Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0004550 | molecular_function | nucleoside diphosphate kinase activity |
A | 0005524 | molecular_function | ATP binding |
A | 0006183 | biological_process | GTP biosynthetic process |
A | 0006228 | biological_process | UTP biosynthetic process |
A | 0006241 | biological_process | CTP biosynthetic process |
A | 0009117 | biological_process | nucleotide metabolic process |
A | 0016301 | molecular_function | kinase activity |
A | 0046872 | molecular_function | metal ion binding |
B | 0004550 | molecular_function | nucleoside diphosphate kinase activity |
B | 0005524 | molecular_function | ATP binding |
B | 0006183 | biological_process | GTP biosynthetic process |
B | 0006228 | biological_process | UTP biosynthetic process |
B | 0006241 | biological_process | CTP biosynthetic process |
B | 0009117 | biological_process | nucleotide metabolic process |
B | 0016301 | molecular_function | kinase activity |
B | 0046872 | molecular_function | metal ion binding |
C | 0004550 | molecular_function | nucleoside diphosphate kinase activity |
C | 0005524 | molecular_function | ATP binding |
C | 0006183 | biological_process | GTP biosynthetic process |
C | 0006228 | biological_process | UTP biosynthetic process |
C | 0006241 | biological_process | CTP biosynthetic process |
C | 0009117 | biological_process | nucleotide metabolic process |
C | 0016301 | molecular_function | kinase activity |
C | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 23 |
Details | binding site for residue GDP A 201 |
Chain | Residue |
A | LYS11 |
A | MG202 |
A | HOH305 |
A | HOH321 |
A | HOH327 |
A | HOH328 |
A | HOH331 |
A | HOH340 |
A | HOH349 |
A | HOH352 |
A | HOH369 |
A | TYR51 |
A | HOH375 |
A | HOH382 |
A | HOH406 |
C | GLU151 |
A | LEU54 |
A | PHE59 |
A | LEU63 |
A | ARG87 |
A | THR93 |
A | VAL111 |
A | ASN114 |
site_id | AC2 |
Number of Residues | 5 |
Details | binding site for residue MG A 202 |
Chain | Residue |
A | GDP201 |
A | HOH349 |
A | HOH369 |
A | HOH382 |
A | HOH388 |
site_id | AC3 |
Number of Residues | 23 |
Details | binding site for residue GDP B 201 |
Chain | Residue |
A | GLU151 |
B | LYS11 |
B | TYR51 |
B | LEU54 |
B | PHE59 |
B | LEU63 |
B | ARG87 |
B | THR93 |
B | VAL111 |
B | ASN114 |
B | MG202 |
B | HOH307 |
B | HOH309 |
B | HOH315 |
B | HOH316 |
B | HOH325 |
B | HOH329 |
B | HOH345 |
B | HOH350 |
B | HOH352 |
B | HOH376 |
B | HOH378 |
B | HOH417 |
site_id | AC4 |
Number of Residues | 6 |
Details | binding site for residue MG B 202 |
Chain | Residue |
B | GDP201 |
B | HOH304 |
B | HOH325 |
B | HOH352 |
B | HOH395 |
B | HOH457 |
site_id | AC5 |
Number of Residues | 21 |
Details | binding site for residue GDP C 201 |
Chain | Residue |
B | GLU151 |
C | LYS11 |
C | TYR51 |
C | LEU54 |
C | PHE59 |
C | LEU63 |
C | ARG87 |
C | THR93 |
C | VAL111 |
C | ASN114 |
C | MG202 |
C | HOH302 |
C | HOH313 |
C | HOH323 |
C | HOH344 |
C | HOH348 |
C | HOH361 |
C | HOH364 |
C | HOH368 |
C | HOH408 |
C | HOH450 |
site_id | AC6 |
Number of Residues | 6 |
Details | binding site for residue MG C 202 |
Chain | Residue |
C | GDP201 |
C | HOH305 |
C | HOH335 |
C | HOH361 |
C | HOH368 |
C | HOH475 |
Functional Information from PROSITE/UniProt
site_id | PS00469 |
Number of Residues | 9 |
Details | NDPK Nucleoside diphosphate kinase (NDPK) active site signature. NvcHGSDSV |
Chain | Residue | Details |
A | ASN114-VAL122 | |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 3 |
Details | ACT_SITE: Pros-phosphohistidine intermediate => ECO:0000250 |
Chain | Residue | Details |
A | HIS117 | |
B | HIS117 | |
C | HIS117 | |
site_id | SWS_FT_FI2 |
Number of Residues | 18 |
Details | BINDING: BINDING => ECO:0000250 |
Chain | Residue | Details |
A | LYS11 | |
B | THR93 | |
B | ARG104 | |
B | ASN114 | |
C | LYS11 | |
C | PHE59 | |
C | ARG87 | |
C | THR93 | |
C | ARG104 | |
C | ASN114 | |
A | PHE59 | |
A | ARG87 | |
A | THR93 | |
A | ARG104 | |
A | ASN114 | |
B | LYS11 | |
B | PHE59 | |
B | ARG87 | |