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6ZVK

The Halastavi arva virus (HalV) intergenic region IRES promotes translation by the simplest possible initiation mechanism

This is a non-PDB format compatible entry.
Functional Information from GO Data
ChainGOidnamespacecontents
120002181biological_processcytoplasmic translation
120003723molecular_functionRNA binding
120003735molecular_functionstructural constituent of ribosome
120005737cellular_componentcytoplasm
120005840cellular_componentribosome
120006412biological_processtranslation
120022625cellular_componentcytosolic large ribosomal subunit
120022626cellular_componentcytosolic ribosome
120044391cellular_componentribosomal subunit
121990904cellular_componentribonucleoprotein complex
130003723molecular_functionRNA binding
220003735molecular_functionstructural constituent of ribosome
220005654cellular_componentnucleoplasm
220005730cellular_componentnucleolus
220005737cellular_componentcytoplasm
220005783cellular_componentendoplasmic reticulum
220005791cellular_componentrough endoplasmic reticulum
220005829cellular_componentcytosol
220005840cellular_componentribosome
220006364biological_processrRNA processing
220006412biological_processtranslation
220022625cellular_componentcytosolic large ribosomal subunit
220022626cellular_componentcytosolic ribosome
221990904cellular_componentribonucleoprotein complex
320003723molecular_functionRNA binding
320003735molecular_functionstructural constituent of ribosome
320005737cellular_componentcytoplasm
320005840cellular_componentribosome
320006412biological_processtranslation
320022625cellular_componentcytosolic large ribosomal subunit
321990904cellular_componentribonucleoprotein complex
420000470biological_processmaturation of LSU-rRNA
420003723molecular_functionRNA binding
420003735molecular_functionstructural constituent of ribosome
420005737cellular_componentcytoplasm
420005840cellular_componentribosome
420006412biological_processtranslation
420015934cellular_componentlarge ribosomal subunit
420022625cellular_componentcytosolic large ribosomal subunit
421990904cellular_componentribonucleoprotein complex
520003723molecular_functionRNA binding
520003735molecular_functionstructural constituent of ribosome
520005634cellular_componentnucleus
520005730cellular_componentnucleolus
520005737cellular_componentcytoplasm
520005840cellular_componentribosome
520006412biological_processtranslation
520022625cellular_componentcytosolic large ribosomal subunit
521990904cellular_componentribonucleoprotein complex
620003735molecular_functionstructural constituent of ribosome
620005737cellular_componentcytoplasm
620005840cellular_componentribosome
620006412biological_processtranslation
620022625cellular_componentcytosolic large ribosomal subunit
621990904cellular_componentribonucleoprotein complex
720003735molecular_functionstructural constituent of ribosome
720005737cellular_componentcytoplasm
720005783cellular_componentendoplasmic reticulum
720005829cellular_componentcytosol
720005840cellular_componentribosome
720006412biological_processtranslation
720022625cellular_componentcytosolic large ribosomal subunit
721990904cellular_componentribonucleoprotein complex
820003735molecular_functionstructural constituent of ribosome
820005840cellular_componentribosome
820006412biological_processtranslation
920002181biological_processcytoplasmic translation
920003723molecular_functionRNA binding
920003735molecular_functionstructural constituent of ribosome
920005737cellular_componentcytoplasm
920005840cellular_componentribosome
920006412biological_processtranslation
920019843molecular_functionrRNA binding
920022625cellular_componentcytosolic large ribosomal subunit
920022626cellular_componentcytosolic ribosome
921990904cellular_componentribonucleoprotein complex
A20000463biological_processmaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
A20003729molecular_functionmRNA binding
A20003735molecular_functionstructural constituent of ribosome
A20005737cellular_componentcytoplasm
A20005840cellular_componentribosome
A20006412biological_processtranslation
A20022625cellular_componentcytosolic large ribosomal subunit
A21990904cellular_componentribonucleoprotein complex
A30003723molecular_functionRNA binding
A30003735molecular_functionstructural constituent of ribosome
A30005840cellular_componentribosome
A30006412biological_processtranslation
A30015935cellular_componentsmall ribosomal subunit
B20002181biological_processcytoplasmic translation
B20003735molecular_functionstructural constituent of ribosome
B20005737cellular_componentcytoplasm
B20005829cellular_componentcytosol
B20005840cellular_componentribosome
B20006412biological_processtranslation
B20022625cellular_componentcytosolic large ribosomal subunit
B21990904cellular_componentribonucleoprotein complex
B30000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
B30003723molecular_functionRNA binding
B30003735molecular_functionstructural constituent of ribosome
B30005634cellular_componentnucleus
B30005730cellular_componentnucleolus
B30005737cellular_componentcytoplasm
B30005840cellular_componentribosome
B30006364biological_processrRNA processing
B30006412biological_processtranslation
B30022626cellular_componentcytosolic ribosome
B30022627cellular_componentcytosolic small ribosomal subunit
B30032040cellular_componentsmall-subunit processome
B30042274biological_processribosomal small subunit biogenesis
B30045202cellular_componentsynapse
B31990830biological_processcellular response to leukemia inhibitory factor
B31990904cellular_componentribonucleoprotein complex
C20003735molecular_functionstructural constituent of ribosome
C20005840cellular_componentribosome
C20006412biological_processtranslation
C30003735molecular_functionstructural constituent of ribosome
C30005634cellular_componentnucleus
C30005730cellular_componentnucleolus
C30005737cellular_componentcytoplasm
C30005829cellular_componentcytosol
C30005840cellular_componentribosome
C30006412biological_processtranslation
C30022626cellular_componentcytosolic ribosome
C31990904cellular_componentribonucleoprotein complex
D20003735molecular_functionstructural constituent of ribosome
D20005737cellular_componentcytoplasm
D20005840cellular_componentribosome
D20006412biological_processtranslation
D20022625cellular_componentcytosolic large ribosomal subunit
D21990904cellular_componentribonucleoprotein complex
D30000447biological_processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
D30000461biological_processendonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
D30003735molecular_functionstructural constituent of ribosome
D30005783cellular_componentendoplasmic reticulum
D30005791cellular_componentrough endoplasmic reticulum
D30005829cellular_componentcytosol
D30005840cellular_componentribosome
D30006412biological_processtranslation
D30022627cellular_componentcytosolic small ribosomal subunit
D31990904cellular_componentribonucleoprotein complex
E20003735molecular_functionstructural constituent of ribosome
E20005840cellular_componentribosome
E20006412biological_processtranslation
F20003735molecular_functionstructural constituent of ribosome
F20005840cellular_componentribosome
F20006412biological_processtranslation
F30003735molecular_functionstructural constituent of ribosome
F30005634cellular_componentnucleus
F30005730cellular_componentnucleolus
F30005737cellular_componentcytoplasm
F30005840cellular_componentribosome
F30006412biological_processtranslation
F30022626cellular_componentcytosolic ribosome
F30022627cellular_componentcytosolic small ribosomal subunit
F30070181molecular_functionsmall ribosomal subunit rRNA binding
F31990904cellular_componentribonucleoprotein complex
G20000027biological_processribosomal large subunit assembly
G20003735molecular_functionstructural constituent of ribosome
G20005634cellular_componentnucleus
G20005730cellular_componentnucleolus
G20005737cellular_componentcytoplasm
G20005840cellular_componentribosome
G20006412biological_processtranslation
G20008097molecular_function5S rRNA binding
G20019843molecular_functionrRNA binding
G20022625cellular_componentcytosolic large ribosomal subunit
G21990904cellular_componentribonucleoprotein complex
G30003735molecular_functionstructural constituent of ribosome
G30005634cellular_componentnucleus
G30005730cellular_componentnucleolus
G30005737cellular_componentcytoplasm
G30005840cellular_componentribosome
G30006412biological_processtranslation
G30019843molecular_functionrRNA binding
G30022626cellular_componentcytosolic ribosome
G30022627cellular_componentcytosolic small ribosomal subunit
G31990904cellular_componentribonucleoprotein complex
G50003676molecular_functionnucleic acid binding
G50003723molecular_functionRNA binding
G50003735molecular_functionstructural constituent of ribosome
G50005737cellular_componentcytoplasm
G50005829cellular_componentcytosol
G50005840cellular_componentribosome
G50006412biological_processtranslation
G50015935cellular_componentsmall ribosomal subunit
G50019843molecular_functionrRNA binding
G50022626cellular_componentcytosolic ribosome
G51990904cellular_componentribonucleoprotein complex
H20003735molecular_functionstructural constituent of ribosome
H20005840cellular_componentribosome
H20006412biological_processtranslation
H20015934cellular_componentlarge ribosomal subunit
H30003735molecular_functionstructural constituent of ribosome
H30005737cellular_componentcytoplasm
H30005783cellular_componentendoplasmic reticulum
H30005791cellular_componentrough endoplasmic reticulum
H30005829cellular_componentcytosol
H30005840cellular_componentribosome
H30006412biological_processtranslation
H30008270molecular_functionzinc ion binding
H30022626cellular_componentcytosolic ribosome
H30022627cellular_componentcytosolic small ribosomal subunit
H30046872molecular_functionmetal ion binding
H31990904cellular_componentribonucleoprotein complex
H50000028biological_processribosomal small subunit assembly
H50003723molecular_functionRNA binding
H50003735molecular_functionstructural constituent of ribosome
H50005634cellular_componentnucleus
H50005730cellular_componentnucleolus
H50005737cellular_componentcytoplasm
H50005840cellular_componentribosome
H50006412biological_processtranslation
H50022626cellular_componentcytosolic ribosome
H50022627cellular_componentcytosolic small ribosomal subunit
H51990904cellular_componentribonucleoprotein complex
I20003735molecular_functionstructural constituent of ribosome
I20005737cellular_componentcytoplasm
I20005840cellular_componentribosome
I20006412biological_processtranslation
I20022625cellular_componentcytosolic large ribosomal subunit
I20046872molecular_functionmetal ion binding
I21990904cellular_componentribonucleoprotein complex
I30003723molecular_functionRNA binding
I30003735molecular_functionstructural constituent of ribosome
I30005840cellular_componentribosome
I30006412biological_processtranslation
I30015935cellular_componentsmall ribosomal subunit
I50003735molecular_functionstructural constituent of ribosome
I50005840cellular_componentribosome
I50006412biological_processtranslation
I50044391cellular_componentribosomal subunit
I51990904cellular_componentribonucleoprotein complex
J20003735molecular_functionstructural constituent of ribosome
J20005737cellular_componentcytoplasm
J20005840cellular_componentribosome
J20006412biological_processtranslation
J20022625cellular_componentcytosolic large ribosomal subunit
J21990904cellular_componentribonucleoprotein complex
J50003735molecular_functionstructural constituent of ribosome
J50005634cellular_componentnucleus
J50005730cellular_componentnucleolus
J50005737cellular_componentcytoplasm
J50005840cellular_componentribosome
J50006412biological_processtranslation
J50022626cellular_componentcytosolic ribosome
J50022627cellular_componentcytosolic small ribosomal subunit
J51990904cellular_componentribonucleoprotein complex
L20003735molecular_functionstructural constituent of ribosome
L20005840cellular_componentribosome
L20006412biological_processtranslation
L30000028biological_processribosomal small subunit assembly
L30003723molecular_functionRNA binding
L30003735molecular_functionstructural constituent of ribosome
L30005634cellular_componentnucleus
L30005730cellular_componentnucleolus
L30005737cellular_componentcytoplasm
L30005829cellular_componentcytosol
L30005840cellular_componentribosome
L30006412biological_processtranslation
L30022626cellular_componentcytosolic ribosome
L30022627cellular_componentcytosolic small ribosomal subunit
L30046872molecular_functionmetal ion binding
L31990904cellular_componentribonucleoprotein complex
M20003723molecular_functionRNA binding
M20003735molecular_functionstructural constituent of ribosome
M20005737cellular_componentcytoplasm
M20005840cellular_componentribosome
M20006412biological_processtranslation
M20022625cellular_componentcytosolic large ribosomal subunit
M20070180molecular_functionlarge ribosomal subunit rRNA binding
M21990904cellular_componentribonucleoprotein complex
N30003723molecular_functionRNA binding
N30003735molecular_functionstructural constituent of ribosome
N30006412biological_processtranslation
N30015935cellular_componentsmall ribosomal subunit
O30003735molecular_functionstructural constituent of ribosome
O30005840cellular_componentribosome
O30006412biological_processtranslation
P30003735molecular_functionstructural constituent of ribosome
P30005634cellular_componentnucleus
P30005737cellular_componentcytoplasm
P30005813cellular_componentcentrosome
P30005840cellular_componentribosome
P30005856cellular_componentcytoskeleton
P30006364biological_processrRNA processing
P30006412biological_processtranslation
P30022627cellular_componentcytosolic small ribosomal subunit
P30032040cellular_componentsmall-subunit processome
P30042274biological_processribosomal small subunit biogenesis
P31990904cellular_componentribonucleoprotein complex
Q30003735molecular_functionstructural constituent of ribosome
Q30005840cellular_componentribosome
Q30006412biological_processtranslation
R20003735molecular_functionstructural constituent of ribosome
R20005840cellular_componentribosome
R20006412biological_processtranslation
S20002181biological_processcytoplasmic translation
S20003723molecular_functionRNA binding
S20003735molecular_functionstructural constituent of ribosome
S20005515molecular_functionprotein binding
S20005634cellular_componentnucleus
S20005730cellular_componentnucleolus
S20005737cellular_componentcytoplasm
S20005783cellular_componentendoplasmic reticulum
S20005791cellular_componentrough endoplasmic reticulum
S20005829cellular_componentcytosol
S20005840cellular_componentribosome
S20005925cellular_componentfocal adhesion
S20006412biological_processtranslation
S20016020cellular_componentmembrane
S20022625cellular_componentcytosolic large ribosomal subunit
S20022626cellular_componentcytosolic ribosome
S20043232cellular_componentintracellular non-membrane-bounded organelle
S21990904cellular_componentribonucleoprotein complex
T20003735molecular_functionstructural constituent of ribosome
T20005840cellular_componentribosome
T20006412biological_processtranslation
T30003735molecular_functionstructural constituent of ribosome
T30005634cellular_componentnucleus
T30005730cellular_componentnucleolus
T30005737cellular_componentcytoplasm
T30005783cellular_componentendoplasmic reticulum
T30005791cellular_componentrough endoplasmic reticulum
T30005829cellular_componentcytosol
T30005840cellular_componentribosome
T30006412biological_processtranslation
T30015935cellular_componentsmall ribosomal subunit
T30022626cellular_componentcytosolic ribosome
T30022627cellular_componentcytosolic small ribosomal subunit
T31990904cellular_componentribonucleoprotein complex
U20000463biological_processmaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
U20003723molecular_functionRNA binding
U20003735molecular_functionstructural constituent of ribosome
U20005737cellular_componentcytoplasm
U20005840cellular_componentribosome
U20022625cellular_componentcytosolic large ribosomal subunit
U21990904cellular_componentribonucleoprotein complex
U30003735molecular_functionstructural constituent of ribosome
U30005840cellular_componentribosome
U30006412biological_processtranslation
U30015935cellular_componentsmall ribosomal subunit
V20000470biological_processmaturation of LSU-rRNA
V20002181biological_processcytoplasmic translation
V20003723molecular_functionRNA binding
V20003735molecular_functionstructural constituent of ribosome
V20005515molecular_functionprotein binding
V20005634cellular_componentnucleus
V20005730cellular_componentnucleolus
V20005737cellular_componentcytoplasm
V20005829cellular_componentcytosol
V20005840cellular_componentribosome
V20005925cellular_componentfocal adhesion
V20006412biological_processtranslation
V20016020cellular_componentmembrane
V20022625cellular_componentcytosolic large ribosomal subunit
V20022626cellular_componentcytosolic ribosome
V20042254biological_processribosome biogenesis
V20045202cellular_componentsynapse
V20045296molecular_functioncadherin binding
V21990904cellular_componentribonucleoprotein complex
V30003735molecular_functionstructural constituent of ribosome
V30005840cellular_componentribosome
V30006412biological_processtranslation
W20002181biological_processcytoplasmic translation
W20003735molecular_functionstructural constituent of ribosome
W20005737cellular_componentcytoplasm
W20005840cellular_componentribosome
W20006412biological_processtranslation
W20019843molecular_functionrRNA binding
W20022625cellular_componentcytosolic large ribosomal subunit
W21990904cellular_componentribonucleoprotein complex
W30003723molecular_functionRNA binding
W30003735molecular_functionstructural constituent of ribosome
W30005840cellular_componentribosome
W30006412biological_processtranslation
W30015935cellular_componentsmall ribosomal subunit
X20003735molecular_functionstructural constituent of ribosome
X20005840cellular_componentribosome
X20006412biological_processtranslation
X30003735molecular_functionstructural constituent of ribosome
X30005737cellular_componentcytoplasm
X30005840cellular_componentribosome
X30006412biological_processtranslation
X31990904cellular_componentribonucleoprotein complex
Y20003723molecular_functionRNA binding
Y20003735molecular_functionstructural constituent of ribosome
Y20005634cellular_componentnucleus
Y20005730cellular_componentnucleolus
Y20005737cellular_componentcytoplasm
Y20005840cellular_componentribosome
Y20006412biological_processtranslation
Y20019843molecular_functionrRNA binding
Y20022625cellular_componentcytosolic large ribosomal subunit
Y21990904cellular_componentribonucleoprotein complex
Y30003677molecular_functionDNA binding
Y30003723molecular_functionRNA binding
Y30003735molecular_functionstructural constituent of ribosome
Y30003906molecular_functionDNA-(apurinic or apyrimidinic site) endonuclease activity
Y30005634cellular_componentnucleus
Y30005730cellular_componentnucleolus
Y30005737cellular_componentcytoplasm
Y30005739cellular_componentmitochondrion
Y30005743cellular_componentmitochondrial inner membrane
Y30005819cellular_componentspindle
Y30005840cellular_componentribosome
Y30005856cellular_componentcytoskeleton
Y30006281biological_processDNA repair
Y30006412biological_processtranslation
Y30006417biological_processregulation of translation
Y30006915biological_processapoptotic process
Y30015935cellular_componentsmall ribosomal subunit
Y30016829molecular_functionlyase activity
Y30022626cellular_componentcytosolic ribosome
Y30022627cellular_componentcytosolic small ribosomal subunit
Y30031334biological_processpositive regulation of protein-containing complex assembly
Y30045202cellular_componentsynapse
Y30051092biological_processpositive regulation of NF-kappaB transcription factor activity
Y30051301biological_processcell division
Y30140078molecular_functionclass I DNA-(apurinic or apyrimidinic site) endonuclease activity
Y31990904cellular_componentribonucleoprotein complex
Y32001235biological_processpositive regulation of apoptotic signaling pathway
Z20003723molecular_functionRNA binding
Z20003735molecular_functionstructural constituent of ribosome
Z20005840cellular_componentribosome
Z20006412biological_processtranslation
a30001891cellular_componentphagocytic cup
a30001934biological_processpositive regulation of protein phosphorylation
a30005080molecular_functionprotein kinase C binding
a30005634cellular_componentnucleus
a30005737cellular_componentcytoplasm
a30005829cellular_componentcytosol
a30005840cellular_componentribosome
a30005886cellular_componentplasma membrane
a30006417biological_processregulation of translation
a30006915biological_processapoptotic process
a30007369biological_processgastrulation
a30030425cellular_componentdendrite
a30042995cellular_componentcell projection
a30043022molecular_functionribosome binding
a30043204cellular_componentperikaryon
a30045182molecular_functiontranslation regulator activity
a30048471cellular_componentperinuclear region of cytoplasm
a30048511biological_processrhythmic process
a30072344biological_processrescue of stalled ribosome
a31990904cellular_componentribonucleoprotein complex
a50000028biological_processribosomal small subunit assembly
a50003735molecular_functionstructural constituent of ribosome
a50005634cellular_componentnucleus
a50005730cellular_componentnucleolus
a50005737cellular_componentcytoplasm
a50005840cellular_componentribosome
a50006412biological_processtranslation
a50015935cellular_componentsmall ribosomal subunit
a50022627cellular_componentcytosolic small ribosomal subunit
a51990904cellular_componentribonucleoprotein complex
a70003735molecular_functionstructural constituent of ribosome
a70005840cellular_componentribosome
a70006412biological_processtranslation
b30000082biological_processG1/S transition of mitotic cell cycle
b30000278biological_processmitotic cell cycle
b30001890biological_processplacenta development
b30002181biological_processcytoplasmic translation
b30002309biological_processT cell proliferation involved in immune response
b30003735molecular_functionstructural constituent of ribosome
b30005634cellular_componentnucleus
b30005730cellular_componentnucleolus
b30005737cellular_componentcytoplasm
b30005783cellular_componentendoplasmic reticulum
b30005829cellular_componentcytosol
b30005840cellular_componentribosome
b30006364biological_processrRNA processing
b30006412biological_processtranslation
b30006924biological_processactivation-induced cell death of T cells
b30007369biological_processgastrulation
b30008284biological_processpositive regulation of cell population proliferation
b30015935cellular_componentsmall ribosomal subunit
b30019901molecular_functionprotein kinase binding
b30022605biological_processmammalian oogenesis stage
b30022626cellular_componentcytosolic ribosome
b30022627cellular_componentcytosolic small ribosomal subunit
b30030425cellular_componentdendrite
b30031929biological_processTOR signaling
b30032040cellular_componentsmall-subunit processome
b30033077biological_processT cell differentiation in thymus
b30036464cellular_componentcytoplasmic ribonucleoprotein granule
b30042274biological_processribosomal small subunit biogenesis
b30042593biological_processglucose homeostasis
b30043065biological_processpositive regulation of apoptotic process
b30043066biological_processnegative regulation of apoptotic process
b30044297cellular_componentcell body
b30048471cellular_componentperinuclear region of cytoplasm
b30048821biological_processerythrocyte development
b31990904cellular_componentribonucleoprotein complex
c30000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
c30003735molecular_functionstructural constituent of ribosome
c30005634cellular_componentnucleus
c30005730cellular_componentnucleolus
c30005737cellular_componentcytoplasm
c30005840cellular_componentribosome
c30006412biological_processtranslation
c30016020cellular_componentmembrane
c30022626cellular_componentcytosolic ribosome
c30022627cellular_componentcytosolic small ribosomal subunit
c31990904cellular_componentribonucleoprotein complex
d30003723molecular_functionRNA binding
d30003735molecular_functionstructural constituent of ribosome
d30005634cellular_componentnucleus
d30005730cellular_componentnucleolus
d30005737cellular_componentcytoplasm
d30005840cellular_componentribosome
d30006412biological_processtranslation
d30015935cellular_componentsmall ribosomal subunit
d30019843molecular_functionrRNA binding
d30022626cellular_componentcytosolic ribosome
d30022627cellular_componentcytosolic small ribosomal subunit
d30042274biological_processribosomal small subunit biogenesis
d30043226cellular_componentorganelle
d31990904cellular_componentribonucleoprotein complex
e30003735molecular_functionstructural constituent of ribosome
e30005634cellular_componentnucleus
e30005730cellular_componentnucleolus
e30005737cellular_componentcytoplasm
e30005794cellular_componentGolgi apparatus
e30005829cellular_componentcytosol
e30005840cellular_componentribosome
e30006412biological_processtranslation
e30022626cellular_componentcytosolic ribosome
e30022627cellular_componentcytosolic small ribosomal subunit
e30032040cellular_componentsmall-subunit processome
e30042274biological_processribosomal small subunit biogenesis
e30043231cellular_componentintracellular membrane-bounded organelle
e30090263biological_processpositive regulation of canonical Wnt signaling pathway
e31990904cellular_componentribonucleoprotein complex
f30000028biological_processribosomal small subunit assembly
f30002181biological_processcytoplasmic translation
f30003735molecular_functionstructural constituent of ribosome
f30005634cellular_componentnucleus
f30005730cellular_componentnucleolus
f30005737cellular_componentcytoplasm
f30005783cellular_componentendoplasmic reticulum
f30005791cellular_componentrough endoplasmic reticulum
f30005829cellular_componentcytosol
f30005840cellular_componentribosome
f30006364biological_processrRNA processing
f30006412biological_processtranslation
f30022626cellular_componentcytosolic ribosome
f30022627cellular_componentcytosolic small ribosomal subunit
f30030490biological_processmaturation of SSU-rRNA
f30032040cellular_componentsmall-subunit processome
f30042254biological_processribosome biogenesis
f30042274biological_processribosomal small subunit biogenesis
f30045202cellular_componentsynapse
f31990904cellular_componentribonucleoprotein complex
j30003723molecular_functionRNA binding
j30003735molecular_functionstructural constituent of ribosome
j30005634cellular_componentnucleus
j30005730cellular_componentnucleolus
j30005737cellular_componentcytoplasm
j30005840cellular_componentribosome
j30006412biological_processtranslation
j30019843molecular_functionrRNA binding
j30022626cellular_componentcytosolic ribosome
j30022627cellular_componentcytosolic small ribosomal subunit
j31990904cellular_componentribonucleoprotein complex
k20000122biological_processnegative regulation of transcription by RNA polymerase II
k20001223molecular_functiontranscription coactivator binding
k20003735molecular_functionstructural constituent of ribosome
k20005654cellular_componentnucleoplasm
k20005730cellular_componentnucleolus
k20005737cellular_componentcytoplasm
k20005840cellular_componentribosome
k20006412biological_processtranslation
k20008284biological_processpositive regulation of cell population proliferation
k20010628biological_processpositive regulation of gene expression
k20022625cellular_componentcytosolic large ribosomal subunit
k20022626cellular_componentcytosolic ribosome
k20031625molecular_functionubiquitin protein ligase binding
k20032986biological_processprotein-DNA complex disassembly
k20032991cellular_componentprotein-containing complex
k20045202cellular_componentsynapse
k20050821biological_processprotein stabilization
k20070180molecular_functionlarge ribosomal subunit rRNA binding
k20070314biological_processG1 to G0 transition
k20072717biological_processcellular response to actinomycin D
k21901798biological_processpositive regulation of signal transduction by p53 class mediator
k21903450biological_processregulation of G1 to G0 transition
k21904667biological_processnegative regulation of ubiquitin protein ligase activity
k21990904cellular_componentribonucleoprotein complex
k21990948molecular_functionubiquitin ligase inhibitor activity
k22000059biological_processnegative regulation of ubiquitin-dependent protein catabolic process
m20003735molecular_functionstructural constituent of ribosome
m20005840cellular_componentribosome
m20006412biological_processtranslation
m20019843molecular_functionrRNA binding
o20002181biological_processcytoplasmic translation
o20003723molecular_functionRNA binding
o20003735molecular_functionstructural constituent of ribosome
o20005654cellular_componentnucleoplasm
o20005730cellular_componentnucleolus
o20005737cellular_componentcytoplasm
o20005840cellular_componentribosome
o20006364biological_processrRNA processing
o20006412biological_processtranslation
o20006977biological_processDNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
o20015934cellular_componentlarge ribosomal subunit
o20022625cellular_componentcytosolic large ribosomal subunit
o20022626cellular_componentcytosolic ribosome
o20034644biological_processcellular response to UV
o20042273biological_processribosomal large subunit biogenesis
o20045202cellular_componentsynapse
o20045727biological_processpositive regulation of translation
o20048027molecular_functionmRNA 5'-UTR binding
o20071479biological_processcellular response to ionizing radiation
o20071480biological_processcellular response to gamma radiation
o21902164biological_processpositive regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator
o21902167biological_processpositive regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
o21904803biological_processregulation of translation involved in cellular response to UV
o21990904cellular_componentribonucleoprotein complex
p20003735molecular_functionstructural constituent of ribosome
p20005737cellular_componentcytoplasm
p20005840cellular_componentribosome
p20006412biological_processtranslation
p20022618biological_processprotein-RNA complex assembly
p20022625cellular_componentcytosolic large ribosomal subunit
p21990904cellular_componentribonucleoprotein complex
q20003735molecular_functionstructural constituent of ribosome
q20005737cellular_componentcytoplasm
q20005840cellular_componentribosome
q20006412biological_processtranslation
q20015934cellular_componentlarge ribosomal subunit
q20022625cellular_componentcytosolic large ribosomal subunit
q20043232cellular_componentintracellular non-membrane-bounded organelle
q21990904cellular_componentribonucleoprotein complex
r20003735molecular_functionstructural constituent of ribosome
r20005840cellular_componentribosome
r20006412biological_processtranslation
s30003735molecular_functionstructural constituent of ribosome
s30005840cellular_componentribosome
s30006412biological_processtranslation
t20003735molecular_functionstructural constituent of ribosome
t20005840cellular_componentribosome
t20006412biological_processtranslation
u20003735molecular_functionstructural constituent of ribosome
u20005840cellular_componentribosome
u20006412biological_processtranslation
v20003735molecular_functionstructural constituent of ribosome
v20005737cellular_componentcytoplasm
v20005840cellular_componentribosome
v20006412biological_processtranslation
v20022625cellular_componentcytosolic large ribosomal subunit
v21990904cellular_componentribonucleoprotein complex
w20003729molecular_functionmRNA binding
w20003735molecular_functionstructural constituent of ribosome
w20005840cellular_componentribosome
w20006412biological_processtranslation
w20006417biological_processregulation of translation
w20015934cellular_componentlarge ribosomal subunit
w20017148biological_processnegative regulation of translation
w20022625cellular_componentcytosolic large ribosomal subunit
w21990904cellular_componentribonucleoprotein complex
x20000049molecular_functiontRNA binding
x20002181biological_processcytoplasmic translation
x20003735molecular_functionstructural constituent of ribosome
x20005737cellular_componentcytoplasm
x20005840cellular_componentribosome
x20006412biological_processtranslation
x20022625cellular_componentcytosolic large ribosomal subunit
x20042273biological_processribosomal large subunit biogenesis
x21990904cellular_componentribonucleoprotein complex
y20003735molecular_functionstructural constituent of ribosome
y20005737cellular_componentcytoplasm
y20005783cellular_componentendoplasmic reticulum
y20005829cellular_componentcytosol
y20005840cellular_componentribosome
y20006412biological_processtranslation
y20022625cellular_componentcytosolic large ribosomal subunit
y21990904cellular_componentribonucleoprotein complex
Functional Information from PROSITE/UniProt
site_idPS00049
Number of Residues27
DetailsRIBOSOMAL_L14 Ribosomal protein L14 signature. AVVIrqrksyrrk.DGvflyFedNagVI
ChainResidueDetails
k2ALA79-ILE105

site_idPS00050
Number of Residues16
DetailsRIBOSOMAL_L23 Ribosomal protein L23 signature. KKAYVRLApdydaldV
ChainResidueDetails
m2LYS134-VAL149

site_idPS00051
Number of Residues17
DetailsRIBOSOMAL_L39E Ribosomal protein L39e signature. KTgnkIryNskrRHWRR
ChainResidueDetails
D2LYS30-ARG46

site_idPS00052
Number of Residues27
DetailsRIBOSOMAL_S7 Ribosomal protein S7 signature. ErLtnsMMmhgrnnGKKlmtvrIVkhA
ChainResidueDetails
N3GLU70-ALA96

site_idPS00053
Number of Residues18
DetailsRIBOSOMAL_S8 Ribosomal protein S8 signature. GfiVLTTSaGIMdheeAR
ChainResidueDetails
J5GLY100-ARG117

site_idPS00054
Number of Residues23
DetailsRIBOSOMAL_S11 Ribosomal protein S11 signature. LrALarS.GMkIgrieDvTPiPSD
ChainResidueDetails
a5LEU116-ASP138

site_idPS00055
Number of Residues8
DetailsRIBOSOMAL_S12 Ribosomal protein S12 signature. KqPNSAiR
ChainResidueDetails
T3LYS60-ARG67

site_idPS00056
Number of Residues13
DetailsRIBOSOMAL_S17 Ribosomal protein S17 signature. GDiVtVgEcRPLS
ChainResidueDetails
G3GLY123-SER135

site_idPS00323
Number of Residues25
DetailsRIBOSOMAL_S19 Ribosomal protein S19 signature. NGKtfnqveIkpemIGhyLGEFsiT
ChainResidueDetails
A3ASN98-THR122

site_idPS00358
Number of Residues17
DetailsRIBOSOMAL_L5 Ribosomal protein L5 signature. LeqLTGQtpVfSkARyT
ChainResidueDetails
Y2LEU40-THR56

site_idPS00359
Number of Residues16
DetailsRIBOSOMAL_L11 Ribosomal protein L11 signature. KeIlGTaqSVGcNVdG
ChainResidueDetails
M2LYS130-GLY145

site_idPS00360
Number of Residues19
DetailsRIBOSOMAL_S9 Ribosomal protein S9 signature. GGGhvAQiyAirqSiSKAL
ChainResidueDetails
B3GLY100-LEU118

site_idPS00361
Number of Residues16
DetailsRIBOSOMAL_S10 Ribosomal protein S10 signature. AkekNLkvkGPVrMPT
ChainResidueDetails
I3ALA43-THR58

site_idPS00362
Number of Residues31
DetailsRIBOSOMAL_S15 Ribosomal protein S15 signature. VrkHLernRkDkdAkfrLilIesrihrLarY
ChainResidueDetails
F3VAL148-TYR178

site_idPS00464
Number of Residues25
DetailsRIBOSOMAL_L22 Ribosomal protein L22 signature. RrrTyRAhGRinpymsspCHIEMiL
ChainResidueDetails
H2ARG126-LEU150

site_idPS00467
Number of Residues12
DetailsRIBOSOMAL_L2 Ribosomal protein L2 signature. PrvRGVAmNPvE
ChainResidueDetails
92PRO197-GLU208

site_idPS00474
Number of Residues24
DetailsRIBOSOMAL_L3 Ribosomal protein L3 signature. FgqdemiDviGvTkGKGykGvtsR
ChainResidueDetails
52PHE211-ARG234

site_idPS00475
Number of Residues32
DetailsRIBOSOMAL_L15 Ribosomal protein L15 signature. KVLGkGkLpkqp.ViVkakfFSrrAeekIkgvG
ChainResidueDetails
q2LYS110-GLY141

site_idPS00526
Number of Residues20
DetailsRIBOSOMAL_L19E Ribosomal protein L19e signature. QKRLaSsvlrCGkkkVWLDP
ChainResidueDetails
32GLN7-PRO26

site_idPS00527
Number of Residues23
DetailsRIBOSOMAL_S14 Ribosomal protein S14 signature. RvCsnrhglirkyg.LNMCRqCFR
ChainResidueDetails
H3ARG22-ARG44

site_idPS00528
Number of Residues15
DetailsRIBOSOMAL_S4E Ribosomal protein S4e signature. HlKRVAaPkhWmLdK
ChainResidueDetails
j3HIS8-LYS22

site_idPS00529
Number of Residues23
DetailsRIBOSOMAL_S24E Ribosomal protein S24e signature. FGggKTtGFGmIYDSldyakknE
ChainResidueDetails
I5PHE64-GLU86

site_idPS00548
Number of Residues37
DetailsRIBOSOMAL_S3 Ribosomal protein S3 signature. AKsmkfvdGlMihSgdpVnyyVDtavrhvlLrqGvlG
ChainResidueDetails
Y3ALA147-GLY183

site_idPS00578
Number of Residues12
DetailsRIBOSOMAL_S6E Ribosomal protein S6e signature. ISGGnDkqGfPM
ChainResidueDetails
b3ILE52-MET63

site_idPS00579
Number of Residues15
DetailsRIBOSOMAL_L29 Ribosomal protein L29 signature. KLSKIRvVRKSIARV
ChainResidueDetails
A2LYS43-VAL57

site_idPS00580
Number of Residues21
DetailsRIBOSOMAL_L32E Ribosomal protein L32e signature. FiRhqsdRyvKIkrn..WRKprG
ChainResidueDetails
v2PHE20-GLY40

site_idPS00585
Number of Residues33
DetailsRIBOSOMAL_S5 Ribosomal protein S5 signature. GQrtrFkAfvAIGDyn.GhVGlGvkcsk.EVat.AI
ChainResidueDetails
W3GLY119-ILE151

site_idPS00628
Number of Residues20
DetailsRIBOSOMAL_S19E Ribosomal protein S19e signature. PshfsrgSksVaRrVLQaLE
ChainResidueDetails
H5PRO89-GLU108

site_idPS00632
Number of Residues25
DetailsRIBOSOMAL_S4 Ribosomal protein S4 signature. LErRLqtqVFKlglAkSihhARvLI
ChainResidueDetails
d3LEU106-ILE130

site_idPS00634
Number of Residues33
DetailsRIBOSOMAL_L30 Ribosomal protein L30 signature. VLqlLrLrQifNgTfvklnkasinMLriVepYI
ChainResidueDetails
U2VAL107-ILE139

site_idPS00646
Number of Residues14
DetailsRIBOSOMAL_S13_1 Ribosomal protein S13 signature. RGlRHfwGlrVRGQ
ChainResidueDetails
G5ARG121-GLN134

site_idPS00678
Number of Residues15
DetailsWD_REPEATS_1 Trp-Asp (WD) repeats signature. ALSGswDgTLRLWDL
ChainResidueDetails
a3ALA78-LEU92
a3ILE120-THR134
a3ILE165-LEU179
a3CYS207-LEU221

site_idPS00687
Number of Residues8
DetailsALDEHYDE_DEHYDR_GLU Aldehyde dehydrogenases glutamic acid active site. GESSGKNV
ChainResidueDetails
t2GLY15-VAL22

site_idPS00700
Number of Residues22
DetailsRIBOSOMAL_L6_2 Ribosomal protein L6 signature 2. QattVknKdiRkFlDGIYVseK
ChainResidueDetails
W2GLN174-LYS195

site_idPS00709
Number of Residues25
DetailsRIBOSOMAL_L30E_1 Ribosomal protein L30e signature 1. SgkyvlGyKqsLKmiRqGkaKlVIL
ChainResidueDetails
13SER24-LEU48

site_idPS00712
Number of Residues16
DetailsRIBOSOMAL_S17E Ribosomal protein S17e signature. IpSKkLRNkIAGYvTH
ChainResidueDetails
C3ILE41-HIS56

site_idPS00733
Number of Residues8
DetailsRIBOSOMAL_S26E Ribosomal protein S26e signature. YCVSCAIH
ChainResidueDetails
O3TYR73-HIS80

site_idPS00783
Number of Residues24
DetailsRIBOSOMAL_L13 Ribosomal protein L13 signature. VRGMLPhktkrGQaaldrLkVFdG
ChainResidueDetails
w2VAL84-GLY107

site_idPS00939
Number of Residues27
DetailsRIBOSOMAL_L1E Ribosomal protein L1e signature. NttqKryAIcSALaASAlpalvmsKGH
ChainResidueDetails
t2ASN116-HIS142

site_idPS00948
Number of Residues14
DetailsRIBOSOMAL_S7E Ribosomal protein S7e signature. RLvRELEKKFSgKH
ChainResidueDetails
P3ARG316-HIS329

site_idPS00961
Number of Residues9
DetailsRIBOSOMAL_S28E Ribosomal protein S28e signature. ESEREARrL
ChainResidueDetails
f3GLU60-LEU68

site_idPS00962
Number of Residues12
DetailsRIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. VlKFLAAGTHLG
ChainResidueDetails
U3VAL15-GLY26

site_idPS00963
Number of Residues25
DetailsRIBOSOMAL_S2_2 Ribosomal protein S2 signature 2. PrlLVVtDpraDhqpLtEasyvNLP
ChainResidueDetails
U3PRO119-PRO143

site_idPS00993
Number of Residues21
DetailsRIBOSOMAL_L30E_2 Ribosomal protein L30e signature 2. ELGTacGKyyrvctLsIiDpG
ChainResidueDetails
13GLU80-GLY100

site_idPS00996
Number of Residues9
DetailsRIBOSOMAL_S21E Ribosomal protein S21e signature. LYVPRKCSA
ChainResidueDetails
D3LEU11-ALA19

site_idPS01073
Number of Residues18
DetailsRIBOSOMAL_L24E Ribosomal protein L24e signature. FsGykIyPGhGrrYaRtD
ChainResidueDetails
l2PHE8-ASP25

site_idPS01077
Number of Residues20
DetailsRIBOSOMAL_L37E Ribosomal protein L37e signature. GTsSfGkRrnkt.HtlCrRCG
ChainResidueDetails
C2GLY4-GLY23

site_idPS01082
Number of Residues18
DetailsRIBOSOMAL_L7AE Ribosomal protein L7Ae signature. CrkmgVPYciIkGKarLG
ChainResidueDetails
V2CYS174-GLY191

site_idPS01104
Number of Residues15
DetailsRIBOSOMAL_L13E Ribosomal protein L13e signature. RaGRGFSLeELrvaG
ChainResidueDetails
a7ARG71-GLY85

site_idPS01105
Number of Residues22
DetailsRIBOSOMAL_L35AE Ribosomal protein L35Ae signature. GKVtRaHGnsGmVrAkFrsnLP
ChainResidueDetails
x2GLY72-PRO93

site_idPS01106
Number of Residues18
DetailsRIBOSOMAL_L18E Ribosomal protein L18e signature. KrLfmSRtnRPpLSLsRM
ChainResidueDetails
S2LYS49-MET66

site_idPS01107
Number of Residues12
DetailsRIBOSOMAL_L27E Ribosomal protein L27e signature. GKNkWFFqkLRF
ChainResidueDetails
22GLY125-PHE136

site_idPS01108
Number of Residues19
DetailsRIBOSOMAL_L24 Ribosomal protein L24 signature. DDeVqVVrGhyKGqqiGkV
ChainResidueDetails
o2ASP52-VAL70

site_idPS01144
Number of Residues15
DetailsRIBOSOMAL_L31E Ribosomal protein L31e signature. VRIDtrLNkAvWaKG
ChainResidueDetails
u2VAL62-GLY76

site_idPS01145
Number of Residues14
DetailsRIBOSOMAL_L34E Ribosomal protein L34e signature. TaSnKtrlsRTPGN
ChainResidueDetails
y2THR15-ASN28

site_idPS01168
Number of Residues33
DetailsRIBOSOMAL_S27E Ribosomal protein S27e signature. KCpgCykittvFShAqtvvlCvgCStvLcqPtG
ChainResidueDetails
L3LYS36-GLY68

site_idPS01170
Number of Residues19
DetailsRIBOSOMAL_L6E Ribosomal protein L6e signature. NrvPLRRthqkFVIATSt.K
ChainResidueDetails
T2ASN185-LYS203

site_idPS01171
Number of Residues26
DetailsRIBOSOMAL_L21E Ribosomal protein L21e signature. GDiVdikgmgtvqk.GmpHkcYhGkTG
ChainResidueDetails
72GLY37-GLY62

site_idPS01172
Number of Residues12
DetailsRIBOSOMAL_L44E Ribosomal protein L44e signature. KtTKKivLRleC
ChainResidueDetails
F2LYS61-CYS72

site_idPS01189
Number of Residues19
DetailsRIBOSOMAL_S12E Ribosomal protein S12e signature. ALQevLktAlihDGLarGI
ChainResidueDetails
e3ALA17-ILE35

site_idPS01190
Number of Residues11
DetailsRIBOSOMAL_L36E Ribosomal protein L36e signature. PYERRaMELLK
ChainResidueDetails
B2PRO52-LYS62

site_idPS01191
Number of Residues13
DetailsRIBOSOMAL_S3AE Ribosomal protein S3Ae signature. LkGRVfEvSLaDL
ChainResidueDetails
V3LEU62-LEU74

site_idPS01193
Number of Residues20
DetailsRIBOSOMAL_S8E Ribosomal protein S8e signature. RrkTGGkrkpy.HkKrKyELG
ChainResidueDetails
c3ARG11-GLY30

site_idPS01194
Number of Residues24
DetailsRIBOSOMAL_L15E Ribosomal protein L15e signature. DKARrLGYkAkqGYVIYRiRVrRG
ChainResidueDetails
12ASP46-GLY69

site_idPS01199
Number of Residues20
DetailsRIBOSOMAL_L1 Ribosomal protein L1 signature. IkqIpriLGpgLNKAGkFPS
ChainResidueDetails
42ILE117-SER136

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:26245381, ECO:0007744|PDB:3JAG, ECO:0007744|PDB:3JAH
ChainResidueDetails
H3CYS21
H3CYS24
H3CYS39
H3CYS42
Y3LEU204

site_idSWS_FT_FI2
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0000250|UniProtKB:P62273
ChainResidueDetails
H3SER9
d3SER163
L3CYS56
L3CYS59

site_idSWS_FT_FI3
Number of Residues1
DetailsMOD_RES: Omega-N-methylarginine => ECO:0000250|UniProtKB:P62273
ChainResidueDetails
H3ARG12
b3SER235
b3SER236
a5LYS106

site_idSWS_FT_FI4
Number of Residues1
DetailsMOD_RES: N6-acetyllysine => ECO:0000250|UniProtKB:P62273
ChainResidueDetails
H3LYS48
Y3ALA171
E3LEU79

site_idSWS_FT_FI5
Number of Residues1
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P62277
ChainResidueDetails
F3LYS77
a3SER278
c3LYS193
62LYS170

site_idSWS_FT_FI6
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0000250|UniProtKB:P62277
ChainResidueDetails
Y3ALA52
F3LYS93
52LYS224
52LYS226
52LYS386
52LYS393

site_idSWS_FT_FI7
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0000250|UniProtKB:P23396
ChainResidueDetails
G3CYS60
Y3TRP192

site_idSWS_FT_FI8
Number of Residues1
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate => ECO:0000250|UniProtKB:P23396
ChainResidueDetails
Y3LEU176

site_idSWS_FT_FI9
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0000250|UniProtKB:P36578
ChainResidueDetails
t2PRO225
t2VAL313

site_idSWS_FT_FI10
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO1); alternate => ECO:0000250|UniProtKB:P36578
ChainResidueDetails
t2HIS347

226707

PDB entries from 2024-10-30

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