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6XHN

Covalent complex of SARS-CoV main protease with 4-methoxy-N-[(2S)-4-methyl-1-oxo-1-({(2S)-3-oxo-1-[(3S)-2-oxopyrrolidin-3-yl]butan-2-yl}amino)pentan-2-yl]-1H-indole-2-carboxamide

Functional Information from GO Data
ChainGOidnamespacecontents
A0008233molecular_functionpeptidase activity
A0019082biological_processviral protein processing
B0008233molecular_functionpeptidase activity
B0019082biological_processviral protein processing
Functional Information from PDB Data
site_idAC1
Number of Residues15
Detailsbinding site for residue V3D A 9001
ChainResidue
AHIS41
AGLU166
AHIS172
AGLN189
ATHR190
AALA191
AHOH9172
APHE140
AASN142
AGLY143
ASER144
ACYS145
AHIS163
AHIS164
AMET165

site_idAC2
Number of Residues10
Detailsbinding site for residue EDO A 9002
ChainResidue
ALYS5
AALA7
AVAL125
ATYR126
AGLN127
AHOH9103
AHOH9123
BLYS5
BALA7
BVAL125

site_idAC3
Number of Residues18
Detailsbinding site for Di-peptide V3D B 9001 and CYS B 145
ChainResidue
BLEU27
BASN28
BHIS41
BPHE140
BASN142
BGLY143
BSER144
BGLY146
BSER147
BHIS163
BHIS164
BMET165
BGLU166
BHIS172
BGLN189
BTHR190
BALA191
BHOH9155

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsActive site: {"description":"For 3CL-PRO activity","evidences":[{"source":"PROSITE-ProRule","id":"PRU00772","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"16306590","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues2
DetailsActive site: {"description":"For 3CL-PRO activity","evidences":[{"source":"PROSITE-ProRule","id":"PRU00772","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

247947

PDB entries from 2026-01-21

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