6XP7
Nucleoside Diphosphate Kinase from Aspergillus fumgiatus Af293 bound to ADP
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0004550 | molecular_function | nucleoside diphosphate kinase activity |
A | 0005524 | molecular_function | ATP binding |
A | 0006183 | biological_process | GTP biosynthetic process |
A | 0006228 | biological_process | UTP biosynthetic process |
A | 0006241 | biological_process | CTP biosynthetic process |
A | 0009117 | biological_process | nucleotide metabolic process |
A | 0009142 | biological_process | nucleoside triphosphate biosynthetic process |
A | 0016301 | molecular_function | kinase activity |
A | 0046872 | molecular_function | metal ion binding |
B | 0004550 | molecular_function | nucleoside diphosphate kinase activity |
B | 0005524 | molecular_function | ATP binding |
B | 0006183 | biological_process | GTP biosynthetic process |
B | 0006228 | biological_process | UTP biosynthetic process |
B | 0006241 | biological_process | CTP biosynthetic process |
B | 0009117 | biological_process | nucleotide metabolic process |
B | 0009142 | biological_process | nucleoside triphosphate biosynthetic process |
B | 0016301 | molecular_function | kinase activity |
B | 0046872 | molecular_function | metal ion binding |
C | 0004550 | molecular_function | nucleoside diphosphate kinase activity |
C | 0005524 | molecular_function | ATP binding |
C | 0006183 | biological_process | GTP biosynthetic process |
C | 0006228 | biological_process | UTP biosynthetic process |
C | 0006241 | biological_process | CTP biosynthetic process |
C | 0009117 | biological_process | nucleotide metabolic process |
C | 0009142 | biological_process | nucleoside triphosphate biosynthetic process |
C | 0016301 | molecular_function | kinase activity |
C | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 20 |
Details | binding site for residue ADP A 201 |
Chain | Residue |
A | LYS11 |
A | HOH306 |
A | HOH307 |
A | HOH308 |
A | HOH313 |
A | HOH326 |
A | HOH332 |
A | HOH353 |
A | HOH373 |
A | HOH379 |
A | HOH412 |
A | TYR51 |
C | GLU151 |
A | LEU54 |
A | PHE59 |
A | LEU63 |
A | ARG87 |
A | THR93 |
A | VAL111 |
A | ASN114 |
site_id | AC2 |
Number of Residues | 20 |
Details | binding site for residue ADP B 201 |
Chain | Residue |
A | GLU151 |
B | LYS11 |
B | TYR51 |
B | LEU54 |
B | PHE59 |
B | LEU63 |
B | ARG87 |
B | THR93 |
B | VAL111 |
B | ASN114 |
B | HOH303 |
B | HOH313 |
B | HOH316 |
B | HOH317 |
B | HOH329 |
B | HOH332 |
B | HOH334 |
B | HOH362 |
B | HOH370 |
B | HOH420 |
site_id | AC3 |
Number of Residues | 18 |
Details | binding site for residue ADP C 201 |
Chain | Residue |
B | GLU151 |
C | LYS11 |
C | TYR51 |
C | LEU54 |
C | PHE59 |
C | LEU63 |
C | ARG87 |
C | THR93 |
C | VAL111 |
C | GLY112 |
C | ASN114 |
C | HOH306 |
C | HOH319 |
C | HOH322 |
C | HOH328 |
C | HOH330 |
C | HOH350 |
C | HOH414 |
Functional Information from PROSITE/UniProt
site_id | PS00469 |
Number of Residues | 9 |
Details | NDPK Nucleoside diphosphate kinase (NDPK) active site signature. NvcHGSDSV |
Chain | Residue | Details |
A | ASN114-VAL122 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 3 |
Details | ACT_SITE: Pros-phosphohistidine intermediate => ECO:0000250 |
Chain | Residue | Details |
B | HIS117 | |
C | HIS117 | |
A | HIS117 |
site_id | SWS_FT_FI2 |
Number of Residues | 18 |
Details | BINDING: BINDING => ECO:0000250 |
Chain | Residue | Details |
B | LYS11 | |
B | PHE59 | |
B | ARG87 | |
B | THR93 | |
B | ARG104 | |
B | ASN114 | |
C | LYS11 | |
C | PHE59 | |
C | ARG87 | |
C | THR93 | |
C | ARG104 | |
C | ASN114 | |
A | LYS11 | |
A | PHE59 | |
A | ARG87 | |
A | THR93 | |
A | ARG104 | |
A | ASN114 |