Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6XLR

The 1.23 Angstrom crystal structure of galactose oxidase variant with genetically incorporated Cl2-Tyr272

Functional Information from GO Data
ChainGOidnamespacecontents
A0005576cellular_componentextracellular region
A0016491molecular_functionoxidoreductase activity
A0045480molecular_functiongalactose oxidase activity
A0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues7
Detailsbinding site for residue CU A 1001
ChainResidue
APHE227
ACYS228
A2LT272
ATYR495
AHIS496
AHIS581
AHOH1202

site_idAC2
Number of Residues6
Detailsbinding site for residue CA A 1002
ChainResidue
AASN34
ATHR37
AALA141
AGLU142
ALYS29
AASP32

site_idAC3
Number of Residues9
Detailsbinding site for residue ACT A 1003
ChainResidue
AARG371
AALA378
ATHR398
APHE399
AGLY400
AASN413
AALA414
AHIS415
AHOH1294

site_idAC4
Number of Residues9
Detailsbinding site for residue ACT A 1004
ChainResidue
ALEU184
ATHR204
ASER206
AARG217
ATYR253
AASP258
ATRP260
AHOH1112
AHOH1146

site_idAC5
Number of Residues8
Detailsbinding site for residue ACT A 1005
ChainResidue
ATRP340
AVAL392
ALYS393
AGLY394
ALEU419
AGLY420
AHOH1159
AHOH1261

site_idAC6
Number of Residues4
Detailsbinding site for residue ACT A 1006
ChainResidue
AARG84
ATHR130
AGLU131
AALA132

site_idAC7
Number of Residues9
Detailsbinding site for residue GOL A 1007
ChainResidue
APRO591
ALEU592
ATHR593
AGLN605
APRO607
AHOH1109
AHOH1193
AHOH1324
AHOH1546

site_idAC8
Number of Residues6
Detailsbinding site for residue GOL A 1008
ChainResidue
AGLY157
ALEU158
AGLY159
AARG160
AASN531
ATYR534

site_idAC9
Number of Residues8
Detailsbinding site for residue GOL A 1009
ChainResidue
ATYR484
AGLN486
AASN531
AHOH1122
AHOH1246
AHOH1284
AHOH1308
AHOH1401

site_idAD1
Number of Residues8
Detailsbinding site for residue GOL A 1010
ChainResidue
APHE295
AGLU296
AASN298
APRO313
AHOH1213
AHOH1319
AHOH1491
AHOH1629

site_idAD2
Number of Residues4
Detailsbinding site for residue GOL A 1011
ChainResidue
ATYR88
AVAL127
AHOH1117
AHOH1156

site_idAD3
Number of Residues8
Detailsbinding site for residue GOL A 1012
ChainResidue
AGLY162
APRO163
AARG506
AILE527
ATHR529
AHOH1126
AHOH1189
AHOH1715

site_idAD4
Number of Residues9
Detailsbinding site for residue GOL A 1013
ChainResidue
AALA1
AASP108
ATHR110
ATHR111
ALYS112
AASN191
AASP192
APHE523
AHOH1622

site_idAD5
Number of Residues9
Detailsbinding site for residue GOL A 1014
ChainResidue
ATYR436
ATYR484
ALYS485
AHOH1178
AHOH1183
ALEU158
AASN314
AGLY363
AASP364

site_idAD6
Number of Residues4
Detailsbinding site for residue GOL A 1015
ChainResidue
ATYR358
AASP364
ALYS485
AHOH1632

site_idAD7
Number of Residues7
Detailsbinding site for residue GOL A 1016
ChainResidue
APRO469
AVAL470
APHE471
ATHR472
AHOH1170
AHOH1501
AHOH1562

site_idAD8
Number of Residues9
Detailsbinding site for residue GOL A 1017
ChainResidue
AGLU195
AALA323
AASP324
ALYS325
ACYS515
AGLY516
AASP517
AHOH1172
AHOH1704

site_idAD9
Number of Residues2
Detailsbinding site for residue GOL A 1018
ChainResidue
ATHR179
AHOH1125

Functional Information from PROSITE/UniProt
site_idPS00018
Number of Residues13
DetailsEF_HAND_1 EF-hand calcium-binding domain. DGNQNGWIGrhEV
ChainResidueDetails
AASP75-VAL87

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: Proton acceptor => ECO:0000269|DOI:10.1007/s007750050139
ChainResidueDetails
ATYR495

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING:
ChainResidueDetails
A2LT272
ATYR495
AHIS496
AHIS581

site_idSWS_FT_FI3
Number of Residues2
DetailsCROSSLNK: 3'-(S-cysteinyl)-tyrosine (Cys-Tyr)
ChainResidueDetails
ACYS228
A2LT272

Catalytic Information from CSA
site_idMCSA1
Number of Residues6
DetailsM-CSA 322
ChainResidueDetails
ACYS228activator, covalently attached, metal ligand
A2LT272activator, hydrogen radical acceptor, hydrogen radical donor, metal ligand
ATRP290activator, radical stabiliser
ATYR495activator, metal ligand, proton acceptor, proton donor
AHIS496metal ligand
AHIS581metal ligand

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon