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6WYA

RTX (Reverse Transcription Xenopolymerase) in complex with a DNA duplex and dAMPNPP

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0003676molecular_functionnucleic acid binding
A0003677molecular_functionDNA binding
A0003887molecular_functionDNA-directed DNA polymerase activity
A0006260biological_processDNA replication
A0016740molecular_functiontransferase activity
A0016779molecular_functionnucleotidyltransferase activity
A0034061molecular_functionDNA polymerase activity
A0046872molecular_functionmetal ion binding
A0071897biological_processDNA biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues7
Detailsbinding site for residue MG A 801
ChainResidue
AASP404
AASP542
ADZ4805
AHOH904
AHOH983
CDT20
CHOH113

site_idAC2
Number of Residues5
Detailsbinding site for residue MG A 802
ChainResidue
AHOH983
AHOH992
AHOH994
AASP404
ADZ4805

site_idAC3
Number of Residues7
Detailsbinding site for residue MG A 803
ChainResidue
AASP141
AMG804
AHOH917
AHOH955
AHOH1064
AHOH1123
AHOH1126

site_idAC4
Number of Residues6
Detailsbinding site for residue MG A 804
ChainResidue
AASP141
AGLU143
ATYR311
AASP315
AMG803
AHOH1123

site_idAC5
Number of Residues16
Detailsbinding site for residue DZ4 A 805
ChainResidue
ASER407
ALEU408
ATYR409
AARG460
ALYS464
ALYS487
AASN491
AASP542
AMG801
AMG802
AHOH911
AHOH983
AHOH1040
BDT3
BDA4
CDT20

site_idAC6
Number of Residues7
Detailsbinding site for residue TRS A 806
ChainResidue
AASP4
ATHR5
AASP6
AGLU251
ASER340
AASP343
AHOH1015

site_idAC7
Number of Residues4
Detailsbinding site for residue EDO A 807
ChainResidue
AARG585
AASP598
AGLU599
ALYS632

site_idAC8
Number of Residues6
Detailsbinding site for residue ACT A 808
ChainResidue
AASN568
ALEU571
APRO572
AGLY573
ALEU575
AHOH943

site_idAC9
Number of Residues6
Detailsbinding site for residue MG B 101
ChainResidue
BDA4
BDG5
BHOH207
BHOH208
BHOH214
CHOH108

site_idAD1
Number of Residues5
Detailsbinding site for residue EDO B 102
ChainResidue
AVAL589
AARG743
AARG746
AALA747
BDT9

Functional Information from PROSITE/UniProt
site_idPS00116
Number of Residues9
DetailsDNA_POLYMERASE_B DNA polymerase family B signature. YSDTDGFFA
ChainResidueDetails
ATYR538-ALA546

246031

PDB entries from 2025-12-10

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