6ZA7
Structure of the apo transcriptional repressor Atu1419 (VanR) from agrobacterium fabrum
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0003677 | molecular_function | DNA binding |
| A | 0003700 | molecular_function | DNA-binding transcription factor activity |
| A | 0006351 | biological_process | DNA-templated transcription |
| A | 0006355 | biological_process | regulation of DNA-templated transcription |
| A | 0046872 | molecular_function | metal ion binding |
| B | 0003677 | molecular_function | DNA binding |
| B | 0003700 | molecular_function | DNA-binding transcription factor activity |
| B | 0006351 | biological_process | DNA-templated transcription |
| B | 0006355 | biological_process | regulation of DNA-templated transcription |
| B | 0046872 | molecular_function | metal ion binding |
| C | 0003677 | molecular_function | DNA binding |
| C | 0003700 | molecular_function | DNA-binding transcription factor activity |
| C | 0006351 | biological_process | DNA-templated transcription |
| C | 0006355 | biological_process | regulation of DNA-templated transcription |
| C | 0046872 | molecular_function | metal ion binding |
| D | 0003677 | molecular_function | DNA binding |
| D | 0003700 | molecular_function | DNA-binding transcription factor activity |
| D | 0006351 | biological_process | DNA-templated transcription |
| D | 0006355 | biological_process | regulation of DNA-templated transcription |
| D | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 5 |
| Details | binding site for residue ZN A 301 |
| Chain | Residue |
| A | ASN137 |
| A | HIS141 |
| A | HIS192 |
| A | HIS214 |
| A | GOL302 |
| site_id | AC2 |
| Number of Residues | 7 |
| Details | binding site for residue GOL A 302 |
| Chain | Residue |
| A | ALA188 |
| A | HIS214 |
| A | ZN301 |
| A | TYR133 |
| A | ASN137 |
| A | HIS141 |
| A | PRO168 |
| site_id | AC3 |
| Number of Residues | 5 |
| Details | binding site for residue ZN B 301 |
| Chain | Residue |
| B | ASN137 |
| B | HIS141 |
| B | HIS192 |
| B | HIS214 |
| B | GOL302 |
| site_id | AC4 |
| Number of Residues | 7 |
| Details | binding site for residue GOL B 302 |
| Chain | Residue |
| B | TYR133 |
| B | ASN137 |
| B | HIS141 |
| B | PRO168 |
| B | ALA188 |
| B | HIS214 |
| B | ZN301 |
| site_id | AC5 |
| Number of Residues | 6 |
| Details | binding site for residue PEG B 303 |
| Chain | Residue |
| A | HOH403 |
| B | ARG212 |
| B | HOH408 |
| B | HOH410 |
| C | ALA205 |
| C | ALA209 |
| site_id | AC6 |
| Number of Residues | 5 |
| Details | binding site for residue ZN C 301 |
| Chain | Residue |
| C | ASN137 |
| C | HIS141 |
| C | HIS192 |
| C | HIS214 |
| C | GOL302 |
| site_id | AC7 |
| Number of Residues | 7 |
| Details | binding site for residue GOL C 302 |
| Chain | Residue |
| C | TYR133 |
| C | ASN137 |
| C | HIS141 |
| C | PRO168 |
| C | LEU172 |
| C | HIS214 |
| C | ZN301 |
| site_id | AC8 |
| Number of Residues | 2 |
| Details | binding site for residue SO4 C 303 |
| Chain | Residue |
| C | GLY179 |
| C | ARG182 |
| site_id | AC9 |
| Number of Residues | 5 |
| Details | binding site for residue ZN D 301 |
| Chain | Residue |
| D | ASN137 |
| D | HIS141 |
| D | HIS192 |
| D | HIS214 |
| D | GOL302 |
| site_id | AD1 |
| Number of Residues | 6 |
| Details | binding site for residue GOL D 302 |
| Chain | Residue |
| D | TYR133 |
| D | ASN137 |
| D | HIS141 |
| D | PRO168 |
| D | HIS214 |
| D | ZN301 |
