6XPW
Nucleoside Diphosphate Kinase from Aspergillus fumgiatus Af293 bound to CDP
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0004550 | molecular_function | nucleoside diphosphate kinase activity |
| A | 0006183 | biological_process | GTP biosynthetic process |
| A | 0006228 | biological_process | UTP biosynthetic process |
| A | 0006241 | biological_process | CTP biosynthetic process |
| A | 0009142 | biological_process | nucleoside triphosphate biosynthetic process |
| B | 0004550 | molecular_function | nucleoside diphosphate kinase activity |
| B | 0006183 | biological_process | GTP biosynthetic process |
| B | 0006228 | biological_process | UTP biosynthetic process |
| B | 0006241 | biological_process | CTP biosynthetic process |
| B | 0009142 | biological_process | nucleoside triphosphate biosynthetic process |
| C | 0004550 | molecular_function | nucleoside diphosphate kinase activity |
| C | 0006183 | biological_process | GTP biosynthetic process |
| C | 0006228 | biological_process | UTP biosynthetic process |
| C | 0006241 | biological_process | CTP biosynthetic process |
| C | 0009142 | biological_process | nucleoside triphosphate biosynthetic process |
| E | 0004550 | molecular_function | nucleoside diphosphate kinase activity |
| E | 0006183 | biological_process | GTP biosynthetic process |
| E | 0006228 | biological_process | UTP biosynthetic process |
| E | 0006241 | biological_process | CTP biosynthetic process |
| E | 0009142 | biological_process | nucleoside triphosphate biosynthetic process |
| G | 0004550 | molecular_function | nucleoside diphosphate kinase activity |
| G | 0006183 | biological_process | GTP biosynthetic process |
| G | 0006228 | biological_process | UTP biosynthetic process |
| G | 0006241 | biological_process | CTP biosynthetic process |
| G | 0009142 | biological_process | nucleoside triphosphate biosynthetic process |
| H | 0004550 | molecular_function | nucleoside diphosphate kinase activity |
| H | 0006183 | biological_process | GTP biosynthetic process |
| H | 0006228 | biological_process | UTP biosynthetic process |
| H | 0006241 | biological_process | CTP biosynthetic process |
| H | 0009142 | biological_process | nucleoside triphosphate biosynthetic process |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 10 |
| Details | binding site for residue PO4 A 201 |
| Chain | Residue |
| A | LYS11 |
| A | HOH449 |
| A | THR93 |
| A | ASN114 |
| A | HIS117 |
| A | HOH302 |
| A | HOH307 |
| A | HOH312 |
| A | HOH393 |
| A | HOH425 |
| site_id | AC2 |
| Number of Residues | 16 |
| Details | binding site for residue CDP B 201 |
| Chain | Residue |
| B | LYS11 |
| B | TYR51 |
| B | PHE59 |
| B | LEU63 |
| B | ARG87 |
| B | THR93 |
| B | VAL111 |
| B | ASN114 |
| B | HIS117 |
| B | HOH303 |
| B | HOH317 |
| B | HOH343 |
| B | HOH397 |
| B | HOH398 |
| B | HOH434 |
| E | HOH352 |
| site_id | AC3 |
| Number of Residues | 8 |
| Details | binding site for residue PO4 C 201 |
| Chain | Residue |
| C | LYS11 |
| C | THR93 |
| C | ASN114 |
| C | HIS117 |
| C | HOH304 |
| C | HOH307 |
| C | HOH399 |
| C | HOH414 |
| site_id | AC4 |
| Number of Residues | 11 |
| Details | binding site for residue PO4 E 201 |
| Chain | Residue |
| E | LYS11 |
| E | THR93 |
| E | ARG104 |
| E | ASN114 |
| E | HIS117 |
| E | HOH301 |
| E | HOH302 |
| E | HOH303 |
| E | HOH346 |
| E | HOH369 |
| E | HOH447 |
| site_id | AC5 |
| Number of Residues | 12 |
| Details | binding site for residue PO4 G 201 |
| Chain | Residue |
| G | LYS11 |
| G | THR93 |
| G | ARG104 |
| G | ASN114 |
| G | HIS117 |
| G | HOH302 |
| G | HOH309 |
| G | HOH310 |
| G | HOH318 |
| G | HOH391 |
| G | HOH394 |
| G | HOH459 |
| site_id | AC6 |
| Number of Residues | 8 |
| Details | binding site for residue PO4 H 201 |
| Chain | Residue |
| C | HOH376 |
| H | LYS11 |
| H | THR93 |
| H | ASN114 |
| H | HIS117 |
| H | HOH305 |
| H | HOH306 |
| H | HOH344 |
Functional Information from PROSITE/UniProt
| site_id | PS00469 |
| Number of Residues | 9 |
| Details | NDPK Nucleoside diphosphate kinase (NDPK) active site signature. NvcHGSDSV |
| Chain | Residue | Details |
| A | ASN114-VAL122 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 6 |
| Details | Active site: {"description":"Pros-phosphohistidine intermediate","evidences":[{"evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 36 |
| Details | Binding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |






