6Z02

Photosynthetic Reaction Center From Rhodobacter Sphaeroides strain RV in surfo crystallization

Functional Information from GO Data

Chain	GOid	namespace	contents
H	0015979	biological_process	photosynthesis
H	0016168	molecular_function	chlorophyll binding
H	0019684	biological_process	photosynthesis, light reaction
H	0030077	cellular_component	plasma membrane light-harvesting complex
H	0042314	molecular_function	bacteriochlorophyll binding
H	0042717	cellular_component	plasma membrane-derived chromatophore membrane
L	0009772	biological_process	photosynthetic electron transport in photosystem II
L	0015979	biological_process	photosynthesis
L	0016168	molecular_function	chlorophyll binding
L	0019684	biological_process	photosynthesis, light reaction
L	0030077	cellular_component	plasma membrane light-harvesting complex
L	0042314	molecular_function	bacteriochlorophyll binding
L	0042717	cellular_component	plasma membrane-derived chromatophore membrane
L	0046872	molecular_function	metal ion binding
M	0009772	biological_process	photosynthetic electron transport in photosystem II
M	0015979	biological_process	photosynthesis
M	0016168	molecular_function	chlorophyll binding
M	0019684	biological_process	photosynthesis, light reaction
M	0030077	cellular_component	plasma membrane light-harvesting complex
M	0042314	molecular_function	bacteriochlorophyll binding
M	0042717	cellular_component	plasma membrane-derived chromatophore membrane
M	0046872	molecular_function	metal ion binding

Functional Information from PDB Data

site_id	AC1
Number of Residues	4
Details	binding site for residue LDA H 701

Chain	Residue
H	TRP21
H	D12705
M	PRO200
M	BCL403

---

site_id	AC2
Number of Residues	4
Details	binding site for residue LDA H 702

Chain	Residue
H	GLN32
H	TYR40
M	ARG253
M	LDA420

---

site_id	AC3
Number of Residues	4
Details	binding site for residue D12 H 703

Chain	Residue
H	D12704
H	D12705
M	CDL414
H	ALA25

---

site_id	AC4
Number of Residues	4
Details	binding site for residue D12 H 704

Chain	Residue
H	TYR29
H	PRO55
H	PHE56
H	D12703

---

site_id	AC5
Number of Residues	5
Details	binding site for residue D12 H 705

Chain	Residue
H	TRP21
H	LDA701
H	D12703
H	MYS706
M	LDA420

---

site_id	AC6
Number of Residues	2
Details	binding site for residue MYS H 706

Chain	Residue
H	TRP21
H	D12705

---

site_id	AC7
Number of Residues	4
Details	binding site for residue PO4 H 707

Chain	Residue
H	HIS126
L	TYR73
L	LYS82
M	THR21

---

site_id	AC8
Number of Residues	3
Details	binding site for residue EDO H 708

Chain	Residue
H	GLU94
H	HOH869
L	ALA1

---

site_id	AC9
Number of Residues	3
Details	binding site for residue EDO H 709

Chain	Residue
H	HIS128
H	ASN129
H	LYS132

---

site_id	AD1
Number of Residues	3
Details	binding site for residue EDO H 710

Chain	Residue
H	GLN199
H	SER200
H	ASN201

---

site_id	AD2
Number of Residues	7
Details	binding site for residue EDO H 711

Chain	Residue
H	ILE65
H	LEU66
H	GLY69
H	ARG70
H	GLY71
H	HOH911
L	HOH404

---

site_id	AD3
Number of Residues	8
Details	binding site for residue EDO H 712

Chain	Residue
H	SER80
H	VAL115
H	ALA116
H	HOH802
H	HOH857
H	HOH877
H	HOH949
M	HOH527

---

site_id	AD4
Number of Residues	5
Details	binding site for residue NA H 713

Chain	Residue
H	GLU43
H	HOH849
H	HOH944
L	SER4
L	HOH501

---

site_id	AD5
Number of Residues	6
Details	binding site for residue K H 714

Chain	Residue
H	MET134
H	ALA137
H	PHE140
H	HOH831
H	HOH987
M	HOH567

---

site_id	AD6
Number of Residues	23
Details	binding site for residue BCL L 301

Chain	Residue
L	PHE97
L	ALA124
L	ILE125
L	ALA127
L	LEU131
L	TRP156
L	VAL157
L	TYR162
L	ASN166
L	PHE167
L	HIS168
L	HIS173
L	ALA176
L	ILE177
L	PHE180
L	SER244
L	CYS247
L	MET248
L	BPH302
M	TYR210
M	BCL401
M	BCL402
M	BCL403

---

site_id	AD7
Number of Residues	18
Details	binding site for residue BPH L 302

Chain	Residue
M	LEU214
M	TRP252
M	MET256
M	BCL403
L	ALA93
L	ALA96
L	PHE97
L	TRP100
L	GLU104
L	ILE117
L	ALA120
L	PHE121
L	ALA124
L	TYR148
L	VAL241
L	BCL301
M	TYR210
M	ALA213

---

site_id	AD8
Number of Residues	13
Details	binding site for residue U10 L 303

Chain	Residue
L	HIS190
L	LEU193
L	GLU212
L	ASP213
L	PHE216
L	TYR222
L	SER223
L	ILE224
L	GLY225
L	THR226
L	ILE229
L	LEU232
M	BCL401

---

site_id	AD9
Number of Residues	2
Details	binding site for residue LDA L 304

Chain	Residue
L	VAL220
M	GLY31

---

site_id	AE1
Number of Residues	3
Details	binding site for residue D12 L 305

Chain	Residue
L	GLY77
L	ILE91
L	TRP142

---

site_id	AE2
Number of Residues	2
Details	binding site for residue MYS L 306

Chain	Residue
L	TYR115
M	D12413

---

site_id	AE3
Number of Residues	2
Details	binding site for residue D10 L 307

Chain	Residue
L	THR130
L	PHE134

---

site_id	AE4
Number of Residues	2
Details	binding site for residue DIO L 308

Chain	Residue
L	TRP266
M	PHE90

---

site_id	AE5
Number of Residues	1
Details	binding site for residue EDO L 309

Chain	Residue
L	SER239

---

site_id	AE6
Number of Residues	5
Details	binding site for residue EDO L 310

Chain	Residue
L	PHE123
L	LEU126
L	VAL241
L	PHE242
L	HOH442

---

site_id	AE7
Number of Residues	7
Details	binding site for residue EDO L 311

Chain	Residue
H	LEU241
L	CYS108
L	GLY112
L	ILE113
L	TYR115
M	GLU2
M	ARG228

---

site_id	AE8
Number of Residues	7
Details	binding site for residue EDO L 312

Chain	Residue
L	TYR162
L	GLY165
L	ASN166
L	HOH410
L	HOH446
M	ASN187
M	LEU191

---

site_id	AE9
Number of Residues	4
Details	binding site for residue EDO L 313

Chain	Residue
L	TRP151
L	HOH402
L	HOH420
M	TYR198

---

site_id	AF1
Number of Residues	8
Details	binding site for residue HTO L 314

Chain	Residue
H	ASN44
H	ASP46
H	THR48
H	PRO49
H	HOH901
L	MET139
L	THR253
L	HOH401

---

site_id	AF2
Number of Residues	4
Details	binding site for residue HTO L 315

Chain	Residue
L	ILE49
L	PRO61
L	TYR148
L	ILE150

---

site_id	AF3
Number of Residues	2
Details	binding site for residue HTO L 316

Chain	Residue
H	HIS141
L	LEU63

---

site_id	AF4
Number of Residues	18
Details	binding site for residue BCL M 401

Chain	Residue
L	HIS168
L	MET174
L	ILE177
L	THR178
L	PHE181
L	THR182
L	BCL301
L	U10303
L	HOH409
M	MET122
M	TRP157
M	ILE179
M	HIS182
M	LEU183
M	THR186
M	BCL402
M	BPH404
M	SPN407

---

site_id	AF5
Number of Residues	22
Details	binding site for residue BCL M 402

Chain	Residue
L	VAL157
L	TYR162
L	PHE181
L	BCL301
M	ALA153
M	LEU156
M	LEU160
M	THR186
M	ASN187
M	SER190
M	LEU196
M	PHE197
M	HIS202
M	SER205
M	ILE206
M	TYR210
M	VAL276
M	GLY280
M	ILE284
M	BCL401
M	BPH404
M	MYS411

---

site_id	AF6
Number of Residues	16
Details	binding site for residue BCL M 403

Chain	Residue
H	LDA701
L	TYR128
L	PHE146
L	HIS153
L	LEU154
L	BCL301
L	BPH302
M	PHE197
M	GLY203
M	ILE206
M	ALA207
M	TYR210
M	GLY211
M	LEU214
M	U10406
M	HOH525

---

site_id	AF7
Number of Residues	18
Details	binding site for residue BPH M 404

Chain	Residue
L	PHE181
L	LEU185
L	LEU189
M	SER59
M	GLY63
M	TRP66
M	PHE67
M	ALA125
M	VAL126
M	TRP129
M	THR146
M	ALA149
M	PHE150
M	ALA153
M	ALA273
M	THR277
M	BCL401
M	BCL402

---

site_id	AF8
Number of Residues	5
Details	binding site for residue FE M 405

Chain	Residue
L	HIS190
L	HIS230
M	HIS219
M	GLU234
M	HIS266

---

site_id	AF9
Number of Residues	15
Details	binding site for residue U10 M 406

Chain	Residue
L	GLY35
L	ARG103
M	MET218
M	HIS219
M	THR222
M	ALA248
M	ALA249
M	TRP252
M	MET256
M	ASN259
M	ALA260
M	ILE265
M	TRP268
M	BCL403
M	LDA420

---

site_id	AG1
Number of Residues	14
Details	binding site for residue SPN M 407

Chain	Residue
M	PHE67
M	PHE68
M	ILE70
M	GLY71
M	TRP75
M	SER119
M	PHE120
M	MET122
M	TRP157
M	GLY161
M	TRP171
M	VAL175
M	HIS182
M	BCL401

---

site_id	AG2
Number of Residues	2
Details	binding site for residue LDA M 408

Chain	Residue
M	LEU38
M	TRP41

---

site_id	AG3
Number of Residues	2
Details	binding site for residue LDA M 409

Chain	Residue
M	PHE105
M	ALA107

---

site_id	AG4
Number of Residues	7
Details	binding site for residue LDA M 410

Chain	Residue
L	GLY57
M	ARG13
M	GLY33
M	PRO34
M	PHE35
M	THR37
M	HOH522

---

site_id	AG5
Number of Residues	4
Details	binding site for residue MYS M 411

Chain	Residue
L	VAL220
M	ILE50
M	LEU52
M	BCL402

---

site_id	AG6
Number of Residues	1
Details	binding site for residue D12 M 412

Chain	Residue
M	THR289

---

site_id	AG7
Number of Residues	4
Details	binding site for residue D12 M 413

Chain	Residue
L	PHE119
L	MYS306
M	GLU2
M	GLN4

---

site_id	AG8
Number of Residues	23
Details	binding site for residue CDL M 414

Chain	Residue
H	ILE22
H	PHE23
H	GLY26
H	LEU27
H	TYR30
H	D12703
H	HOH910
L	ASN199
L	PRO200
M	GLY143
M	LYS144
M	HIS145
M	TRP148
M	TRP155
M	ARG267
M	ILE270
M	TRP271
M	LEU278
M	HOH507
M	HOH531
M	HOH535
M	HOH565
M	HOH586

---

site_id	AG9
Number of Residues	6
Details	binding site for residue PO4 M 415

Chain	Residue
M	ASN28
M	GLY53
M	SER54
M	HOH503
M	HOH547
M	HOH549

---

site_id	AH1
Number of Residues	5
Details	binding site for residue PO4 M 416

Chain	Residue
M	TYR3
M	GLN4
M	ASN5
M	ILE6
M	PHE7

---

site_id	AH2
Number of Residues	8
Details	binding site for residue EDO M 417

Chain	Residue
H	ARG177
H	PHE178
H	GLN194
H	CYS234
M	SER227
M	ARG228
M	GLY230
M	ARG233

---

site_id	AH3
Number of Residues	7
Details	binding site for residue EDO M 418

Chain	Residue
H	GLN194
L	HIS116
M	TYR3
M	LEU224
M	ALA225
M	SER227
M	ARG228

---

site_id	AH4
Number of Residues	1
Details	binding site for residue EDO M 419

Chain	Residue
M	LEU151

---

site_id	AH5
Number of Residues	6
Details	binding site for residue LDA M 420

Chain	Residue
H	LDA702
H	D12705
L	PHE29
M	MET256
M	GLY257
M	U10406

---

Functional Information from PROSITE/UniProt

site_id	PS00244
Number of Residues	27
Details	REACTION_CENTER Photosynthetic reaction center proteins signature. NfhynPaHmiAitffftnalalAlHGA

Chain	Residue	Details
L	ASN166-ALA192
M	ASN195-ALA221

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	278
Details	Transmembrane: {"description":"Helical"}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	58
Details	Topological domain: {"description":"Cytoplasmic","evidences":[{"source":"PubMed","id":"1645718","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI3
Number of Residues	87
Details	Topological domain: {"description":"Periplasmic","evidences":[{"source":"PubMed","id":"1645718","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI4
Number of Residues	4
Details	Binding site: {"description":"axial binding residue"}

Chain

Residue

Details

---

site_id	SWS_FT_FI5
Number of Residues	7
Details	Binding site: {}

Chain

Residue

Details

---