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6YLT

Translation initiation factor 4E in complex with 3-MeBn7GpppG mRNA 5' cap analog

Functional Information from GO Data
ChainGOidnamespacecontents
A0003723molecular_functionRNA binding
A0003743molecular_functiontranslation initiation factor activity
A0005737cellular_componentcytoplasm
A0006413biological_processtranslational initiation
B0003723molecular_functionRNA binding
B0003743molecular_functiontranslation initiation factor activity
B0005737cellular_componentcytoplasm
B0006413biological_processtranslational initiation
C0003723molecular_functionRNA binding
C0003743molecular_functiontranslation initiation factor activity
C0005737cellular_componentcytoplasm
C0006413biological_processtranslational initiation
D0003723molecular_functionRNA binding
D0003743molecular_functiontranslation initiation factor activity
D0005737cellular_componentcytoplasm
D0006413biological_processtranslational initiation
Functional Information from PDB Data
site_idAC1
Number of Residues25
Detailsbinding site for residue P3E A 300
ChainResidue
AASN50
ATRP102
AGLU103
AARG112
AASP143
AVAL153
AASN155
AARG157
ALYS162
ATRP166
AARG186
AASP51
AHOH401
AHOH403
AHOH406
AHOH423
AHOH442
AHOH444
ALYS52
ALYS54
ATRP56
AASN59
AASP90
ASER92
APRO100

site_idAC2
Number of Residues21
Detailsbinding site for residue P3E B 300
ChainResidue
BASN50
BASP51
BLYS52
BLYS54
BTHR55
BTRP56
BASN59
BASP90
BSER92
BPRO100
BTRP102
BGLU103
BVAL153
BARG157
BTRP166
BARG186
BHOH402
BHOH432
BHOH437
BHOH438
BHOH451

site_idAC3
Number of Residues8
Detailsbinding site for residue P3E C 300
ChainResidue
CASP90
CSER92
CPRO100
CTRP102
CGLU103
CVAL153
CARG157
CHOH422

site_idAC4
Number of Residues9
Detailsbinding site for residue P3E D 300
ChainResidue
DTRP56
DTRP102
DGLU103
DARG112
DVAL153
DASN155
DARG157
DTRP166
DHOH422

Functional Information from PROSITE/UniProt
site_idPS00813
Number of Residues24
DetailsIF4E Eukaryotic initiation factor 4E signature. DYslFKdgIePmWEDeknkrGGRW
ChainResidueDetails
AASP90-TRP113

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues16
DetailsBINDING: BINDING => ECO:0000269|PubMed:10394359, ECO:0000269|PubMed:9200613
ChainResidueDetails
ATRP56
CTRP102
CARG157
CTHR205
DTRP56
DTRP102
DARG157
DTHR205
ATRP102
AARG157
ATHR205
BTRP56
BTRP102
BARG157
BTHR205
CTRP56

site_idSWS_FT_FI2
Number of Residues4
DetailsMOD_RES: Phosphoserine; by PKC and MKNK2 => ECO:0000269|PubMed:17689282
ChainResidueDetails
ASER209
BSER209
CSER209
DSER209

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PDB entries from 2024-07-24

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