Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

6YYJ

Crystal structure of native Phycocyanin from T. elongatus in spacegroup P21212 at 2.1 Angstroms

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0015979	biological_process	photosynthesis
A	0030076	cellular_component	light-harvesting complex
A	0030089	cellular_component	phycobilisome
A	0031676	cellular_component	plasma membrane-derived thylakoid membrane
B	0015979	biological_process	photosynthesis
B	0030076	cellular_component	light-harvesting complex
B	0030089	cellular_component	phycobilisome
B	0031676	cellular_component	plasma membrane-derived thylakoid membrane
C	0015979	biological_process	photosynthesis
C	0030076	cellular_component	light-harvesting complex
C	0030089	cellular_component	phycobilisome
C	0031676	cellular_component	plasma membrane-derived thylakoid membrane
D	0015979	biological_process	photosynthesis
D	0030076	cellular_component	light-harvesting complex
D	0030089	cellular_component	phycobilisome
D	0031676	cellular_component	plasma membrane-derived thylakoid membrane
E	0015979	biological_process	photosynthesis
E	0030076	cellular_component	light-harvesting complex
E	0030089	cellular_component	phycobilisome
E	0031676	cellular_component	plasma membrane-derived thylakoid membrane
F	0015979	biological_process	photosynthesis
F	0030076	cellular_component	light-harvesting complex
F	0030089	cellular_component	phycobilisome
F	0031676	cellular_component	plasma membrane-derived thylakoid membrane

Functional Information from PDB Data

site_id	AC1
Number of Residues	24
Details	binding site for residue PXQ A 201

Chain	Residue
A	THR66
A	TYR90
A	TYR91
A	TYR110
A	LEU111
A	ILE118
A	PHE122
A	LEU124
A	TRP128
A	TYR129
A	HOH305
A	SER72
A	HOH311
A	HOH315
F	ARG57
F	THR75
F	ASN76
A	GLN73
A	TYR74
A	ALA75
A	LYS83
A	CYS84
A	ARG86
A	ASP87

site_id	AC2
Number of Residues	3
Details	binding site for residue PGE A 202

Chain	Residue
A	TYR156
A	ASN159
E	PHE18

site_id	AC3
Number of Residues	12
Details	binding site for residue PXQ B 201

Chain	Residue
B	MEN72
B	ARG78
B	ALA81
B	CYS82
B	ARG84
B	ASP85
B	ILE88
B	ARG108
B	LEU113
B	LEU120
B	THR122
B	SER126

site_id	AC4
Number of Residues	18
Details	binding site for residue PXQ B 202

Chain	Residue
A	ASN21
A	LEU24
A	ASP28
B	ASN35
B	LYS36
B	LEU38
B	ASP39
B	ASN143
B	ILE148
B	THR149
B	PRO150
B	GLY151
B	CYS153
B	HOH303
B	HOH306
D	HOH319
E	ARG33
E	GLN145

site_id	AC5
Number of Residues	2
Details	binding site for residue MES B 203

Chain	Residue
B	ASP106
B	ALA170

site_id	AC6
Number of Residues	5
Details	binding site for residue PGE C 202

Chain	Residue
C	GLN57
C	THR67
C	THR77
C	PRO78
C	LYS81

site_id	AC7
Number of Residues	3
Details	binding site for residue MES C 203

Chain	Residue
C	LYS62
C	GLU131
C	TYR135

site_id	AC8
Number of Residues	2
Details	binding site for residue PGE C 204

Chain	Residue
C	TYR156
C	ASN159

site_id	AC9
Number of Residues	4
Details	binding site for residue MES D 203

Chain	Residue
C	GLY144
C	ALA147
D	GLY147
D	ILE148

site_id	AD1
Number of Residues	2
Details	binding site for residue PGE E 202

Chain	Residue
E	LYS81
E	HOH327

site_id	AD2
Number of Residues	3
Details	binding site for residue PGE E 203

Chain	Residue
E	TYR156
E	ASN159
E	ALA160

site_id	AD3
Number of Residues	3
Details	binding site for residue MES E 204

Chain	Residue
E	LYS62
E	GLU131
E	TYR135

site_id	AD4
Number of Residues	28
Details	binding site for Di-peptide PXQ C 201 and CYS C 84

Chain	Residue
C	ASP87
C	ILE88
C	TYR90
C	TYR110
C	PHE122
C	LEU124
C	TRP128
C	TYR129
C	HOH307
C	HOH316
B	ARG57
B	ILE67
B	TYR74
B	THR75
B	ASN76
C	VAL59
C	TYR60
C	THR66
C	SER72
C	GLN73
C	TYR74
C	ALA75
C	GLY80
C	LYS81
C	ALA82
C	LYS83
C	ALA85
C	ARG86

site_id	AD5
Number of Residues	15
Details	binding site for Di-peptide PXQ D 201 and CYS D 82

Chain	Residue
D	MEN72
D	ALA73
D	ARG78
D	MET79
D	ALA80
D	ALA81
D	LEU83
D	ARG84
D	ASP85
D	MET86
D	ARG108
D	LEU113
D	LEU120
D	THR122
D	SER126

site_id	AD6
Number of Residues	23
Details	binding site for Di-peptide PXQ D 202 and CYS D 153

Chain	Residue
C	ASN21
C	LEU24
C	ASP28
C	ARG33
C	GLN145
D	ASN35
D	LYS36
D	LEU38
D	ASP39
D	ALA142
D	ASN143
D	ILE148
D	THR149
D	PRO150
D	GLY151
D	ASP152
D	SER154
D	ALA155
D	LEU156
D	MET157
D	HOH310
D	HOH318
D	HOH322

site_id	AD7
Number of Residues	26
Details	binding site for Di-peptide PXQ E 201 and CYS E 84

Chain	Residue
D	ARG57
D	ILE67
D	THR75
D	ASN76
E	TYR60
E	THR66
E	SER72
E	GLN73
E	TYR74
E	ALA75
E	GLY80
E	LYS81
E	ALA82
E	LYS83
E	ALA85
E	ARG86
E	ASP87
E	ILE88
E	TYR110
E	PHE122
E	LEU124
E	TRP128
E	TYR129
E	HOH304
E	HOH322
E	HOH324

site_id	AD8
Number of Residues	15
Details	binding site for Di-peptide PXQ F 500 and CYS F 82

Chain	Residue
F	MEN72
F	ALA73
F	ARG77
F	ARG78
F	MET79
F	ALA80
F	ALA81
F	LEU83
F	ARG84
F	ASP85
F	MET86
F	ARG108
F	LEU113
F	LEU120
F	THR122

site_id	AD9
Number of Residues	21
Details	binding site for Di-peptide PXQ F 501 and CYS F 153

Chain	Residue
A	ARG33
A	GLN145
E	LEU24
E	ASP28
E	HOH308
F	ASN35
F	LYS36
F	LEU38
F	ASP39
F	ASN143
F	ASP144
F	ILE148
F	THR149
F	PRO150
F	GLY151
F	ASP152
F	SER154
F	ALA155
F	LEU156
F	MET157
F	HOH604

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	6
Details	Binding site: {"description":"covalent","evidences":[{"source":"PDB","id":"1JBO","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1KTP","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3L0F","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4Q70","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4Z8K","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4ZIZ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5MJM","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5MJP","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5MJQ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5O7M","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5UVK","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

site_id	SWS_FT_FI2
Number of Residues	3
Details	Binding site: {"description":"covalent","evidences":[{"source":"PDB","id":"1JBO","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1KTP","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4Q70","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4Z8K","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4ZIZ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5MJM","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5MJP","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5MJQ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5O7M","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5UVK","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

site_id	SWS_FT_FI3
Number of Residues	3
Details	Modified residue: {"description":"N4-methylasparagine","evidences":[{"source":"PubMed","id":"12615541","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1JBO","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1KTP","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		PDB format (full)
		Validation report (PDF)
		EDMap 2fo-fc (MTZ)