6WVF
E.coli DsbB C104S with ubiquinone
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0005515 | molecular_function | protein binding |
A | 0005886 | cellular_component | plasma membrane |
A | 0006091 | biological_process | generation of precursor metabolites and energy |
A | 0006457 | biological_process | protein folding |
A | 0008218 | biological_process | bioluminescence |
A | 0009055 | molecular_function | electron transfer activity |
A | 0009408 | biological_process | response to heat |
A | 0015035 | molecular_function | protein-disulfide reductase activity |
A | 0016020 | cellular_component | membrane |
A | 0016491 | molecular_function | oxidoreductase activity |
A | 0016672 | molecular_function | oxidoreductase activity, acting on a sulfur group of donors, quinone or similar compound as acceptor |
A | 0048039 | molecular_function | ubiquinone binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 10 |
Details | binding site for residue UQ1 A 501 |
Chain | Residue |
A | ALA168 |
A | PHE289 |
A | PHE171 |
A | LEU177 |
A | PRO179 |
A | CYS183 |
A | GLU186 |
A | ARG187 |
A | LEU190 |
A | LEU285 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 1 |
Details | MOD_RES: (Z)-2,3-didehydrotyrosine => ECO:0000269|PubMed:8448132 |
Chain | Residue | Details |
A | VAL68 |
site_id | SWS_FT_FI2 |
Number of Residues | 2 |
Details | CROSSLNK: 5-imidazolinone (Ser-Gly) => ECO:0000269|PubMed:8448132 |
Chain | Residue | Details |
A | CRO66 | |
A | GLN69 |
site_id | SWS_FT_FI3 |
Number of Residues | 66 |
Details | TRANSMEM: Helical => ECO:0000305 |
Chain | Residue | Details |
A | TRP154-TRP170 | |
A | ALA189-PRO204 | |
A | VAL211-TYR228 | |
A | TRP284-SER302 |
site_id | SWS_FT_FI4 |
Number of Residues | 71 |
Details | TOPO_DOM: Periplasmic => ECO:0000305 |
Chain | Residue | Details |
A | PHE171-VAL188 | |
A | GLU229-GLN283 |
site_id | SWS_FT_FI5 |
Number of Residues | 5 |
Details | TOPO_DOM: Cytoplasmic => ECO:0000305 |
Chain | Residue | Details |
A | LYS205-TYR210 |
Catalytic Information from CSA
site_id | MCSA1 |
Number of Residues | 5 |
Details | M-CSA 734 |
Chain | Residue | Details |
A | CYS180 | electrofuge, electrophile, nucleofuge, nucleophile |
A | CYS183 | electrofuge, electrophile, nucleofuge, nucleophile |
A | ARG187 | electrostatic stabiliser |
A | SER243 | covalently attached, nucleofuge, nucleophile |
A | CYS269 | electrofuge, electrophile, nucleophile |