6YS5
Acinetobacter baumannii ribosome-amikacin complex - 30S subunit head
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| d | 0003676 | molecular_function | nucleic acid binding |
| d | 0003723 | molecular_function | RNA binding |
| d | 0003729 | molecular_function | mRNA binding |
| d | 0003735 | molecular_function | structural constituent of ribosome |
| d | 0005840 | cellular_component | ribosome |
| d | 0006412 | biological_process | translation |
| d | 0019843 | molecular_function | rRNA binding |
| d | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| d | 1990904 | cellular_component | ribonucleoprotein complex |
| h | 0000049 | molecular_function | tRNA binding |
| h | 0003723 | molecular_function | RNA binding |
| h | 0003735 | molecular_function | structural constituent of ribosome |
| h | 0005840 | cellular_component | ribosome |
| h | 0006412 | biological_process | translation |
| h | 0015935 | cellular_component | small ribosomal subunit |
| h | 0019843 | molecular_function | rRNA binding |
| h | 1990904 | cellular_component | ribonucleoprotein complex |
| j | 0003723 | molecular_function | RNA binding |
| j | 0003735 | molecular_function | structural constituent of ribosome |
| j | 0005737 | cellular_component | cytoplasm |
| j | 0005840 | cellular_component | ribosome |
| j | 0006412 | biological_process | translation |
| j | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| j | 0043232 | cellular_component | intracellular non-membrane-bounded organelle |
| j | 1990904 | cellular_component | ribonucleoprotein complex |
| k | 0000049 | molecular_function | tRNA binding |
| k | 0003723 | molecular_function | RNA binding |
| k | 0003735 | molecular_function | structural constituent of ribosome |
| k | 0005840 | cellular_component | ribosome |
| k | 0006412 | biological_process | translation |
| k | 1990904 | cellular_component | ribonucleoprotein complex |
| n | 0000049 | molecular_function | tRNA binding |
| n | 0003676 | molecular_function | nucleic acid binding |
| n | 0003723 | molecular_function | RNA binding |
| n | 0003735 | molecular_function | structural constituent of ribosome |
| n | 0005829 | cellular_component | cytosol |
| n | 0005840 | cellular_component | ribosome |
| n | 0006412 | biological_process | translation |
| n | 0015935 | cellular_component | small ribosomal subunit |
| n | 0019843 | molecular_function | rRNA binding |
| n | 1990904 | cellular_component | ribonucleoprotein complex |
| o | 0003735 | molecular_function | structural constituent of ribosome |
| o | 0005737 | cellular_component | cytoplasm |
| o | 0005840 | cellular_component | ribosome |
| o | 0006412 | biological_process | translation |
| o | 0015935 | cellular_component | small ribosomal subunit |
| o | 0019843 | molecular_function | rRNA binding |
| o | 1990904 | cellular_component | ribonucleoprotein complex |
| t | 0000028 | biological_process | ribosomal small subunit assembly |
| t | 0003723 | molecular_function | RNA binding |
| t | 0003735 | molecular_function | structural constituent of ribosome |
| t | 0005737 | cellular_component | cytoplasm |
| t | 0005840 | cellular_component | ribosome |
| t | 0006412 | biological_process | translation |
| t | 0015935 | cellular_component | small ribosomal subunit |
| t | 0019843 | molecular_function | rRNA binding |
| t | 1990904 | cellular_component | ribonucleoprotein complex |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 1 |
| Details | binding site for residue MG 3 1601 |
| Chain | Residue |
| 3 | C931 |
| site_id | AC2 |
| Number of Residues | 1 |
| Details | binding site for residue MG 3 1603 |
| Chain | Residue |
| 3 | U1046 |
| site_id | AC3 |
| Number of Residues | 2 |
| Details | binding site for residue MG 3 1604 |
| Chain | Residue |
| 3 | C1051 |
| 3 | A1194 |
| site_id | AC4 |
| Number of Residues | 3 |
| Details | binding site for residue MG 3 1605 |
| Chain | Residue |
| 3 | C1051 |
| 3 | A1194 |
| 3 | G1195 |
| site_id | AC5 |
| Number of Residues | 2 |
| Details | binding site for residue MG 3 1606 |
| Chain | Residue |
| 3 | A961 |
| 3 | U1196 |
| site_id | AC6 |
| Number of Residues | 5 |
| Details | binding site for residue MG 3 1607 |
| Chain | Residue |
| 3 | G1050 |
| 3 | G1055 |
| 3 | C1056 |
| 3 | G1195 |
| 3 | U1196 |
| site_id | AC7 |
| Number of Residues | 2 |
| Details | binding site for residue MG 3 1608 |
| Chain | Residue |
| 3 | U1092 |
| 3 | G1105 |
| site_id | AC8 |
| Number of Residues | 1 |
| Details | binding site for residue MG 3 1609 |
| Chain | Residue |
| 3 | A1107 |
| site_id | AC9 |
| Number of Residues | 1 |
| Details | binding site for residue MG 3 1610 |
| Chain | Residue |
| 3 | G1382 |
| site_id | AD1 |
| Number of Residues | 1 |
| Details | binding site for residue MG 3 1611 |
| Chain | Residue |
| 3 | A934 |
| site_id | AD2 |
| Number of Residues | 1 |
| Details | binding site for residue MG 3 1612 |
| Chain | Residue |
| 3 | C969 |
| site_id | AD3 |
| Number of Residues | 1 |
| Details | binding site for residue MG 3 1613 |
| Chain | Residue |
| 3 | C977 |
| site_id | AD4 |
| Number of Residues | 2 |
| Details | binding site for residue MG 3 1614 |
| Chain | Residue |
| 3 | G990 |
| 3 | G1038 |
| site_id | AD5 |
| Number of Residues | 2 |
| Details | binding site for residue MG 3 1616 |
| Chain | Residue |
| 3 | G1065 |
| 3 | G1091 |
| site_id | AD6 |
| Number of Residues | 5 |
| Details | binding site for residue MG 3 1617 |
| Chain | Residue |
| 3 | U1049 |
| 3 | C1197 |
| 3 | U1202 |
| 3 | G1203 |
| 3 | G1204 |
| site_id | AD7 |
| Number of Residues | 1 |
| Details | binding site for residue MG 3 1618 |
| Chain | Residue |
| 3 | U1221 |
| site_id | AD8 |
| Number of Residues | 1 |
| Details | binding site for residue MG 3 1619 |
| Chain | Residue |
| 3 | G1331 |
| site_id | AD9 |
| Number of Residues | 2 |
| Details | binding site for residue MG 3 1620 |
| Chain | Residue |
| 3 | C1300 |
| 3 | G1301 |
| site_id | AE1 |
| Number of Residues | 1 |
| Details | binding site for residue MG 3 1621 |
| Chain | Residue |
| 3 | G1367 |
| site_id | AE2 |
| Number of Residues | 1 |
| Details | binding site for residue MG 3 1622 |
| Chain | Residue |
| 3 | G1367 |
| site_id | AE3 |
| Number of Residues | 1 |
| Details | binding site for residue MG j 201 |
| Chain | Residue |
| j | SER126 |
| site_id | AE4 |
| Number of Residues | 4 |
| Details | binding site for residue MG n 201 |
| Chain | Residue |
| 3 | U1327 |
| n | THR20 |
| n | ILE22 |
| n | ILE25 |
Functional Information from PROSITE/UniProt
| site_id | PS00052 |
| Number of Residues | 27 |
| Details | RIBOSOMAL_S7 Ribosomal protein S7 signature. SqTiakFMnhvmqdGKKsiaesIVygA |
| Chain | Residue | Details |
| h | SER20-ALA46 |
| site_id | PS00323 |
| Number of Residues | 25 |
| Details | RIBOSOMAL_S19 Ribosomal protein S19 signature. NGRnhvpviVtehmVGhkLGEFapT |
| Chain | Residue | Details |
| t | ASN53-THR77 |
| site_id | PS00360 |
| Number of Residues | 19 |
| Details | RIBOSOMAL_S9 Ribosomal protein S9 signature. GGGigGQagAirhGiTRAL |
| Chain | Residue | Details |
| j | GLY67-LEU85 |
| site_id | PS00361 |
| Number of Residues | 16 |
| Details | RIBOSOMAL_S10 Ribosomal protein S10 signature. AkrtGAqvcGPIpMPT |
| Chain | Residue | Details |
| k | ALA29-THR44 |
| site_id | PS00527 |
| Number of Residues | 23 |
| Details | RIBOSOMAL_S14 Ribosomal protein S14 signature. R.CgltgrphgyfrkFGLSRnKLR |
| Chain | Residue | Details |
| o | ARG63-ARG85 |
| site_id | PS00548 |
| Number of Residues | 35 |
| Details | RIBOSOMAL_S3 Ribosomal protein S3 signature. ARtewyreGrVplHt..LradIDyatmraeTtyGtiG |
| Chain | Residue | Details |
| d | ALA163-GLY197 |
| site_id | PS00646 |
| Number of Residues | 14 |
| Details | RIBOSOMAL_S13_1 Ribosomal protein S13 signature. RGlRHrrSlpVRGQ |
| Chain | Residue | Details |
| n | ARG87-GLN100 |
