6XPV
Nucleoside Diphosphate Kinase from Aspergillus fumgiatus Af293 bound to dTDP
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0004550 | molecular_function | nucleoside diphosphate kinase activity |
| A | 0006183 | biological_process | GTP biosynthetic process |
| A | 0006228 | biological_process | UTP biosynthetic process |
| A | 0006241 | biological_process | CTP biosynthetic process |
| A | 0009142 | biological_process | nucleoside triphosphate biosynthetic process |
| B | 0004550 | molecular_function | nucleoside diphosphate kinase activity |
| B | 0006183 | biological_process | GTP biosynthetic process |
| B | 0006228 | biological_process | UTP biosynthetic process |
| B | 0006241 | biological_process | CTP biosynthetic process |
| B | 0009142 | biological_process | nucleoside triphosphate biosynthetic process |
| C | 0004550 | molecular_function | nucleoside diphosphate kinase activity |
| C | 0006183 | biological_process | GTP biosynthetic process |
| C | 0006228 | biological_process | UTP biosynthetic process |
| C | 0006241 | biological_process | CTP biosynthetic process |
| C | 0009142 | biological_process | nucleoside triphosphate biosynthetic process |
| E | 0004550 | molecular_function | nucleoside diphosphate kinase activity |
| E | 0006183 | biological_process | GTP biosynthetic process |
| E | 0006228 | biological_process | UTP biosynthetic process |
| E | 0006241 | biological_process | CTP biosynthetic process |
| E | 0009142 | biological_process | nucleoside triphosphate biosynthetic process |
| G | 0004550 | molecular_function | nucleoside diphosphate kinase activity |
| G | 0006183 | biological_process | GTP biosynthetic process |
| G | 0006228 | biological_process | UTP biosynthetic process |
| G | 0006241 | biological_process | CTP biosynthetic process |
| G | 0009142 | biological_process | nucleoside triphosphate biosynthetic process |
| H | 0004550 | molecular_function | nucleoside diphosphate kinase activity |
| H | 0006183 | biological_process | GTP biosynthetic process |
| H | 0006228 | biological_process | UTP biosynthetic process |
| H | 0006241 | biological_process | CTP biosynthetic process |
| H | 0009142 | biological_process | nucleoside triphosphate biosynthetic process |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 8 |
| Details | binding site for residue TYD A 201 |
| Chain | Residue |
| A | LYS11 |
| A | PHE59 |
| A | LEU63 |
| A | ARG87 |
| A | THR93 |
| A | HOH313 |
| A | HOH337 |
| A | HOH368 |
| site_id | AC2 |
| Number of Residues | 13 |
| Details | binding site for residue TYD B 201 |
| Chain | Residue |
| B | PHE59 |
| B | LEU63 |
| B | ARG87 |
| B | THR93 |
| B | HOH301 |
| B | HOH304 |
| B | HOH307 |
| B | HOH309 |
| B | HOH322 |
| B | HOH339 |
| B | HOH352 |
| B | HOH355 |
| B | LEU54 |
| site_id | AC3 |
| Number of Residues | 12 |
| Details | binding site for residue TYD C 201 |
| Chain | Residue |
| C | LEU54 |
| C | PHE59 |
| C | LEU63 |
| C | ARG87 |
| C | THR93 |
| C | HOH302 |
| C | HOH305 |
| C | HOH307 |
| C | HOH309 |
| C | HOH311 |
| C | HOH335 |
| C | HOH353 |
| site_id | AC4 |
| Number of Residues | 14 |
| Details | binding site for residue TYD E 201 |
| Chain | Residue |
| E | LYS11 |
| E | LEU54 |
| E | PHE59 |
| E | ARG87 |
| E | THR93 |
| E | HOH301 |
| E | HOH302 |
| E | HOH307 |
| E | HOH315 |
| E | HOH327 |
| E | HOH335 |
| E | HOH337 |
| E | HOH348 |
| E | HOH380 |
| site_id | AC5 |
| Number of Residues | 15 |
| Details | binding site for residue TYD G 201 |
| Chain | Residue |
| G | LYS11 |
| G | TYR51 |
| G | LEU54 |
| G | PHE59 |
| G | LEU63 |
| G | ARG87 |
| G | THR93 |
| G | HOH304 |
| G | HOH307 |
| G | HOH315 |
| G | HOH320 |
| G | HOH321 |
| G | HOH331 |
| G | HOH355 |
| G | HOH389 |
| site_id | AC6 |
| Number of Residues | 13 |
| Details | binding site for residue TYD H 201 |
| Chain | Residue |
| G | HOH312 |
| H | LEU54 |
| H | PHE59 |
| H | LEU63 |
| H | ARG87 |
| H | THR93 |
| H | VAL111 |
| H | HOH301 |
| H | HOH305 |
| H | HOH306 |
| H | HOH317 |
| H | HOH324 |
| H | HOH354 |
Functional Information from PROSITE/UniProt
| site_id | PS00469 |
| Number of Residues | 9 |
| Details | NDPK Nucleoside diphosphate kinase (NDPK) active site signature. NvcHGSDSV |
| Chain | Residue | Details |
| A | ASN114-VAL122 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 6 |
| Details | Active site: {"description":"Pros-phosphohistidine intermediate","evidences":[{"evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 36 |
| Details | Binding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |






