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6XPV

Nucleoside Diphosphate Kinase from Aspergillus fumgiatus Af293 bound to dTDP

Functional Information from GO Data
ChainGOidnamespacecontents
A0004550molecular_functionnucleoside diphosphate kinase activity
A0006183biological_processGTP biosynthetic process
A0006228biological_processUTP biosynthetic process
A0006241biological_processCTP biosynthetic process
A0009142biological_processnucleoside triphosphate biosynthetic process
B0004550molecular_functionnucleoside diphosphate kinase activity
B0006183biological_processGTP biosynthetic process
B0006228biological_processUTP biosynthetic process
B0006241biological_processCTP biosynthetic process
B0009142biological_processnucleoside triphosphate biosynthetic process
C0004550molecular_functionnucleoside diphosphate kinase activity
C0006183biological_processGTP biosynthetic process
C0006228biological_processUTP biosynthetic process
C0006241biological_processCTP biosynthetic process
C0009142biological_processnucleoside triphosphate biosynthetic process
E0004550molecular_functionnucleoside diphosphate kinase activity
E0006183biological_processGTP biosynthetic process
E0006228biological_processUTP biosynthetic process
E0006241biological_processCTP biosynthetic process
E0009142biological_processnucleoside triphosphate biosynthetic process
G0004550molecular_functionnucleoside diphosphate kinase activity
G0006183biological_processGTP biosynthetic process
G0006228biological_processUTP biosynthetic process
G0006241biological_processCTP biosynthetic process
G0009142biological_processnucleoside triphosphate biosynthetic process
H0004550molecular_functionnucleoside diphosphate kinase activity
H0006183biological_processGTP biosynthetic process
H0006228biological_processUTP biosynthetic process
H0006241biological_processCTP biosynthetic process
H0009142biological_processnucleoside triphosphate biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues8
Detailsbinding site for residue TYD A 201
ChainResidue
ALYS11
APHE59
ALEU63
AARG87
ATHR93
AHOH313
AHOH337
AHOH368

site_idAC2
Number of Residues13
Detailsbinding site for residue TYD B 201
ChainResidue
BPHE59
BLEU63
BARG87
BTHR93
BHOH301
BHOH304
BHOH307
BHOH309
BHOH322
BHOH339
BHOH352
BHOH355
BLEU54

site_idAC3
Number of Residues12
Detailsbinding site for residue TYD C 201
ChainResidue
CLEU54
CPHE59
CLEU63
CARG87
CTHR93
CHOH302
CHOH305
CHOH307
CHOH309
CHOH311
CHOH335
CHOH353

site_idAC4
Number of Residues14
Detailsbinding site for residue TYD E 201
ChainResidue
ELYS11
ELEU54
EPHE59
EARG87
ETHR93
EHOH301
EHOH302
EHOH307
EHOH315
EHOH327
EHOH335
EHOH337
EHOH348
EHOH380

site_idAC5
Number of Residues15
Detailsbinding site for residue TYD G 201
ChainResidue
GLYS11
GTYR51
GLEU54
GPHE59
GLEU63
GARG87
GTHR93
GHOH304
GHOH307
GHOH315
GHOH320
GHOH321
GHOH331
GHOH355
GHOH389

site_idAC6
Number of Residues13
Detailsbinding site for residue TYD H 201
ChainResidue
GHOH312
HLEU54
HPHE59
HLEU63
HARG87
HTHR93
HVAL111
HHOH301
HHOH305
HHOH306
HHOH317
HHOH324
HHOH354

Functional Information from PROSITE/UniProt
site_idPS00469
Number of Residues9
DetailsNDPK Nucleoside diphosphate kinase (NDPK) active site signature. NvcHGSDSV
ChainResidueDetails
AASN114-VAL122

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsActive site: {"description":"Pros-phosphohistidine intermediate","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues36
DetailsBinding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

255239

PDB entries from 2026-06-17

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