6X8S

Crystal structure of 3D11 Fab in complex with Plasmodium berghei circumsporozoite protein NAND peptide

Functional Information from PDB Data

site_id	AC1
Number of Residues	2
Details	binding site for residue EDO H 301

Chain	Residue
H	TYR32
P	PRO4

---

site_id	AC2
Number of Residues	5
Details	binding site for residue EDO H 302

Chain	Residue
H	SER7
H	GLU10
H	LYS19
H	SER21
H	HOH407

---

site_id	AC3
Number of Residues	8
Details	binding site for residue EDO H 303

Chain	Residue
H	TYR27
H	THR28
H	PHE29
H	SER76
H	HOH430
H	HOH525
H	ALA24
H	SER25

---

site_id	AC4
Number of Residues	5
Details	binding site for residue EDO H 304

Chain	Residue
H	SER161
H	GLY162
H	VAL163
H	HIS164
H	HOH488

---

site_id	AC5
Number of Residues	9
Details	binding site for residue EDO H 305

Chain	Residue
H	LEU141
H	VAL169
H	SER177
H	LEU178
H	SER179
H	HOH415
H	HOH480
L	THR178
L	HOH457

---

site_id	AC6
Number of Residues	5
Details	binding site for residue EDO H 306

Chain	Residue
H	SER161
H	GLN171
H	SER172
H	HOH564
L	GLN160

---

site_id	AC7
Number of Residues	6
Details	binding site for residue EDO H 307

Chain	Residue
H	PRO52
H	ASN54
H	GLY55
L	ASP1
L	SER26
L	GLN27

---

site_id	AC8
Number of Residues	5
Details	binding site for residue EDO H 308

Chain	Residue
H	GLN105
H	GLY106
H	PRO149
H	HOH428
H	HOH530

---

site_id	AC9
Number of Residues	4
Details	binding site for residue EDO H 309

Chain	Residue
H	LYS19
H	THR70
H	TYR79
H	HOH408

---

site_id	AD1
Number of Residues	7
Details	binding site for residue EDO H 310

Chain	Residue
H	GLY162
H	LEU170
H	GLN171
H	GLY174
H	THR183
H	HOH429
H	HOH537

---

site_id	AD2
Number of Residues	5
Details	binding site for residue EDO H 311

Chain	Residue
H	GLY44
H	LEU45
H	HOH404
L	PHE98
L	GLY99

---

site_id	AD3
Number of Residues	5
Details	binding site for residue EDO H 312

Chain	Residue
H	LYS38
H	GLU46
H	LYS62
H	GLU85
H	SER128

---

site_id	AD4
Number of Residues	7
Details	binding site for residue EDO L 301

Chain	Residue
H	ASN155
H	GLN192
H	THR193
L	ARG142
L	VAL163
L	HOH423
L	HOH443

---

site_id	AD5
Number of Residues	3
Details	binding site for residue EDO L 302

Chain	Residue
L	LEU9
L	GLY100
L	GLY101

---

site_id	AD6
Number of Residues	4
Details	binding site for residue EDO L 303

Chain	Residue
L	ARG108
L	THR109
L	THR109
L	HOH473

---

site_id	AD7
Number of Residues	6
Details	binding site for residue EDO L 304

Chain	Residue
H	LYS19
H	GLN81
L	LEU27
L	TYR27
L	SER27
L	HOH416

---

site_id	AD8
Number of Residues	5
Details	binding site for residue EDO L 305

Chain	Residue
H	PHE59
H	THR68
H	LEU69
H	HOH465
L	HOH442

---

site_id	AD9
Number of Residues	6
Details	binding site for residue EDO L 306

Chain	Residue
L	LYS30
L	THR31
L	LEU50
L	HOH440
L	HOH453
L	HOH499

---

site_id	AE1
Number of Residues	6
Details	binding site for residue EDO L 307

Chain	Residue
L	LYS45
L	PHE62
L	GLU81
L	ASP82
L	LEU37
L	ARG39

---

site_id	AE2
Number of Residues	2
Details	binding site for residue EDO L 308

Chain	Residue
L	SER67
L	ASP70

---

site_id	AE3
Number of Residues	5
Details	binding site for residue EDO L 309

Chain	Residue
L	GLY16
L	VAL110
L	ALA111
L	ALA112
L	GLY200

---

site_id	AE4
Number of Residues	6
Details	binding site for residue EDO L 310

Chain	Residue
L	THR197
L	HIS198
L	LEU201
L	SER203
L	PRO204
L	HOH506

---

site_id	AE5
Number of Residues	6
Details	binding site for residue EDO L 311

Chain	Residue
L	ALA112
L	SER114
L	ASN137
L	ASN138
L	EDO312
L	HOH417

---

site_id	AE6
Number of Residues	4
Details	binding site for residue EDO L 312

Chain	Residue
L	ARG108
L	ALA111
L	ASP170
L	EDO311

---

site_id	AE7
Number of Residues	5
Details	binding site for residue EDO L 313

Chain	Residue
H	SER132
L	PRO113
L	SER114
L	VAL115
L	HOH409

---

site_id	AE8
Number of Residues	4
Details	binding site for residue EDO L 314

Chain	Residue
L	SER52
L	GLU53
L	LEU54
L	HOH407

---

site_id	AE9
Number of Residues	8
Details	binding site for residue EDO P 101

Chain	Residue
L	ARG46
L	LEU54
L	ASP55
L	HOH422
P	PRO2
P	PRO3
P	PRO4
P	ASN5

---

Functional Information from PROSITE/UniProt

site_id	PS00290
Number of Residues	7
Details	IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YICNVNH

Chain	Residue	Details
H	TYR194-HIS200
L	TYR192-HIS198

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	7
Details	Repeat: {"description":"1-5","evidences":[{"source":"PubMed","id":"33253113","evidenceCode":"ECO:0000305"}]}

Chain

Residue

Details

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