6YJV
Crystal structure of unliganded MGAT5 (alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase V) luminal domain with a Lys329-Ile345 loop truncation, in complex with UDP-2-deoxy-2-fluoroglucose and biantennary pentasaccharide M592
This is a non-PDB format compatible entry.
Functional Information from GO Data
Chain | GOid | namespace | contents |
AAA | 0006487 | biological_process | protein N-linked glycosylation |
AAA | 0030144 | molecular_function | alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity |
BBB | 0006487 | biological_process | protein N-linked glycosylation |
BBB | 0030144 | molecular_function | alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 4 |
Details | BINDING: BINDING => ECO:0000269|PubMed:30140003 |
Chain | Residue | Details |
AAA | TYR378 | |
AAA | ALA554 | |
BBB | TYR378 | |
BBB | ALA554 |
site_id | SWS_FT_FI2 |
Number of Residues | 2 |
Details | BINDING: BINDING => ECO:0000305|PubMed:30140003 |
Chain | Residue | Details |
AAA | PHE526 | |
BBB | PHE526 |
site_id | SWS_FT_FI3 |
Number of Residues | 4 |
Details | CARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000255 |
Chain | Residue | Details |
AAA | GLU334 | |
AAA | LYS447 | |
BBB | GLU334 | |
BBB | LYS447 |
site_id | SWS_FT_FI4 |
Number of Residues | 2 |
Details | CARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:30140003, ECO:0007744|PDB:5ZIB |
Chain | Residue | Details |
AAA | GLN433 | |
BBB | GLN433 |