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6YLR

Translation initiation factor 4E in complex with bn7GpppG mRNA 5' cap analog

Functional Information from GO Data
ChainGOidnamespacecontents
A0003723molecular_functionRNA binding
A0003743molecular_functiontranslation initiation factor activity
A0005737cellular_componentcytoplasm
A0006413biological_processtranslational initiation
B0003723molecular_functionRNA binding
B0003743molecular_functiontranslation initiation factor activity
B0005737cellular_componentcytoplasm
B0006413biological_processtranslational initiation
Functional Information from PDB Data
site_idAC1
Number of Residues23
Detailsbinding site for residue OYE A 300
ChainResidue
APHE48
AGLU103
AARG112
AARG157
ATRP166
AHOH409
AHOH410
AHOH415
AHOH417
AHOH424
AHOH438
ALYS52
AHOH449
AHOH475
AHOH481
AHOH487
ALYS54
ALYS54
ATRP56
AASN59
AARG61
AMET101
ATRP102

site_idAC2
Number of Residues7
Detailsbinding site for residue OYE B 300
ChainResidue
BTRP56
BMET101
BTRP102
BGLU103
BARG112
BARG157
BTRP166

Functional Information from PROSITE/UniProt
site_idPS00813
Number of Residues24
DetailsIF4E Eukaryotic initiation factor 4E signature. DYslFKdgIePmWEDeknkrGGRW
ChainResidueDetails
AASP90-TRP113

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues28
DetailsRegion: {"description":"EIF4EBP1/2/3 binding","evidences":[{"source":"PubMed","id":"10394359","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues16
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"10394359","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"9200613","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

238895

PDB entries from 2025-07-16

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