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6YVF

Structure of SARS-CoV-2 Main Protease bound to AZD6482.

Functional Information from GO Data
ChainGOidnamespacecontents
A0008233molecular_functionpeptidase activity
A0019082biological_processviral protein processing
Functional Information from PDB Data
site_idAC1
Number of Residues13
Detailsbinding site for residue A82 A 401
ChainResidue
AASN51
AVAL186
AARG188
APEG409
AHOH509
AASN63
AILE78
AGLY79
AHIS80
ASER81
ALYS88
ALYS90
APRO184

site_idAC2
Number of Residues4
Detailsbinding site for residue CL A 402
ChainResidue
AASN95
ALYS97
ADMS405
AHOH576

site_idAC3
Number of Residues5
Detailsbinding site for residue CL A 403
ChainResidue
APRO9
AGLY11
ALYS12
AGLU14
AHOH766

site_idAC4
Number of Residues8
Detailsbinding site for residue DMS A 404
ChainResidue
AGLN74
ALEU75
AARG76
APHE223
ATHR224
AASP263
AHOH583
AHOH590

site_idAC5
Number of Residues5
Detailsbinding site for residue DMS A 405
ChainResidue
AGLY15
AMET17
ALYS97
ACL402
AHOH569

site_idAC6
Number of Residues6
Detailsbinding site for residue DMS A 406
ChainResidue
APHE140
ALEU141
AASN142
AHIS163
AMET165
AGLU166

site_idAC7
Number of Residues2
Detailsbinding site for residue DMS A 407
ChainResidue
ATYR101
AHOH797

site_idAC8
Number of Residues6
Detailsbinding site for residue PEG A 408
ChainResidue
AGLY23
AHIS64
AASN65
APHE223
AHOH580
AHOH681

site_idAC9
Number of Residues12
Detailsbinding site for residue PEG A 409
ChainResidue
ALYS61
ASER62
AHIS80
APRO184
AA82401
AHOH502
AHOH506
AHOH509
AHOH538
AHOH558
AHOH585
AHOH669

site_idAD1
Number of Residues6
Detailsbinding site for residue PEG A 410
ChainResidue
AASP33
AASP34
AASP92
AHOH575
AHOH667
AHOH700

site_idAD2
Number of Residues4
Detailsbinding site for residue CA A 411
ChainResidue
ALYS100
AGLU270
AGLN273
AASN274

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: For 3CL-PRO activity => ECO:0000255|PROSITE-ProRule:PRU00772, ECO:0000305|PubMed:32198291
ChainResidueDetails
AHIS41

site_idSWS_FT_FI2
Number of Residues1
DetailsACT_SITE: Nucleophile; for 3CL-PRO activity => ECO:0000255|PROSITE-ProRule:PRU00772, ECO:0000269|PubMed:32198291
ChainResidueDetails
ACYS145

site_idSWS_FT_FI3
Number of Residues1
DetailsSITE: Cleavage; by 3CL-PRO => ECO:0000250|UniProtKB:P0C6V3
ChainResidueDetails
AGLN306

218853

PDB entries from 2024-04-24

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