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6YXX

State A of the Trypanosoma brucei mitoribosomal large subunit assembly intermediate

This is a non-PDB format compatible entry.
Functional Information from GO Data
ChainGOidnamespacecontents
A10003735molecular_functionstructural constituent of ribosome
A10005739cellular_componentmitochondrion
A10005762cellular_componentmitochondrial large ribosomal subunit
A20003735molecular_functionstructural constituent of ribosome
A20005737cellular_componentcytoplasm
A20005739cellular_componentmitochondrion
A20005761cellular_componentmitochondrial ribosome
A20005762cellular_componentmitochondrial large ribosomal subunit
A20005840cellular_componentribosome
A20006412biological_processtranslation
A20031981cellular_componentnuclear lumen
A20032543biological_processmitochondrial translation
A20097014cellular_componentciliary plasm
A21990904cellular_componentribonucleoprotein complex
A50005634cellular_componentnucleus
A50005737cellular_componentcytoplasm
AE0003735molecular_functionstructural constituent of ribosome
AE0005739cellular_componentmitochondrion
AE0005762cellular_componentmitochondrial large ribosomal subunit
AE0005840cellular_componentribosome
AE0006412biological_processtranslation
AE1990904cellular_componentribonucleoprotein complex
AF0003735molecular_functionstructural constituent of ribosome
AF0005840cellular_componentribosome
AF0006412biological_processtranslation
AF1990904cellular_componentribonucleoprotein complex
AI0005737cellular_componentcytoplasm
AI0005739cellular_componentmitochondrion
AI0005762cellular_componentmitochondrial large ribosomal subunit
AI0031981cellular_componentnuclear lumen
AI0097014cellular_componentciliary plasm
AK0003735molecular_functionstructural constituent of ribosome
AK0005737cellular_componentcytoplasm
AK0005739cellular_componentmitochondrion
AK0005762cellular_componentmitochondrial large ribosomal subunit
AK0005840cellular_componentribosome
AK0006412biological_processtranslation
AK0070180molecular_functionlarge ribosomal subunit rRNA binding
AK1990904cellular_componentribonucleoprotein complex
AN0003729molecular_functionmRNA binding
AN0003735molecular_functionstructural constituent of ribosome
AN0005739cellular_componentmitochondrion
AN0005762cellular_componentmitochondrial large ribosomal subunit
AN0005840cellular_componentribosome
AN0006412biological_processtranslation
AN0017148biological_processnegative regulation of translation
AN0020023cellular_componentkinetoplast
AN1990904cellular_componentribonucleoprotein complex
AP0003735molecular_functionstructural constituent of ribosome
AP0005737cellular_componentcytoplasm
AP0005739cellular_componentmitochondrion
AP0005762cellular_componentmitochondrial large ribosomal subunit
AP0005840cellular_componentribosome
AP0006412biological_processtranslation
AP0015934cellular_componentlarge ribosomal subunit
AP1990904cellular_componentribonucleoprotein complex
AR0000315cellular_componentorganellar large ribosomal subunit
AR0003735molecular_functionstructural constituent of ribosome
AR0005739cellular_componentmitochondrion
AR0005762cellular_componentmitochondrial large ribosomal subunit
AR0005840cellular_componentribosome
AR0006412biological_processtranslation
AR0015934cellular_componentlarge ribosomal subunit
AR1990904cellular_componentribonucleoprotein complex
AT0005737cellular_componentcytoplasm
AT0005739cellular_componentmitochondrion
AU0003735molecular_functionstructural constituent of ribosome
AU0005737cellular_componentcytoplasm
AU0005739cellular_componentmitochondrion
AU0005761cellular_componentmitochondrial ribosome
AU0005762cellular_componentmitochondrial large ribosomal subunit
AU0005840cellular_componentribosome
AU0006412biological_processtranslation
AU0019843molecular_functionrRNA binding
AU0020023cellular_componentkinetoplast
AU1990904cellular_componentribonucleoprotein complex
AV0003723molecular_functionRNA binding
AV0003735molecular_functionstructural constituent of ribosome
AV0005840cellular_componentribosome
AV0006412biological_processtranslation
AW0003735molecular_functionstructural constituent of ribosome
AW0005840cellular_componentribosome
AW0006412biological_processtranslation
AW0015934cellular_componentlarge ribosomal subunit
AW0019843molecular_functionrRNA binding
AW1990904cellular_componentribonucleoprotein complex
AX0003735molecular_functionstructural constituent of ribosome
AX0005737cellular_componentcytoplasm
AX0005739cellular_componentmitochondrion
AX0005762cellular_componentmitochondrial large ribosomal subunit
AX0005840cellular_componentribosome
AX0006412biological_processtranslation
AX1990904cellular_componentribonucleoprotein complex
AY0003723molecular_functionRNA binding
AY0003735molecular_functionstructural constituent of ribosome
AY0005840cellular_componentribosome
AY0006412biological_processtranslation
AY1990904cellular_componentribonucleoprotein complex
Ae0005654cellular_componentnucleoplasm
Ae0005737cellular_componentcytoplasm
Ae0005739cellular_componentmitochondrion
Ae0005762cellular_componentmitochondrial large ribosomal subunit
Ae0097014cellular_componentciliary plasm
Af0005739cellular_componentmitochondrion
Af0005762cellular_componentmitochondrial large ribosomal subunit
Ag0003735molecular_functionstructural constituent of ribosome
Ag0005739cellular_componentmitochondrion
Ag0005762cellular_componentmitochondrial large ribosomal subunit
Ag0005840cellular_componentribosome
Ag0032543biological_processmitochondrial translation
Ag1990904cellular_componentribonucleoprotein complex
Al0005739cellular_componentmitochondrion
Al0005762cellular_componentmitochondrial large ribosomal subunit
BE0005739cellular_componentmitochondrion
BE0005762cellular_componentmitochondrial large ribosomal subunit
BH0005739cellular_componentmitochondrion
BH0005762cellular_componentmitochondrial large ribosomal subunit
BJ0005739cellular_componentmitochondrion
BJ0005762cellular_componentmitochondrial large ribosomal subunit
BQ0000413biological_processprotein peptidyl-prolyl isomerization
BQ0003755molecular_functionpeptidyl-prolyl cis-trans isomerase activity
BQ0005634cellular_componentnucleus
BQ0005737cellular_componentcytoplasm
BQ0005762cellular_componentmitochondrial large ribosomal subunit
BQ0006357biological_processregulation of transcription by RNA polymerase II
BQ0006457biological_processprotein folding
BQ0016018molecular_functioncyclosporin A binding
BQ0031981cellular_componentnuclear lumen
BQ0097014cellular_componentciliary plasm
BQ0140839molecular_functionRNA polymerase II CTD heptapeptide repeat P3 isomerase activity
BQ0140840molecular_functionRNA polymerase II CTD heptapeptide repeat P6 isomerase activity
BR0005739cellular_componentmitochondrion
BS0005737cellular_componentcytoplasm
BS0005739cellular_componentmitochondrion
BS0005762cellular_componentmitochondrial large ribosomal subunit
BW0005739cellular_componentmitochondrion
BW0005762cellular_componentmitochondrial large ribosomal subunit
BW0010608biological_processpost-transcriptional regulation of gene expression
BZ0000413biological_processprotein peptidyl-prolyl isomerization
BZ0003755molecular_functionpeptidyl-prolyl cis-trans isomerase activity
BZ0005737cellular_componentcytoplasm
BZ0005739cellular_componentmitochondrion
BZ0005762cellular_componentmitochondrial large ribosomal subunit
BZ0005829cellular_componentcytosol
BZ0006357biological_processregulation of transcription by RNA polymerase II
BZ0006457biological_processprotein folding
BZ0016018molecular_functioncyclosporin A binding
BZ0020023cellular_componentkinetoplast
BZ0140839molecular_functionRNA polymerase II CTD heptapeptide repeat P3 isomerase activity
BZ0140840molecular_functionRNA polymerase II CTD heptapeptide repeat P6 isomerase activity
Bb0005737cellular_componentcytoplasm
Bb0005739cellular_componentmitochondrion
Bb0020023cellular_componentkinetoplast
Bc0005739cellular_componentmitochondrion
Bf0005739cellular_componentmitochondrion
Bf0020023cellular_componentkinetoplast
E10005739cellular_componentmitochondrion
E10005762cellular_componentmitochondrial large ribosomal subunit
E40005739cellular_componentmitochondrion
E40005762cellular_componentmitochondrial large ribosomal subunit
E60003729molecular_functionmRNA binding
E60005739cellular_componentmitochondrion
E60005762cellular_componentmitochondrial large ribosomal subunit
E80005739cellular_componentmitochondrion
E80005762cellular_componentmitochondrial large ribosomal subunit
EA0005525molecular_functionGTP binding
EB0003676molecular_functionnucleic acid binding
EB0003724molecular_functionRNA helicase activity
EB0004386molecular_functionhelicase activity
EB0005524molecular_functionATP binding
EB0016787molecular_functionhydrolase activity
EC0001522biological_processpseudouridine synthesis
EC0003723molecular_functionRNA binding
EC0005739cellular_componentmitochondrion
EC0005762cellular_componentmitochondrial large ribosomal subunit
EC0006396biological_processRNA processing
EC0009451biological_processRNA modification
EC0009982molecular_functionpseudouridine synthase activity
EC0016853molecular_functionisomerase activity
ED0001522biological_processpseudouridine synthesis
ED0003723molecular_functionRNA binding
ED0005634cellular_componentnucleus
ED0005739cellular_componentmitochondrion
ED0005762cellular_componentmitochondrial large ribosomal subunit
ED0009451biological_processRNA modification
ED0009982molecular_functionpseudouridine synthase activity
EE0003723molecular_functionRNA binding
EE0006396biological_processRNA processing
EE0008173molecular_functionRNA methyltransferase activity
EF0003723molecular_functionRNA binding
EF0006396biological_processRNA processing
EF0008168molecular_functionmethyltransferase activity
EF0008173molecular_functionRNA methyltransferase activity
EF0032259biological_processmethylation
EG0005730cellular_componentnucleolus
EM0003924molecular_functionGTPase activity
EM0005525molecular_functionGTP binding
EM0005739cellular_componentmitochondrion
EM0005762cellular_componentmitochondrial large ribosomal subunit
EM0032543biological_processmitochondrial translation
ER0000035molecular_functionacyl binding
ER0000036molecular_functionacyl carrier activity
ER0005739cellular_componentmitochondrion
ER0005747cellular_componentobsolete mitochondrial respiratory chain complex I
ER0005759cellular_componentmitochondrial matrix
ER0006633biological_processfatty acid biosynthetic process
ES0006629biological_processlipid metabolic process
ET0005739cellular_componentmitochondrion
ET0005762cellular_componentmitochondrial large ribosomal subunit
Functional Information from PROSITE/UniProt
site_idPS00012
Number of Residues16
DetailsPHOSPHOPANTETHEINE Phosphopantetheine attachment site. DLGLNSLDVVEVVFAI
ChainResidueDetails
ERASP100-ILE115

site_idPS00018
Number of Residues13
DetailsEF_HAND_1 EF-hand calcium-binding domain. DNNDEGDVGgeDL
ChainResidueDetails
ESASP440-LEU452

site_idPS00142
Number of Residues10
DetailsZINC_PROTEASE Neutral zinc metallopeptidases, zinc-binding region signature. NEEHEFVHQY
ChainResidueDetails
BcASN59-TYR68

site_idPS00214
Number of Residues18
DetailsFABP Cytosolic fatty-acid binding proteins signature. AMFeVekDgGFDnFILKR
ChainResidueDetails
A1ALA126-ARG143

227111

PDB entries from 2024-11-06

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