6XUB
Structure of coproheme decarboxylase from Corynebacterium diphteriae in complex with monovinyl monopropionyl deuteroheme
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0006783 | biological_process | heme biosynthetic process |
A | 0006785 | biological_process | heme B biosynthetic process |
A | 0016491 | molecular_function | oxidoreductase activity |
A | 0016634 | molecular_function | oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor |
A | 0020037 | molecular_function | heme binding |
A | 0046872 | molecular_function | metal ion binding |
B | 0006783 | biological_process | heme biosynthetic process |
B | 0006785 | biological_process | heme B biosynthetic process |
B | 0016491 | molecular_function | oxidoreductase activity |
B | 0016634 | molecular_function | oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor |
B | 0020037 | molecular_function | heme binding |
B | 0046872 | molecular_function | metal ion binding |
C | 0006783 | biological_process | heme biosynthetic process |
C | 0006785 | biological_process | heme B biosynthetic process |
C | 0016491 | molecular_function | oxidoreductase activity |
C | 0016634 | molecular_function | oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor |
C | 0020037 | molecular_function | heme binding |
C | 0046872 | molecular_function | metal ion binding |
D | 0006783 | biological_process | heme biosynthetic process |
D | 0006785 | biological_process | heme B biosynthetic process |
D | 0016491 | molecular_function | oxidoreductase activity |
D | 0016634 | molecular_function | oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor |
D | 0020037 | molecular_function | heme binding |
D | 0046872 | molecular_function | metal ion binding |
E | 0006783 | biological_process | heme biosynthetic process |
E | 0006785 | biological_process | heme B biosynthetic process |
E | 0016491 | molecular_function | oxidoreductase activity |
E | 0016634 | molecular_function | oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor |
E | 0020037 | molecular_function | heme binding |
E | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 24 |
Details | binding site for residue VOV A 301 |
Chain | Residue |
A | ALA112 |
A | HIS158 |
A | ALA162 |
A | VAL168 |
A | TRP183 |
A | LEU185 |
A | PHE187 |
A | LEU198 |
A | MET199 |
A | MET202 |
A | ARG208 |
A | GLU113 |
A | HOH404 |
A | HOH407 |
A | HOH417 |
A | HOH462 |
A | HOH538 |
A | PHE114 |
A | ASN115 |
A | HIS118 |
A | TYR135 |
A | PHE137 |
A | ARG139 |
A | TRP143 |
site_id | AC2 |
Number of Residues | 24 |
Details | binding site for residue VOV B 401 |
Chain | Residue |
B | ALA112 |
B | GLU113 |
B | PHE114 |
B | ASN115 |
B | HIS118 |
B | TYR135 |
B | PHE137 |
B | ARG139 |
B | TRP143 |
B | HIS158 |
B | ALA162 |
B | VAL168 |
B | TRP183 |
B | LEU185 |
B | PHE187 |
B | LEU198 |
B | MET202 |
B | ARG208 |
B | HOH501 |
B | HOH507 |
B | HOH514 |
B | HOH526 |
B | HOH541 |
B | HOH567 |
site_id | AC3 |
Number of Residues | 22 |
Details | binding site for residue VOV C 501 |
Chain | Residue |
C | ALA112 |
C | GLU113 |
C | PHE114 |
C | ASN115 |
C | HIS118 |
C | TYR135 |
C | PHE137 |
C | ARG139 |
C | TRP143 |
C | HIS158 |
C | ALA162 |
C | TRP183 |
C | LEU185 |
C | PHE187 |
C | MET199 |
C | MET202 |
C | ARG208 |
C | HOH602 |
C | HOH613 |
C | HOH627 |
C | HOH643 |
C | HOH652 |
site_id | AC4 |
Number of Residues | 24 |
Details | binding site for residue VOV D 301 |
Chain | Residue |
D | ALA112 |
D | GLU113 |
D | PHE114 |
D | ASN115 |
D | HIS118 |
D | TYR135 |
D | PHE137 |
D | ARG139 |
D | TRP143 |
D | HIS158 |
D | ALA162 |
D | ARG163 |
D | VAL168 |
D | TRP183 |
D | LEU185 |
D | PHE187 |
D | MET199 |
D | MET202 |
D | ARG208 |
D | HOH403 |
D | HOH426 |
D | HOH428 |
D | HOH441 |
D | HOH473 |
site_id | AC5 |
Number of Residues | 23 |
Details | binding site for residue VOV E 401 |
Chain | Residue |
E | TYR135 |
E | PHE137 |
E | ARG139 |
E | TRP143 |
E | HIS158 |
E | ALA162 |
E | THR172 |
E | TRP183 |
E | LEU185 |
E | PHE187 |
E | LEU198 |
E | MET199 |
E | MET202 |
E | ARG208 |
E | HOH502 |
E | HOH508 |
E | HOH555 |
E | HOH558 |
E | ALA112 |
E | GLU113 |
E | PHE114 |
E | ASN115 |
E | HIS118 |