6XOB
CryoEM structure of Eastern Equine Encephalitis (EEEV) VLP with Fab EEEV-143.
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0004252 | molecular_function | serine-type endopeptidase activity |
| A | 0019028 | cellular_component | viral capsid |
| A | 0055036 | cellular_component | virion membrane |
| B | 0005198 | molecular_function | structural molecule activity |
| B | 0019028 | cellular_component | viral capsid |
| C | 0004252 | molecular_function | serine-type endopeptidase activity |
| C | 0006508 | biological_process | proteolysis |
| D | 0004252 | molecular_function | serine-type endopeptidase activity |
| D | 0019028 | cellular_component | viral capsid |
| D | 0055036 | cellular_component | virion membrane |
| E | 0005198 | molecular_function | structural molecule activity |
| E | 0019028 | cellular_component | viral capsid |
| F | 0004252 | molecular_function | serine-type endopeptidase activity |
| F | 0006508 | biological_process | proteolysis |
| G | 0004252 | molecular_function | serine-type endopeptidase activity |
| G | 0019028 | cellular_component | viral capsid |
| G | 0055036 | cellular_component | virion membrane |
| H | 0005198 | molecular_function | structural molecule activity |
| H | 0019028 | cellular_component | viral capsid |
| I | 0004252 | molecular_function | serine-type endopeptidase activity |
| I | 0006508 | biological_process | proteolysis |
| J | 0004252 | molecular_function | serine-type endopeptidase activity |
| J | 0019028 | cellular_component | viral capsid |
| J | 0055036 | cellular_component | virion membrane |
| K | 0005198 | molecular_function | structural molecule activity |
| K | 0019028 | cellular_component | viral capsid |
| L | 0004252 | molecular_function | serine-type endopeptidase activity |
| L | 0006508 | biological_process | proteolysis |
Functional Information from PROSITE/UniProt
| site_id | PS00290 |
| Number of Residues | 7 |
| Details | IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YACEVTH |
| Chain | Residue | Details |
| N | TYR191-HIS197 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 1452 |
| Details | TOPO_DOM: Extracellular => ECO:0000255 |
| Chain | Residue | Details |
| B | ASP1-THR364 | |
| L | HIS138 | |
| L | ASP160 | |
| L | SER212 | |
| E | ASP1-THR364 | |
| H | ASP1-THR364 | |
| K | ASP1-THR364 | |
| F | ASP160 | |
| F | SER212 | |
| I | HIS138 | |
| I | ASP160 | |
| I | SER212 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 80 |
| Details | TRANSMEM: Helical => ECO:0000255 |
| Chain | Residue | Details |
| B | ILE365-LEU385 | |
| E | ILE365-LEU385 | |
| H | ILE365-LEU385 | |
| K | ILE365-LEU385 | |
| I | TYR186 | |
| I | ASN219 | |
| L | TYR186 | |
| L | ASN219 |
| site_id | SWS_FT_FI3 |
| Number of Residues | 136 |
| Details | TOPO_DOM: Cytoplasmic => ECO:0000255 |
| Chain | Residue | Details |
| B | LEU386-ALA420 | |
| E | LEU386-ALA420 | |
| H | LEU386-ALA420 | |
| K | LEU386-ALA420 |
| site_id | SWS_FT_FI4 |
| Number of Residues | 4 |
| Details | SITE: Cleavage; by host signal peptidase => ECO:0000250 |
| Chain | Residue | Details |
| B | ALA420 | |
| E | ALA420 | |
| H | ALA420 | |
| K | ALA420 |
| site_id | SWS_FT_FI5 |
| Number of Residues | 12 |
| Details | LIPID: S-palmitoyl cysteine; by host => ECO:0000250 |
| Chain | Residue | Details |
| B | CYS393 | |
| K | CYS393 | |
| K | CYS413 | |
| K | CYS414 | |
| B | CYS413 | |
| B | CYS414 | |
| E | CYS393 | |
| E | CYS413 | |
| E | CYS414 | |
| H | CYS393 | |
| H | CYS413 | |
| H | CYS414 |
