6X89Functional Information from GO Data
| Chain | GOid | namespace | contents |
| 1M | 0016020 | cellular_component | membrane |
| 2M | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
| 2M | 0042773 | biological_process | ATP synthesis coupled electron transport |
| 3M | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
| 3M | 0016651 | molecular_function | oxidoreductase activity, acting on NAD(P)H |
| 4L | 0016651 | molecular_function | oxidoreductase activity, acting on NAD(P)H |
| 4L | 0042773 | biological_process | ATP synthesis coupled electron transport |
| 6M | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
| A1 | 0005743 | cellular_component | mitochondrial inner membrane |
| A2 | 0005743 | cellular_component | mitochondrial inner membrane |
| A5 | 0005743 | cellular_component | mitochondrial inner membrane |
| A5 | 0022904 | biological_process | respiratory electron transport chain |
| A6 | 0005743 | cellular_component | mitochondrial inner membrane |
| A6 | 0006979 | biological_process | response to oxidative stress |
| A6 | 0045271 | cellular_component | respiratory chain complex I |
| A8 | 0005739 | cellular_component | mitochondrion |
| A8 | 0006120 | biological_process | mitochondrial electron transport, NADH to ubiquinone |
| A8 | 0045271 | cellular_component | respiratory chain complex I |
| A9 | 0005739 | cellular_component | mitochondrion |
| A9 | 0044877 | molecular_function | protein-containing complex binding |
| AL | 0005743 | cellular_component | mitochondrial inner membrane |
| AL | 0006979 | biological_process | response to oxidative stress |
| AL | 0016020 | cellular_component | membrane |
| AL | 0045271 | cellular_component | respiratory chain complex I |
| AM | 0005739 | cellular_component | mitochondrion |
| AM | 0005743 | cellular_component | mitochondrial inner membrane |
| AM | 0016020 | cellular_component | membrane |
| AM | 0045271 | cellular_component | respiratory chain complex I |
| G1 | 0009853 | biological_process | photorespiration |
| G1 | 0031966 | cellular_component | mitochondrial membrane |
| G1 | 0045271 | cellular_component | respiratory chain complex I |
| G2 | 0009853 | biological_process | photorespiration |
| G2 | 0031966 | cellular_component | mitochondrial membrane |
| G2 | 0045271 | cellular_component | respiratory chain complex I |
| L2 | 0009853 | biological_process | photorespiration |
| L2 | 0031966 | cellular_component | mitochondrial membrane |
| L2 | 0045271 | cellular_component | respiratory chain complex I |
| S1 | 0005743 | cellular_component | mitochondrial inner membrane |
| S1 | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
| S1 | 0016020 | cellular_component | membrane |
| S1 | 0016491 | molecular_function | oxidoreductase activity |
| S1 | 0016651 | molecular_function | oxidoreductase activity, acting on NAD(P)H |
| S1 | 0042773 | biological_process | ATP synthesis coupled electron transport |
| S1 | 0051536 | molecular_function | iron-sulfur cluster binding |
| S1 | 1902600 | biological_process | proton transmembrane transport |
| S2 | 0016651 | molecular_function | oxidoreductase activity, acting on NAD(P)H |
| S2 | 0048038 | molecular_function | quinone binding |
| S2 | 0051287 | molecular_function | NAD binding |
| S3 | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
| S3 | 0016651 | molecular_function | oxidoreductase activity, acting on NAD(P)H |
| S4 | 0005743 | cellular_component | mitochondrial inner membrane |
| S4 | 0022900 | biological_process | electron transport chain |
| S5 | 0003676 | molecular_function | nucleic acid binding |
| S5 | 0003723 | molecular_function | RNA binding |
| S5 | 0003729 | molecular_function | mRNA binding |
| S5 | 0005634 | cellular_component | nucleus |
| S5 | 0005654 | cellular_component | nucleoplasm |
| S5 | 0005737 | cellular_component | cytoplasm |
| S5 | 0016607 | cellular_component | nuclear speck |
| S6 | 0005739 | cellular_component | mitochondrion |
| S6 | 0006120 | biological_process | mitochondrial electron transport, NADH to ubiquinone |
| S7 | 0005739 | cellular_component | mitochondrion |
| S7 | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
| S7 | 0009060 | biological_process | aerobic respiration |
| S7 | 0015990 | biological_process | electron transport coupled proton transport |
| S7 | 0032981 | biological_process | mitochondrial respiratory chain complex I assembly |
| S7 | 0045271 | cellular_component | respiratory chain complex I |
| S7 | 0048038 | molecular_function | quinone binding |
| S7 | 0051536 | molecular_function | iron-sulfur cluster binding |
| S7 | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
| S8 | 0003954 | molecular_function | NADH dehydrogenase activity |
| S8 | 0005739 | cellular_component | mitochondrion |
| S8 | 0006120 | biological_process | mitochondrial electron transport, NADH to ubiquinone |
| S8 | 0009060 | biological_process | aerobic respiration |
| S8 | 0016020 | cellular_component | membrane |
| S8 | 0016651 | molecular_function | oxidoreductase activity, acting on NAD(P)H |
| S8 | 0032981 | biological_process | mitochondrial respiratory chain complex I assembly |
| S8 | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
| V1 | 0005739 | cellular_component | mitochondrion |
| V1 | 0005743 | cellular_component | mitochondrial inner membrane |
| V1 | 0006120 | biological_process | mitochondrial electron transport, NADH to ubiquinone |
| V1 | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
| V1 | 0010181 | molecular_function | FMN binding |
| V1 | 0045271 | cellular_component | respiratory chain complex I |
| V1 | 0051287 | molecular_function | NAD binding |
| V1 | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
| V1 | 1902600 | biological_process | proton transmembrane transport |
| V2 | 0003954 | molecular_function | NADH dehydrogenase activity |
| V2 | 0005739 | cellular_component | mitochondrion |
| V2 | 0006120 | biological_process | mitochondrial electron transport, NADH to ubiquinone |
| V2 | 0016491 | molecular_function | oxidoreductase activity |
| V2 | 0045271 | cellular_component | respiratory chain complex I |
| X1 | 0005739 | cellular_component | mitochondrion |
| X1 | 0031966 | cellular_component | mitochondrial membrane |
| X1 | 0045271 | cellular_component | respiratory chain complex I |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 18 |
| Details | binding site for residue NAP A9 401 |
| Chain | Residue |
| A9 | THR71 |
| A9 | TYR148 |
| A9 | MET157 |
| A9 | VAL177 |
| A9 | SER178 |
| A9 | CYS179 |
| A9 | LYS194 |
| A9 | ALA214 |
| A9 | ARG222 |
| S7 | LYS213 |
| A9 | GLY72 |
| A9 | PHE73 |
| A9 | LEU74 |
| A9 | ARG94 |
| A9 | LEU138 |
| A9 | ILE139 |
| A9 | GLY140 |
| A9 | ARG141 |
| site_id | AC2 |
| Number of Residues | 4 |
| Details | binding site for residue PC1 AL 401 |
| Chain | Residue |
| AL | ARG31 |
| S7 | LEU70 |
| S7 | TRP73 |
| S7 | ARG76 |
| site_id | AC3 |
| Number of Residues | 8 |
| Details | binding site for residue SF4 S1 801 |
| Chain | Residue |
| S1 | HIS167 |
| S1 | CYS171 |
| S1 | CYS174 |
| S1 | GLY177 |
| S1 | CYS180 |
| S1 | VAL271 |
| S1 | GLY272 |
| S2 | ILE310 |
| site_id | AC4 |
| Number of Residues | 10 |
| Details | binding site for residue SF4 S1 802 |
| Chain | Residue |
| S1 | ARG218 |
| S1 | CYS219 |
| S1 | ILE220 |
| S1 | GLN221 |
| S1 | CYS222 |
| S1 | CYS225 |
| S1 | CYS269 |
| S1 | PRO270 |
| S1 | VAL271 |
| S1 | ALA273 |
| site_id | AC5 |
| Number of Residues | 7 |
| Details | binding site for residue FES S1 803 |
| Chain | Residue |
| S1 | CYS107 |
| S1 | TYR108 |
| S1 | GLY116 |
| S1 | CYS118 |
| S1 | ARG119 |
| S1 | CYS121 |
| S1 | CYS135 |
| site_id | AC6 |
| Number of Residues | 11 |
| Details | binding site for residue PC1 S2 401 |
| Chain | Residue |
| 1M | MET189 |
| 1M | ILE192 |
| 1M | VAL283 |
| 1M | TYR290 |
| 1M | LEU298 |
| 1M | VAL302 |
| S2 | ARG197 |
| S2 | GLN201 |
| S8 | THR70 |
| S8 | LEU71 |
| S8 | PHE72 |
| site_id | AC7 |
| Number of Residues | 5 |
| Details | binding site for residue ZN S6 300 |
| Chain | Residue |
| S6 | CYS65 |
| S6 | HIS75 |
| S6 | CYS90 |
| S6 | TYR92 |
| S6 | CYS93 |
| site_id | AC8 |
| Number of Residues | 9 |
| Details | binding site for residue SF4 S7 301 |
| Chain | Residue |
| S2 | ARG69 |
| S7 | ALA87 |
| S7 | CYS88 |
| S7 | CYS89 |
| S7 | GLY124 |
| S7 | THR125 |
| S7 | CYS153 |
| S7 | TYR160 |
| S7 | CYS183 |
| site_id | AC9 |
| Number of Residues | 10 |
| Details | binding site for residue SF4 S8 301 |
| Chain | Residue |
| S8 | HIS111 |
| S8 | CYS133 |
| S8 | PRO134 |
| S8 | ILE138 |
| S8 | CYS162 |
| S8 | ILE163 |
| S8 | CYS165 |
| S8 | PHE167 |
| S8 | CYS168 |
| S8 | GLU179 |
| site_id | AD1 |
| Number of Residues | 9 |
| Details | binding site for residue SF4 S8 302 |
| Chain | Residue |
| S8 | CYS123 |
| S8 | ILE124 |
| S8 | ALA125 |
| S8 | CYS126 |
| S8 | LYS127 |
| S8 | CYS129 |
| S8 | CYS172 |
| S8 | ALA176 |
| S8 | ILE177 |
| site_id | AD2 |
| Number of Residues | 11 |
| Details | binding site for residue SF4 V1 500 |
| Chain | Residue |
| V1 | ILE452 |
| V1 | CYS453 |
| V1 | LEU455 |
| V1 | ILE233 |
| V1 | PRO251 |
| V1 | SER406 |
| V1 | CYS407 |
| V1 | GLY408 |
| V1 | CYS410 |
| V1 | CYS413 |
| V1 | THR451 |
| site_id | AD3 |
| Number of Residues | 15 |
| Details | binding site for residue FMN V1 501 |
| Chain | Residue |
| V1 | GLY115 |
| V1 | ARG116 |
| V1 | GLY117 |
| V1 | LYS126 |
| V1 | ASN144 |
| V1 | ASP146 |
| V1 | GLU147 |
| V1 | SER148 |
| V1 | TYR232 |
| V1 | GLY235 |
| V1 | GLU236 |
| V1 | THR271 |
| V1 | ASN272 |
| V1 | ALA454 |
| V1 | LEU455 |
| site_id | AD4 |
| Number of Residues | 6 |
| Details | binding site for residue FES V2 300 |
| Chain | Residue |
| V2 | CYS126 |
| V2 | THR128 |
| V2 | CYS131 |
| V2 | CYS167 |
| V2 | GLY169 |
| V2 | CYS171 |
| site_id | AD5 |
| Number of Residues | 6 |
| Details | binding site for residue PC1 A1 101 |
| Chain | Residue |
| 1M | PHE46 |
| A1 | ASN2 |
| A1 | LEU3 |
| A1 | ARG4 |
| A1 | MET6 |
| AL | ILE43 |
| site_id | AD6 |
| Number of Residues | 8 |
| Details | binding site for residue PC1 C2 101 |
| Chain | Residue |
| C2 | HIS31 |
| C2 | TRP33 |
| C2 | GLU34 |
| G1 | ARG24 |
| G1 | ARG28 |
| G1 | PC1701 |
| G1 | PC1702 |
| L2 | TYR238 |
| site_id | AD7 |
| Number of Residues | 8 |
| Details | binding site for residue PC1 G1 701 |
| Chain | Residue |
| C2 | PC1101 |
| G1 | LEU25 |
| G1 | ARG28 |
| G1 | TYR33 |
| G1 | PC1702 |
| P2 | ALA88 |
| X1 | TYR49 |
| X1 | ILE53 |
| site_id | AD8 |
| Number of Residues | 8 |
| Details | binding site for residue PC1 G1 702 |
| Chain | Residue |
| 2M | TRP45 |
| C2 | PC1101 |
| G1 | GLN36 |
| G1 | PC1701 |
| G2 | LYS229 |
| G2 | LYS233 |
| X1 | LEU50 |
| X1 | LYS54 |
| site_id | AD9 |
| Number of Residues | 4 |
| Details | binding site for residue ZN G1 703 |
| Chain | Residue |
| G1 | HIS130 |
| G1 | TYR207 |
| G2 | HIS107 |
| G2 | HIS135 |
Functional Information from PROSITE/UniProt
| site_id | PS00198 |
| Number of Residues | 12 |
| Details | 4FE4S_FER_1 4Fe-4S ferredoxin-type iron-sulfur binding region signature. CiACKlCEaICP |
| Chain | Residue | Details |
| S8 | CYS123-PRO134 | |
| S8 | CYS162-PRO173 |
| site_id | PS00535 |
| Number of Residues | 12 |
| Details | COMPLEX1_49K Respiratory chain NADH dehydrogenase 49 Kd subunit signature. LHRGtEKLiEyK |
| Chain | Residue | Details |
| S2 | LEU47-LYS58 |
| site_id | PS00542 |
| Number of Residues | 22 |
| Details | COMPLEX1_30K Respiratory chain NADH dehydrogenase 30 Kd subunit signature. EREvwDMFgvssinHpdlRrIL |
| Chain | Residue | Details |
| S3 | GLU112-LEU133 |
| site_id | PS00641 |
| Number of Residues | 18 |
| Details | COMPLEX1_75K_1 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. PrfCYhsrlsiaGnCRmC |
| Chain | Residue | Details |
| S1 | PRO104-CYS121 |
| site_id | PS00642 |
| Number of Residues | 13 |
| Details | COMPLEX1_75K_2 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. CPiCDqGGeCdLQ |
| Chain | Residue | Details |
| S1 | CYS171-GLN183 |
| site_id | PS00643 |
| Number of Residues | 11 |
| Details | COMPLEX1_75K_3 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. RCIqCtRCVrF |
| Chain | Residue | Details |
| S1 | ARG218-PHE228 |
| site_id | PS00644 |
| Number of Residues | 16 |
| Details | COMPLEX1_51K_1 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. GAGAYICGEETALLES |
| Chain | Residue | Details |
| V1 | GLY228-SER243 |
| site_id | PS00645 |
| Number of Residues | 12 |
| Details | COMPLEX1_51K_2 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. ESCGqCtPCReG |
| Chain | Residue | Details |
| V1 | GLU405-GLY416 |
| site_id | PS00667 |
| Number of Residues | 16 |
| Details | COMPLEX1_ND1_1 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. GLLQpLaDGLKLIlKE |
| Chain | Residue | Details |
| 1M | GLY47-GLU62 |
| site_id | PS00668 |
| Number of Residues | 14 |
| Details | COMPLEX1_ND1_2 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. PFDLPEAEa.ESvaG |
| Chain | Residue | Details |
| 1M | PRO202-GLY215 |
| site_id | PS01099 |
| Number of Residues | 19 |
| Details | COMPLEX1_24K Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. DglFSvgemeCMGcCvnAP |
| Chain | Residue | Details |
| V2 | ASP157-PRO175 |
| site_id | PS01150 |
| Number of Residues | 17 |
| Details | COMPLEX1_20K Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. GcDRIVPVDIYvPgCPP |
| Chain | Residue | Details |
| S7 | GLY169-PRO185 |
