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7AOL

Structure of SARS-CoV-2 Main Protease bound to Climbazole

Functional Information from GO Data
ChainGOidnamespacecontents
A0008233molecular_functionpeptidase activity
A0019082biological_processviral protein processing
Functional Information from PDB Data
site_idAC1
Number of Residues8
Detailsbinding site for residue DMS A 401
ChainResidue
AGLN74
ALEU75
AARG76
APHE223
ATHR224
AASP263
AHOH556
AHOH584

site_idAC2
Number of Residues4
Detailsbinding site for residue IMD A 402
ChainResidue
AGLN273
AASN274
AHOH583
APRO96

site_idAC3
Number of Residues16
Detailsbinding site for residue RQH A 403
ChainResidue
AVAL104
AARG105
AASP176
AGLU178
AASN228
ALEU232
APRO241
AHOH509
AHOH512
AHOH594
AHOH598
AHOH724
AHOH739
AHOH787
AHOH841
AHOH886

site_idAC4
Number of Residues4
Detailsbinding site for residue DMS A 404
ChainResidue
AGLY15
AMET17
ALYS97
AHOH600

site_idAC5
Number of Residues2
Detailsbinding site for residue DMS A 405
ChainResidue
ATYR101
AHOH659

site_idAC6
Number of Residues6
Detailsbinding site for residue DMS A 406
ChainResidue
AMET6
APHE8
ASER123
AGLN127
AARG298
AHOH678

site_idAC7
Number of Residues6
Detailsbinding site for residue DMS A 407
ChainResidue
APHE140
AASN142
AHIS163
AMET165
AGLU166
AHOH501

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues305
DetailsDomain: {"description":"Peptidase C30","evidences":[{"source":"PROSITE-ProRule","id":"PRU00772","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues1
DetailsActive site: {"description":"For 3CL-PRO activity","evidences":[{"source":"PROSITE-ProRule","id":"PRU00772","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"32198291","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues1
DetailsActive site: {"description":"Nucleophile; for 3CL-PRO activity","evidences":[{"source":"PROSITE-ProRule","id":"PRU00772","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"32198291","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues3
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"PubMed","id":"39223933","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

243083

PDB entries from 2025-10-15

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