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6XBO

X-ray crystal structure of the mouse CMP-Sialic acid transporter in complex with 5-methyl CMP

Functional Information from GO Data
ChainGOidnamespacecontents
A0000139cellular_componentGolgi membrane
A0005456molecular_functionCMP-N-acetylneuraminate transmembrane transporter activity
A0005794cellular_componentGolgi apparatus
A0006055biological_processCMP-N-acetylneuraminate biosynthetic process
A0015165molecular_functionpyrimidine nucleotide-sugar transmembrane transporter activity
A0015297molecular_functionantiporter activity
A0015782biological_processCMP-N-acetylneuraminate transmembrane transport
A0016020cellular_componentmembrane
A0090481biological_processpyrimidine nucleotide-sugar transmembrane transport
Functional Information from PDB Data
site_idAC1
Number of Residues20
Detailsbinding site for residue 5MC A 401
ChainResidue
ALYS55
AMET213
ATYR214
AGLY257
ATHR260
ASER261
ALYS272
AHOH526
AHOH531
AHOH545
AHOH591
ATYR98
AHOH599
AGLN101
AASN102
ATYR121
ALYS124
ASER188
APHE195
AASN210

site_idAC2
Number of Residues6
Detailsbinding site for residue OLC A 402
ChainResidue
AGLY237
APHE238
AILE295
ALEU297
AOLC407
AHOH503

site_idAC3
Number of Residues5
Detailsbinding site for residue OLC A 403
ChainResidue
AASN103
AMET104
ASER228
AOLC410
AHOH519

site_idAC4
Number of Residues5
Detailsbinding site for residue OLC A 404
ChainResidue
ALEU17
AMET271
APHE274
ASER275
ALEU282

site_idAC5
Number of Residues5
Detailsbinding site for residue OLC A 405
ChainResidue
AALA89
ALYS90
ASER92
ALEU96
ATYR194

site_idAC6
Number of Residues3
Detailsbinding site for residue OLC A 406
ChainResidue
ATHR156
ATRP160
ATYR226

site_idAC7
Number of Residues4
Detailsbinding site for residue OLC A 407
ChainResidue
APHE239
AGLN294
AILE295
AOLC402

site_idAC8
Number of Residues4
Detailsbinding site for residue OLC A 408
ChainResidue
APRO85
ALYS86
ASER92
ATYR311

site_idAC9
Number of Residues4
Detailsbinding site for residue OLC A 409
ChainResidue
AVAL169
AASN173
ALEU175
ALEU176

site_idAD1
Number of Residues5
Detailsbinding site for residue OLC A 410
ChainResidue
AMET104
ALEU176
AILE183
AOLC403
AHOH584

site_idAD2
Number of Residues3
Detailsbinding site for residue OLC A 411
ChainResidue
ALEU134
AMET135
AOLC412

site_idAD3
Number of Residues2
Detailsbinding site for residue OLC A 412
ChainResidue
ALYS197
AOLC411

site_idAD4
Number of Residues1
Detailsbinding site for residue OLC A 413
ChainResidue
AILE310

site_idAD5
Number of Residues3
Detailsbinding site for residue OLC A 414
ChainResidue
ALYS74
AVAL81
AHOH573

site_idAD6
Number of Residues6
Detailsbinding site for residue 2PE A 415
ChainResidue
AALA75
ALEU199
ASER202
ATHR204
ALYS265
ATYR266

site_idAD7
Number of Residues3
Detailsbinding site for residue 2PE A 416
ChainResidue
ALEU70
ALYS74
ATYR245

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsTOPO_DOM: Cytoplasmic => ECO:0000269|PubMed:10085119, ECO:0000269|PubMed:30985278
ChainResidueDetails
AMET1-SER9

site_idSWS_FT_FI2
Number of Residues188
DetailsTRANSMEM: Helical => ECO:0000269|PubMed:30985278
ChainResidueDetails
ALEU10-ALA30
ALEU297-LEU315
ATHR46-ALA64
ALEU88-ALA108
AALA115-MET135
ALYS142-TRP160
ALEU176-GLU196
AASN210-SER228
ATYR244-VAL262
AILE270-VAL288

site_idSWS_FT_FI3
Number of Residues54
DetailsTOPO_DOM: Lumenal => ECO:0000269|PubMed:30985278
ChainResidueDetails
ALEU31-THR45
ALEU109-ALA114
ALYS161-LEU175
AASP229-THR243
ALEU289-THR296

site_idSWS_FT_FI4
Number of Residues45
DetailsTOPO_DOM: Cytoplasmic => ECO:0000269|PubMed:30985278
ChainResidueDetails
ALYS65-GLU87
ALEU136-SER141
ALYS197-ARG209
AVAL263-ASN269

site_idSWS_FT_FI5
Number of Residues6
DetailsBINDING: BINDING => ECO:0000269|PubMed:30985278, ECO:0007744|PDB:6OH2, ECO:0007744|PDB:6OH3
ChainResidueDetails
ALYS55
AGLN101
ATYR117
ASER188
AASN210
ALYS272

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PDB entries from 2024-11-06

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