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"24275569","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |