Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

6WOO

CryoEM structure of yeast 80S ribosome with Met-tRNAiMet, eIF5B, and GDP

This is a non-PDB format compatible entry.

Functional Information from GO Data

Chain	GOid	namespace	contents
1	0003924	molecular_function	GTPase activity
1	0005525	molecular_function	GTP binding
a	0002181	biological_process	cytoplasmic translation
a	0003723	molecular_function	RNA binding
a	0003735	molecular_function	structural constituent of ribosome
a	0005634	cellular_component	nucleus
a	0005737	cellular_component	cytoplasm
a	0005829	cellular_component	cytosol
a	0005840	cellular_component	ribosome
a	0006412	biological_process	translation
a	0015934	cellular_component	large ribosomal subunit
a	0022625	cellular_component	cytosolic large ribosomal subunit
a	0043232	cellular_component	intracellular non-membrane-bounded organelle
a	1990904	cellular_component	ribonucleoprotein complex
A	0002181	biological_process	cytoplasmic translation
A	0003723	molecular_function	RNA binding
A	0003735	molecular_function	structural constituent of ribosome
A	0005737	cellular_component	cytoplasm
A	0005829	cellular_component	cytosol
A	0005840	cellular_component	ribosome
A	0006412	biological_process	translation
A	0019843	molecular_function	rRNA binding
A	0022625	cellular_component	cytosolic large ribosomal subunit
A	0022626	cellular_component	cytosolic ribosome
A	0042273	biological_process	ribosomal large subunit biogenesis
A	1990145	biological_process	maintenance of translational fidelity
A	1990904	cellular_component	ribonucleoprotein complex
aa	0003735	molecular_function	structural constituent of ribosome
aa	0005840	cellular_component	ribosome
aa	0006412	biological_process	translation
AA	0003735	molecular_function	structural constituent of ribosome
AA	0005840	cellular_component	ribosome
AA	0006412	biological_process	translation
AA	0015935	cellular_component	small ribosomal subunit
b	0002181	biological_process	cytoplasmic translation
b	0003735	molecular_function	structural constituent of ribosome
b	0005737	cellular_component	cytoplasm
b	0005829	cellular_component	cytosol
b	0005840	cellular_component	ribosome
b	0006412	biological_process	translation
b	0022625	cellular_component	cytosolic large ribosomal subunit
b	1990904	cellular_component	ribonucleoprotein complex
B	0000027	biological_process	ribosomal large subunit assembly
B	0002181	biological_process	cytoplasmic translation
B	0003723	molecular_function	RNA binding
B	0003735	molecular_function	structural constituent of ribosome
B	0005515	molecular_function	protein binding
B	0005737	cellular_component	cytoplasm
B	0005829	cellular_component	cytosol
B	0005840	cellular_component	ribosome
B	0006364	biological_process	rRNA processing
B	0006412	biological_process	translation
B	0006414	biological_process	translational elongation
B	0022625	cellular_component	cytosolic large ribosomal subunit
B	1990145	biological_process	maintenance of translational fidelity
B	1990904	cellular_component	ribonucleoprotein complex
bb	0000028	biological_process	ribosomal small subunit assembly
bb	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
bb	0003723	molecular_function	RNA binding
bb	0003735	molecular_function	structural constituent of ribosome
bb	0005737	cellular_component	cytoplasm
bb	0005829	cellular_component	cytosol
bb	0005840	cellular_component	ribosome
bb	0006412	biological_process	translation
bb	0008270	molecular_function	zinc ion binding
bb	0022627	cellular_component	cytosolic small ribosomal subunit
bb	0044391	cellular_component	ribosomal subunit
bb	0046872	molecular_function	metal ion binding
bb	1990904	cellular_component	ribonucleoprotein complex
BB	0003735	molecular_function	structural constituent of ribosome
BB	0005840	cellular_component	ribosome
BB	0006412	biological_process	translation
c	0002181	biological_process	cytoplasmic translation
c	0003723	molecular_function	RNA binding
c	0003735	molecular_function	structural constituent of ribosome
c	0005737	cellular_component	cytoplasm
c	0005829	cellular_component	cytosol
c	0005840	cellular_component	ribosome
c	0006364	biological_process	rRNA processing
c	0022625	cellular_component	cytosolic large ribosomal subunit
c	0030627	molecular_function	pre-mRNA 5'-splice site binding
c	0048025	biological_process	negative regulation of mRNA splicing, via spliceosome
c	1990904	cellular_component	ribonucleoprotein complex
C	0002181	biological_process	cytoplasmic translation
C	0003723	molecular_function	RNA binding
C	0003735	molecular_function	structural constituent of ribosome
C	0005634	cellular_component	nucleus
C	0005737	cellular_component	cytoplasm
C	0005829	cellular_component	cytosol
C	0005840	cellular_component	ribosome
C	0006412	biological_process	translation
C	0022625	cellular_component	cytosolic large ribosomal subunit
C	1990904	cellular_component	ribonucleoprotein complex
cc	0000028	biological_process	ribosomal small subunit assembly
cc	0000054	biological_process	ribosomal subunit export from nucleus
cc	0003735	molecular_function	structural constituent of ribosome
cc	0005737	cellular_component	cytoplasm
cc	0005829	cellular_component	cytosol
cc	0005840	cellular_component	ribosome
cc	0006412	biological_process	translation
cc	0022627	cellular_component	cytosolic small ribosomal subunit
cc	0030490	biological_process	maturation of SSU-rRNA
cc	1900153	biological_process	positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
cc	1990904	cellular_component	ribonucleoprotein complex
CC	0003723	molecular_function	RNA binding
CC	0003735	molecular_function	structural constituent of ribosome
CC	0005840	cellular_component	ribosome
CC	0006412	biological_process	translation
CC	0015935	cellular_component	small ribosomal subunit
d	0002181	biological_process	cytoplasmic translation
d	0003735	molecular_function	structural constituent of ribosome
d	0005737	cellular_component	cytoplasm
d	0005829	cellular_component	cytosol
d	0005840	cellular_component	ribosome
d	0006412	biological_process	translation
d	0006450	biological_process	regulation of translational fidelity
d	0022625	cellular_component	cytosolic large ribosomal subunit
d	1990904	cellular_component	ribonucleoprotein complex
D	0000027	biological_process	ribosomal large subunit assembly
D	0002181	biological_process	cytoplasmic translation
D	0003735	molecular_function	structural constituent of ribosome
D	0005515	molecular_function	protein binding
D	0005634	cellular_component	nucleus
D	0005737	cellular_component	cytoplasm
D	0005829	cellular_component	cytosol
D	0005840	cellular_component	ribosome
D	0006412	biological_process	translation
D	0008097	molecular_function	5S rRNA binding
D	0019843	molecular_function	rRNA binding
D	0022625	cellular_component	cytosolic large ribosomal subunit
D	1990904	cellular_component	ribonucleoprotein complex
dd	0002181	biological_process	cytoplasmic translation
dd	0003735	molecular_function	structural constituent of ribosome
dd	0005737	cellular_component	cytoplasm
dd	0005829	cellular_component	cytosol
dd	0005840	cellular_component	ribosome
dd	0006412	biological_process	translation
dd	0008270	molecular_function	zinc ion binding
dd	0022627	cellular_component	cytosolic small ribosomal subunit
dd	0046872	molecular_function	metal ion binding
dd	1990904	cellular_component	ribonucleoprotein complex
DD	0000054	biological_process	ribosomal subunit export from nucleus
DD	0000056	biological_process	ribosomal small subunit export from nucleus
DD	0002181	biological_process	cytoplasmic translation
DD	0003723	molecular_function	RNA binding
DD	0003735	molecular_function	structural constituent of ribosome
DD	0003906	molecular_function	DNA-(apurinic or apyrimidinic site) endonuclease activity
DD	0005515	molecular_function	protein binding
DD	0005634	cellular_component	nucleus
DD	0005737	cellular_component	cytoplasm
DD	0005829	cellular_component	cytosol
DD	0005840	cellular_component	ribosome
DD	0006412	biological_process	translation
DD	0015935	cellular_component	small ribosomal subunit
DD	0022626	cellular_component	cytosolic ribosome
DD	0022627	cellular_component	cytosolic small ribosomal subunit
DD	0030686	cellular_component	90S preribosome
DD	0030688	cellular_component	preribosome, small subunit precursor
DD	0070651	biological_process	nonfunctional rRNA decay
DD	1990145	biological_process	maintenance of translational fidelity
DD	1990904	cellular_component	ribonucleoprotein complex
e	0002181	biological_process	cytoplasmic translation
e	0003735	molecular_function	structural constituent of ribosome
e	0005737	cellular_component	cytoplasm
e	0005829	cellular_component	cytosol
e	0005840	cellular_component	ribosome
e	0006412	biological_process	translation
e	0022625	cellular_component	cytosolic large ribosomal subunit
e	1990904	cellular_component	ribonucleoprotein complex
E	0000027	biological_process	ribosomal large subunit assembly
E	0002181	biological_process	cytoplasmic translation
E	0003723	molecular_function	RNA binding
E	0003735	molecular_function	structural constituent of ribosome
E	0005737	cellular_component	cytoplasm
E	0005829	cellular_component	cytosol
E	0005840	cellular_component	ribosome
E	0006412	biological_process	translation
E	0022625	cellular_component	cytosolic large ribosomal subunit
E	1990904	cellular_component	ribonucleoprotein complex
ee	0003735	molecular_function	structural constituent of ribosome
ee	0005840	cellular_component	ribosome
ee	0006412	biological_process	translation
EE	0002181	biological_process	cytoplasmic translation
EE	0003723	molecular_function	RNA binding
EE	0003735	molecular_function	structural constituent of ribosome
EE	0005737	cellular_component	cytoplasm
EE	0005829	cellular_component	cytosol
EE	0005840	cellular_component	ribosome
EE	0006412	biological_process	translation
EE	0019843	molecular_function	rRNA binding
EE	0022627	cellular_component	cytosolic small ribosomal subunit
EE	0030686	cellular_component	90S preribosome
EE	0032991	cellular_component	protein-containing complex
EE	0043229	cellular_component	intracellular organelle
EE	1990904	cellular_component	ribonucleoprotein complex
f	0000027	biological_process	ribosomal large subunit assembly
f	0002181	biological_process	cytoplasmic translation
f	0003735	molecular_function	structural constituent of ribosome
f	0005737	cellular_component	cytoplasm
f	0005829	cellular_component	cytosol
f	0005840	cellular_component	ribosome
f	0006364	biological_process	rRNA processing
f	0006412	biological_process	translation
f	0022625	cellular_component	cytosolic large ribosomal subunit
f	0042273	biological_process	ribosomal large subunit biogenesis
f	1990904	cellular_component	ribonucleoprotein complex
F	0000463	biological_process	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
F	0000470	biological_process	maturation of LSU-rRNA
F	0002181	biological_process	cytoplasmic translation
F	0003723	molecular_function	RNA binding
F	0003735	molecular_function	structural constituent of ribosome
F	0005737	cellular_component	cytoplasm
F	0005829	cellular_component	cytosol
F	0005840	cellular_component	ribosome
F	0022625	cellular_component	cytosolic large ribosomal subunit
F	0042273	biological_process	ribosomal large subunit biogenesis
F	1990904	cellular_component	ribonucleoprotein complex
ff	0003735	molecular_function	structural constituent of ribosome
ff	0005840	cellular_component	ribosome
ff	0006412	biological_process	translation
FF	0003723	molecular_function	RNA binding
FF	0003735	molecular_function	structural constituent of ribosome
FF	0005840	cellular_component	ribosome
FF	0006412	biological_process	translation
FF	0015935	cellular_component	small ribosomal subunit
FF	1990904	cellular_component	ribonucleoprotein complex
g	0002181	biological_process	cytoplasmic translation
g	0003735	molecular_function	structural constituent of ribosome
g	0005737	cellular_component	cytoplasm
g	0005829	cellular_component	cytosol
g	0005840	cellular_component	ribosome
g	0006412	biological_process	translation
g	0022625	cellular_component	cytosolic large ribosomal subunit
g	0030687	cellular_component	preribosome, large subunit precursor
g	0042254	biological_process	ribosome biogenesis
g	1990904	cellular_component	ribonucleoprotein complex
G	0000470	biological_process	maturation of LSU-rRNA
G	0002181	biological_process	cytoplasmic translation
G	0003723	molecular_function	RNA binding
G	0003735	molecular_function	structural constituent of ribosome
G	0005737	cellular_component	cytoplasm
G	0005829	cellular_component	cytosol
G	0005840	cellular_component	ribosome
G	0022625	cellular_component	cytosolic large ribosomal subunit
G	0042254	biological_process	ribosome biogenesis
G	1990904	cellular_component	ribonucleoprotein complex
gg	0001934	biological_process	positive regulation of protein phosphorylation
gg	0001965	molecular_function	G-protein alpha-subunit binding
gg	0002181	biological_process	cytoplasmic translation
gg	0005080	molecular_function	protein kinase C binding
gg	0005092	molecular_function	GDP-dissociation inhibitor activity
gg	0005634	cellular_component	nucleus
gg	0005737	cellular_component	cytoplasm
gg	0005829	cellular_component	cytosol
gg	0005840	cellular_component	ribosome
gg	0006521	biological_process	regulation of cellular amino acid metabolic process
gg	0007186	biological_process	G protein-coupled receptor signaling pathway
gg	0010629	biological_process	negative regulation of gene expression
gg	0017148	biological_process	negative regulation of translation
gg	0022627	cellular_component	cytosolic small ribosomal subunit
gg	0043022	molecular_function	ribosome binding
gg	0045182	molecular_function	translation regulator activity
gg	0061157	biological_process	mRNA destabilization
gg	0070651	biological_process	nonfunctional rRNA decay
gg	0072344	biological_process	rescue of stalled ribosome
gg	1902660	biological_process	negative regulation of glucose mediated signaling pathway
gg	1990116	biological_process	ribosome-associated ubiquitin-dependent protein catabolic process
gg	1990145	biological_process	maintenance of translational fidelity
gg	1990904	cellular_component	ribonucleoprotein complex
gg	2001125	biological_process	negative regulation of translational frameshifting
GG	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GG	0003735	molecular_function	structural constituent of ribosome
GG	0005634	cellular_component	nucleus
GG	0005654	cellular_component	nucleoplasm
GG	0005730	cellular_component	nucleolus
GG	0005737	cellular_component	cytoplasm
GG	0005829	cellular_component	cytosol
GG	0005840	cellular_component	ribosome
GG	0006364	biological_process	rRNA processing
GG	0006412	biological_process	translation
GG	0022627	cellular_component	cytosolic small ribosomal subunit
GG	0030686	cellular_component	90S preribosome
GG	0032040	cellular_component	small-subunit processome
GG	0042254	biological_process	ribosome biogenesis
GG	1990904	cellular_component	ribonucleoprotein complex
h	0000463	biological_process	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
h	0002181	biological_process	cytoplasmic translation
h	0003729	molecular_function	mRNA binding
h	0003735	molecular_function	structural constituent of ribosome
h	0005737	cellular_component	cytoplasm
h	0005829	cellular_component	cytosol
h	0005840	cellular_component	ribosome
h	0006412	biological_process	translation
h	0022625	cellular_component	cytosolic large ribosomal subunit
h	0030687	cellular_component	preribosome, large subunit precursor
h	1990904	cellular_component	ribonucleoprotein complex
H	0002181	biological_process	cytoplasmic translation
H	0003735	molecular_function	structural constituent of ribosome
H	0005737	cellular_component	cytoplasm
H	0005829	cellular_component	cytosol
H	0005840	cellular_component	ribosome
H	0006412	biological_process	translation
H	0019843	molecular_function	rRNA binding
H	0022625	cellular_component	cytosolic large ribosomal subunit
H	1990904	cellular_component	ribonucleoprotein complex
HH	0002181	biological_process	cytoplasmic translation
HH	0003735	molecular_function	structural constituent of ribosome
HH	0005634	cellular_component	nucleus
HH	0005654	cellular_component	nucleoplasm
HH	0005730	cellular_component	nucleolus
HH	0005737	cellular_component	cytoplasm
HH	0005829	cellular_component	cytosol
HH	0005840	cellular_component	ribosome
HH	0006364	biological_process	rRNA processing
HH	0006412	biological_process	translation
HH	0022627	cellular_component	cytosolic small ribosomal subunit
HH	0030686	cellular_component	90S preribosome
HH	0032040	cellular_component	small-subunit processome
HH	0042254	biological_process	ribosome biogenesis
HH	0042274	biological_process	ribosomal small subunit biogenesis
HH	1990904	cellular_component	ribonucleoprotein complex
i	0002181	biological_process	cytoplasmic translation
i	0003723	molecular_function	RNA binding
i	0003735	molecular_function	structural constituent of ribosome
i	0005737	cellular_component	cytoplasm
i	0005829	cellular_component	cytosol
i	0005840	cellular_component	ribosome
i	0006412	biological_process	translation
i	0022625	cellular_component	cytosolic large ribosomal subunit
i	1990904	cellular_component	ribonucleoprotein complex
I	0000027	biological_process	ribosomal large subunit assembly
I	0002181	biological_process	cytoplasmic translation
I	0003735	molecular_function	structural constituent of ribosome
I	0005515	molecular_function	protein binding
I	0005737	cellular_component	cytoplasm
I	0005829	cellular_component	cytosol
I	0005840	cellular_component	ribosome
I	0006412	biological_process	translation
I	0006415	biological_process	translational termination
I	0022625	cellular_component	cytosolic large ribosomal subunit
I	1990904	cellular_component	ribonucleoprotein complex
II	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
II	0003735	molecular_function	structural constituent of ribosome
II	0005737	cellular_component	cytoplasm
II	0005829	cellular_component	cytosol
II	0005840	cellular_component	ribosome
II	0006412	biological_process	translation
II	0022627	cellular_component	cytosolic small ribosomal subunit
II	0030686	cellular_component	90S preribosome
II	1990904	cellular_component	ribonucleoprotein complex
j	0000448	biological_process	cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
j	0002181	biological_process	cytoplasmic translation
j	0003723	molecular_function	RNA binding
j	0003735	molecular_function	structural constituent of ribosome
j	0005737	cellular_component	cytoplasm
j	0005829	cellular_component	cytosol
j	0005840	cellular_component	ribosome
j	0006412	biological_process	translation
j	0008270	molecular_function	zinc ion binding
j	0019843	molecular_function	rRNA binding
j	0022625	cellular_component	cytosolic large ribosomal subunit
j	0030687	cellular_component	preribosome, large subunit precursor
j	0044391	cellular_component	ribosomal subunit
j	0046872	molecular_function	metal ion binding
j	1990904	cellular_component	ribonucleoprotein complex
J	0000027	biological_process	ribosomal large subunit assembly
J	0002181	biological_process	cytoplasmic translation
J	0003723	molecular_function	RNA binding
J	0003735	molecular_function	structural constituent of ribosome
J	0005634	cellular_component	nucleus
J	0005737	cellular_component	cytoplasm
J	0005829	cellular_component	cytosol
J	0005840	cellular_component	ribosome
J	0006412	biological_process	translation
J	0019843	molecular_function	rRNA binding
J	0022625	cellular_component	cytosolic large ribosomal subunit
J	1990904	cellular_component	ribonucleoprotein complex
JJ	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
JJ	0003723	molecular_function	RNA binding
JJ	0003735	molecular_function	structural constituent of ribosome
JJ	0005515	molecular_function	protein binding
JJ	0005634	cellular_component	nucleus
JJ	0005730	cellular_component	nucleolus
JJ	0005737	cellular_component	cytoplasm
JJ	0005829	cellular_component	cytosol
JJ	0005840	cellular_component	ribosome
JJ	0006364	biological_process	rRNA processing
JJ	0006412	biological_process	translation
JJ	0015935	cellular_component	small ribosomal subunit
JJ	0019843	molecular_function	rRNA binding
JJ	0022627	cellular_component	cytosolic small ribosomal subunit
JJ	0030686	cellular_component	90S preribosome
JJ	0032040	cellular_component	small-subunit processome
JJ	0042254	biological_process	ribosome biogenesis
JJ	0042274	biological_process	ribosomal small subunit biogenesis
JJ	0043226	cellular_component	organelle
JJ	0045903	biological_process	positive regulation of translational fidelity
JJ	1990904	cellular_component	ribonucleoprotein complex
k	0002181	biological_process	cytoplasmic translation
k	0003735	molecular_function	structural constituent of ribosome
k	0005737	cellular_component	cytoplasm
k	0005829	cellular_component	cytosol
k	0005840	cellular_component	ribosome
k	0006412	biological_process	translation
k	0022618	biological_process	protein-RNA complex assembly
k	0022625	cellular_component	cytosolic large ribosomal subunit
k	1990904	cellular_component	ribonucleoprotein complex
KK	0000054	biological_process	ribosomal subunit export from nucleus
KK	0002181	biological_process	cytoplasmic translation
KK	0003723	molecular_function	RNA binding
KK	0003735	molecular_function	structural constituent of ribosome
KK	0005515	molecular_function	protein binding
KK	0005737	cellular_component	cytoplasm
KK	0005829	cellular_component	cytosol
KK	0005840	cellular_component	ribosome
KK	0022627	cellular_component	cytosolic small ribosomal subunit
KK	0034198	biological_process	cellular response to amino acid starvation
KK	0045860	biological_process	positive regulation of protein kinase activity
KK	1990904	cellular_component	ribonucleoprotein complex
l	0002181	biological_process	cytoplasmic translation
l	0003735	molecular_function	structural constituent of ribosome
l	0005515	molecular_function	protein binding
l	0005737	cellular_component	cytoplasm
l	0005829	cellular_component	cytosol
l	0005840	cellular_component	ribosome
l	0006412	biological_process	translation
l	0022625	cellular_component	cytosolic large ribosomal subunit
l	1990904	cellular_component	ribonucleoprotein complex
L	0002181	biological_process	cytoplasmic translation
L	0003723	molecular_function	RNA binding
L	0003735	molecular_function	structural constituent of ribosome
L	0005737	cellular_component	cytoplasm
L	0005829	cellular_component	cytosol
L	0005840	cellular_component	ribosome
L	0006412	biological_process	translation
L	0022625	cellular_component	cytosolic large ribosomal subunit
L	1990904	cellular_component	ribonucleoprotein complex
LL	0000028	biological_process	ribosomal small subunit assembly
LL	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LL	0003735	molecular_function	structural constituent of ribosome
LL	0005737	cellular_component	cytoplasm
LL	0005829	cellular_component	cytosol
LL	0005840	cellular_component	ribosome
LL	0006412	biological_process	translation
LL	0019843	molecular_function	rRNA binding
LL	0022627	cellular_component	cytosolic small ribosomal subunit
LL	0030686	cellular_component	90S preribosome
LL	1990904	cellular_component	ribonucleoprotein complex
m	0003735	molecular_function	structural constituent of ribosome
m	0005840	cellular_component	ribosome
m	0006412	biological_process	translation
M	0000027	biological_process	ribosomal large subunit assembly
M	0000470	biological_process	maturation of LSU-rRNA
M	0002181	biological_process	cytoplasmic translation
M	0003723	molecular_function	RNA binding
M	0003735	molecular_function	structural constituent of ribosome
M	0005730	cellular_component	nucleolus
M	0005737	cellular_component	cytoplasm
M	0005829	cellular_component	cytosol
M	0005840	cellular_component	ribosome
M	0006412	biological_process	translation
M	0016236	biological_process	macroautophagy
M	0022625	cellular_component	cytosolic large ribosomal subunit
M	0032991	cellular_component	protein-containing complex
M	0042273	biological_process	ribosomal large subunit biogenesis
M	0043229	cellular_component	intracellular organelle
M	1990904	cellular_component	ribonucleoprotein complex
MM	0003735	molecular_function	structural constituent of ribosome
MM	0005840	cellular_component	ribosome
MM	0006412	biological_process	translation
n	0003735	molecular_function	structural constituent of ribosome
n	0005840	cellular_component	ribosome
n	0006412	biological_process	translation
N	0002181	biological_process	cytoplasmic translation
N	0003723	molecular_function	RNA binding
N	0003735	molecular_function	structural constituent of ribosome
N	0005737	cellular_component	cytoplasm
N	0005829	cellular_component	cytosol
N	0005840	cellular_component	ribosome
N	0006412	biological_process	translation
N	0022625	cellular_component	cytosolic large ribosomal subunit
N	0022626	cellular_component	cytosolic ribosome
N	1990904	cellular_component	ribonucleoprotein complex
NN	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
NN	0002181	biological_process	cytoplasmic translation
NN	0003735	molecular_function	structural constituent of ribosome
NN	0005730	cellular_component	nucleolus
NN	0005737	cellular_component	cytoplasm
NN	0005829	cellular_component	cytosol
NN	0005840	cellular_component	ribosome
NN	0006412	biological_process	translation
NN	0022627	cellular_component	cytosolic small ribosomal subunit
NN	0030686	cellular_component	90S preribosome
NN	0070181	molecular_function	small ribosomal subunit rRNA binding
NN	1990904	cellular_component	ribonucleoprotein complex
o	0002181	biological_process	cytoplasmic translation
o	0003735	molecular_function	structural constituent of ribosome
o	0005737	cellular_component	cytoplasm
o	0005829	cellular_component	cytosol
o	0005840	cellular_component	ribosome
o	0006412	biological_process	translation
o	0008270	molecular_function	zinc ion binding
o	0022625	cellular_component	cytosolic large ribosomal subunit
o	0044391	cellular_component	ribosomal subunit
o	0046677	biological_process	response to antibiotic
o	0046898	biological_process	response to cycloheximide
o	1990904	cellular_component	ribonucleoprotein complex
O	0000470	biological_process	maturation of LSU-rRNA
O	0002181	biological_process	cytoplasmic translation
O	0003723	molecular_function	RNA binding
O	0003729	molecular_function	mRNA binding
O	0003735	molecular_function	structural constituent of ribosome
O	0005730	cellular_component	nucleolus
O	0005737	cellular_component	cytoplasm
O	0005829	cellular_component	cytosol
O	0005840	cellular_component	ribosome
O	0006412	biological_process	translation
O	0015934	cellular_component	large ribosomal subunit
O	0017148	biological_process	negative regulation of translation
O	0022625	cellular_component	cytosolic large ribosomal subunit
O	1990904	cellular_component	ribonucleoprotein complex
OO	0000028	biological_process	ribosomal small subunit assembly
OO	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
OO	0002181	biological_process	cytoplasmic translation
OO	0003723	molecular_function	RNA binding
OO	0003735	molecular_function	structural constituent of ribosome
OO	0005634	cellular_component	nucleus
OO	0005730	cellular_component	nucleolus
OO	0005737	cellular_component	cytoplasm
OO	0005829	cellular_component	cytosol
OO	0005840	cellular_component	ribosome
OO	0006364	biological_process	rRNA processing
OO	0006412	biological_process	translation
OO	0022627	cellular_component	cytosolic small ribosomal subunit
OO	0030490	biological_process	maturation of SSU-rRNA
OO	0032040	cellular_component	small-subunit processome
OO	0042254	biological_process	ribosome biogenesis
OO	0070181	molecular_function	small ribosomal subunit rRNA binding
OO	1990904	cellular_component	ribonucleoprotein complex
p	0002181	biological_process	cytoplasmic translation
p	0003735	molecular_function	structural constituent of ribosome
p	0005737	cellular_component	cytoplasm
p	0005829	cellular_component	cytosol
p	0005840	cellular_component	ribosome
p	0006412	biological_process	translation
p	0022625	cellular_component	cytosolic large ribosomal subunit
p	0044391	cellular_component	ribosomal subunit
p	0046872	molecular_function	metal ion binding
p	0070180	molecular_function	large ribosomal subunit rRNA binding
p	1990904	cellular_component	ribonucleoprotein complex
P	0000448	biological_process	cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
P	0002181	biological_process	cytoplasmic translation
P	0003735	molecular_function	structural constituent of ribosome
P	0005737	cellular_component	cytoplasm
P	0005829	cellular_component	cytosol
P	0005840	cellular_component	ribosome
P	0006412	biological_process	translation
P	0015934	cellular_component	large ribosomal subunit
P	0022625	cellular_component	cytosolic large ribosomal subunit
P	0030687	cellular_component	preribosome, large subunit precursor
P	1990904	cellular_component	ribonucleoprotein complex
PP	0003723	molecular_function	RNA binding
PP	0003735	molecular_function	structural constituent of ribosome
PP	0005840	cellular_component	ribosome
PP	0006412	biological_process	translation
PP	0015935	cellular_component	small ribosomal subunit
q	0000055	biological_process	ribosomal large subunit export from nucleus
q	0002181	biological_process	cytoplasmic translation
q	0003723	molecular_function	RNA binding
q	0003735	molecular_function	structural constituent of ribosome
q	0005737	cellular_component	cytoplasm
q	0005829	cellular_component	cytosol
q	0005840	cellular_component	ribosome
q	0006412	biological_process	translation
q	0015934	cellular_component	large ribosomal subunit
q	0022625	cellular_component	cytosolic large ribosomal subunit
q	0042254	biological_process	ribosome biogenesis
q	1990904	cellular_component	ribonucleoprotein complex
Q	0002181	biological_process	cytoplasmic translation
Q	0003723	molecular_function	RNA binding
Q	0003735	molecular_function	structural constituent of ribosome
Q	0005737	cellular_component	cytoplasm
Q	0005829	cellular_component	cytosol
Q	0005840	cellular_component	ribosome
Q	0006412	biological_process	translation
Q	0022625	cellular_component	cytosolic large ribosomal subunit
Q	0043232	cellular_component	intracellular non-membrane-bounded organelle
Q	1990904	cellular_component	ribonucleoprotein complex
QQ	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
QQ	0003723	molecular_function	RNA binding
QQ	0003735	molecular_function	structural constituent of ribosome
QQ	0005737	cellular_component	cytoplasm
QQ	0005829	cellular_component	cytosol
QQ	0005840	cellular_component	ribosome
QQ	0006412	biological_process	translation
QQ	0006413	biological_process	translational initiation
QQ	0022627	cellular_component	cytosolic small ribosomal subunit
QQ	0030686	cellular_component	90S preribosome
QQ	1990904	cellular_component	ribonucleoprotein complex
R	0002181	biological_process	cytoplasmic translation
R	0003723	molecular_function	RNA binding
R	0003735	molecular_function	structural constituent of ribosome
R	0005737	cellular_component	cytoplasm
R	0005829	cellular_component	cytosol
R	0005840	cellular_component	ribosome
R	0006412	biological_process	translation
R	0022625	cellular_component	cytosolic large ribosomal subunit
R	1990904	cellular_component	ribonucleoprotein complex
RR	0000028	biological_process	ribosomal small subunit assembly
RR	0002181	biological_process	cytoplasmic translation
RR	0003735	molecular_function	structural constituent of ribosome
RR	0005737	cellular_component	cytoplasm
RR	0005829	cellular_component	cytosol
RR	0005840	cellular_component	ribosome
RR	0006412	biological_process	translation
RR	0022627	cellular_component	cytosolic small ribosomal subunit
RR	1990904	cellular_component	ribonucleoprotein complex
S	0002181	biological_process	cytoplasmic translation
S	0003735	molecular_function	structural constituent of ribosome
S	0005737	cellular_component	cytoplasm
S	0005829	cellular_component	cytosol
S	0005840	cellular_component	ribosome
S	0006412	biological_process	translation
S	0022625	cellular_component	cytosolic large ribosomal subunit
S	1990904	cellular_component	ribonucleoprotein complex
SS	0000054	biological_process	ribosomal subunit export from nucleus
SS	0000447	biological_process	endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SS	0002181	biological_process	cytoplasmic translation
SS	0003676	molecular_function	nucleic acid binding
SS	0003723	molecular_function	RNA binding
SS	0003735	molecular_function	structural constituent of ribosome
SS	0005737	cellular_component	cytoplasm
SS	0005739	cellular_component	mitochondrion
SS	0005829	cellular_component	cytosol
SS	0005840	cellular_component	ribosome
SS	0006412	biological_process	translation
SS	0015935	cellular_component	small ribosomal subunit
SS	0019843	molecular_function	rRNA binding
SS	0022627	cellular_component	cytosolic small ribosomal subunit
SS	1990904	cellular_component	ribonucleoprotein complex
T	0002181	biological_process	cytoplasmic translation
T	0003735	molecular_function	structural constituent of ribosome
T	0005737	cellular_component	cytoplasm
T	0005829	cellular_component	cytosol
T	0005840	cellular_component	ribosome
T	0006412	biological_process	translation
T	0022625	cellular_component	cytosolic large ribosomal subunit
T	1990904	cellular_component	ribonucleoprotein complex
TT	0000028	biological_process	ribosomal small subunit assembly
TT	0000054	biological_process	ribosomal subunit export from nucleus
TT	0003723	molecular_function	RNA binding
TT	0003735	molecular_function	structural constituent of ribosome
TT	0005737	cellular_component	cytoplasm
TT	0005829	cellular_component	cytosol
TT	0005840	cellular_component	ribosome
TT	0006412	biological_process	translation
TT	0022627	cellular_component	cytosolic small ribosomal subunit
TT	0042254	biological_process	ribosome biogenesis
TT	0042274	biological_process	ribosomal small subunit biogenesis
TT	1990904	cellular_component	ribonucleoprotein complex
U	0003735	molecular_function	structural constituent of ribosome
U	0005840	cellular_component	ribosome
U	0006412	biological_process	translation
UU	0003723	molecular_function	RNA binding
UU	0003735	molecular_function	structural constituent of ribosome
UU	0005840	cellular_component	ribosome
UU	0006412	biological_process	translation
UU	0015935	cellular_component	small ribosomal subunit
V	0002181	biological_process	cytoplasmic translation
V	0003735	molecular_function	structural constituent of ribosome
V	0005737	cellular_component	cytoplasm
V	0005829	cellular_component	cytosol
V	0005840	cellular_component	ribosome
V	0006412	biological_process	translation
V	0022625	cellular_component	cytosolic large ribosomal subunit
V	0070180	molecular_function	large ribosomal subunit rRNA binding
V	1990904	cellular_component	ribonucleoprotein complex
VV	0000447	biological_process	endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
VV	0000461	biological_process	endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
VV	0003735	molecular_function	structural constituent of ribosome
VV	0005737	cellular_component	cytoplasm
VV	0005829	cellular_component	cytosol
VV	0005840	cellular_component	ribosome
VV	0006364	biological_process	rRNA processing
VV	0006412	biological_process	translation
VV	0022627	cellular_component	cytosolic small ribosomal subunit
VV	1990904	cellular_component	ribonucleoprotein complex
WW	0002181	biological_process	cytoplasmic translation
WW	0003735	molecular_function	structural constituent of ribosome
WW	0005737	cellular_component	cytoplasm
WW	0005829	cellular_component	cytosol
WW	0005840	cellular_component	ribosome
WW	0006412	biological_process	translation
WW	0022627	cellular_component	cytosolic small ribosomal subunit
WW	1990904	cellular_component	ribonucleoprotein complex
X	0003735	molecular_function	structural constituent of ribosome
X	0005840	cellular_component	ribosome
X	0006412	biological_process	translation
X	0019843	molecular_function	rRNA binding
XX	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
XX	0003735	molecular_function	structural constituent of ribosome
XX	0005737	cellular_component	cytoplasm
XX	0005829	cellular_component	cytosol
XX	0005840	cellular_component	ribosome
XX	0006412	biological_process	translation
XX	0006450	biological_process	regulation of translational fidelity
XX	0015935	cellular_component	small ribosomal subunit
XX	0022627	cellular_component	cytosolic small ribosomal subunit
XX	1990145	biological_process	maintenance of translational fidelity
XX	1990904	cellular_component	ribonucleoprotein complex
Y	0002181	biological_process	cytoplasmic translation
Y	0003723	molecular_function	RNA binding
Y	0003735	molecular_function	structural constituent of ribosome
Y	0005737	cellular_component	cytoplasm
Y	0005829	cellular_component	cytosol
Y	0005840	cellular_component	ribosome
Y	0006412	biological_process	translation
Y	0015934	cellular_component	large ribosomal subunit
Y	0022625	cellular_component	cytosolic large ribosomal subunit
Y	0032991	cellular_component	protein-containing complex
Y	0042273	biological_process	ribosomal large subunit biogenesis
Y	0043229	cellular_component	intracellular organelle
Y	1990904	cellular_component	ribonucleoprotein complex
YY	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
YY	0002181	biological_process	cytoplasmic translation
YY	0003735	molecular_function	structural constituent of ribosome
YY	0005737	cellular_component	cytoplasm
YY	0005739	cellular_component	mitochondrion
YY	0005829	cellular_component	cytosol
YY	0005840	cellular_component	ribosome
YY	0006412	biological_process	translation
YY	0022627	cellular_component	cytosolic small ribosomal subunit
YY	1990904	cellular_component	ribonucleoprotein complex
Z	0002181	biological_process	cytoplasmic translation
Z	0003735	molecular_function	structural constituent of ribosome
Z	0005737	cellular_component	cytoplasm
Z	0005829	cellular_component	cytosol
Z	0005840	cellular_component	ribosome
Z	0006412	biological_process	translation
Z	0022625	cellular_component	cytosolic large ribosomal subunit
Z	1990904	cellular_component	ribonucleoprotein complex

Functional Information from PDB Data

site_id	AC1
Number of Residues	5
Details	binding site for residue ZN j 100

Chain	Residue
j	CYS19
j	CYS22
j	CYS34
j	SER36
j	CYS37

site_id	AC2
Number of Residues	4
Details	binding site for residue ZN m 200

Chain	Residue
m	CYS96
m	CYS99
m	CYS110
m	CYS115

site_id	AC3
Number of Residues	4
Details	binding site for residue ZN o 200

Chain	Residue
o	CYS12
o	CYS17
o	CYS74
o	CYS77

site_id	AC4
Number of Residues	4
Details	binding site for residue ZN aa 500

Chain	Residue
aa	CYS23
aa	CYS26
aa	CYS74
aa	CYS77

site_id	AC5
Number of Residues	1
Details	binding site for residue ZN bb 101

Chain	Residue
bb	CYS40

site_id	AC6
Number of Residues	5
Details	binding site for residue ZN ff 501

Chain	Residue
ff	PRO124
ff	LEU139
ff	TYR140
ff	CYS141
ff	GLY142

site_id	AC7
Number of Residues	16
Details	binding site for residue GDP 1 1101

Chain	Residue
1	VAL414
1	ASP415
1	THR416
1	GLY417
1	LYS418
1	THR419
1	LYS420
1	GLY437
1	ASN530
1	LYS531
1	ASP533
1	ARG534
1	SER598
1	ALA599
1	VAL600
5	G3022

site_id	AC8
Number of Residues	4
Details	binding site for residue U6A 3 101

Chain	Residue
3	A37
3	A38
4	A0
4	A1

site_id	AC9
Number of Residues	6
Details	binding site for residue MET 3 102

Chain	Residue
1	GLU921
1	ILE922
1	ASN923
1	GLY938
3	A76
I	SER104

Functional Information from PROSITE/UniProt

site_id	PS00049
Number of Residues	27
Details	RIBOSOMAL_L14 Ribosomal protein L14 signature. AIVVrqakswrrr.DGvflyFedNagVI

Chain	Residue	Details
V	ALA76-ILE102

site_id	PS00050
Number of Residues	16
Details	RIBOSOMAL_L23 Ribosomal protein L23 signature. KKAYVRLTadydaldI

Chain	Residue	Details
X	LYS120-ILE135

site_id	PS00051
Number of Residues	17
Details	RIBOSOMAL_L39E Ribosomal protein L39e signature. RTnntIryNakrRNWRR

Chain	Residue	Details
l	ARG30-ARG46

site_id	PS00052
Number of Residues	27
Details	RIBOSOMAL_S7 Ribosomal protein S7 signature. ErLtnsLMmngrnnGKKlkavrIIkhT

Chain	Residue	Details
FF	GLU93-THR119

site_id	PS00053
Number of Residues	18
Details	RIBOSOMAL_S8 Ribosomal protein S8 signature. GyvILTTSaGIMdheeAR

Chain	Residue	Details
WW	GLY100-ARG117

site_id	PS00054
Number of Residues	23
Details	RIBOSOMAL_S11 Ribosomal protein S11 signature. LrALarS.GLrIgrieDvTPvPSD

Chain	Residue	Details
OO	LEU102-ASP124

site_id	PS00055
Number of Residues	8
Details	RIBOSOMAL_S12 Ribosomal protein S12 signature. KqPNSAiR

Chain	Residue	Details
XX	LYS62-ARG69

site_id	PS00056
Number of Residues	13
Details	RIBOSOMAL_S17 Ribosomal protein S17 signature. GDiVtVgQcRPIS

Chain	Residue	Details
LL	GLY120-SER132

site_id	PS00323
Number of Residues	25
Details	RIBOSOMAL_S19 Ribosomal protein S19 signature. NGKafnqveIrpemLGhyLGEFsiT

Chain	Residue	Details
PP	ASN98-THR122

site_id	PS00358
Number of Residues	17
Details	RIBOSOMAL_L5 Ribosomal protein L5 signature. LeqLSGQtpVqSkARyT

Chain	Residue	Details
J	LEU37-THR53

site_id	PS00360
Number of Residues	19
Details	RIBOSOMAL_S9 Ribosomal protein S9 signature. GGGhvSQvyAirqAiAKGL

Chain	Residue	Details
QQ	GLY71-LEU89

site_id	PS00361
Number of Residues	16
Details	RIBOSOMAL_S10 Ribosomal protein S10 signature. AeqhNLvkkGPVrLPT

Chain	Residue	Details
UU	ALA45-THR60

site_id	PS00362
Number of Residues	31
Details	RIBOSOMAL_S15 Ribosomal protein S15 signature. VrkHLernRkDkdAkfrLilIesrihrLarY

Chain	Residue	Details
NN	VAL98-TYR128

site_id	PS00464
Number of Residues	25
Details	RIBOSOMAL_L22 Ribosomal protein L22 signature. RrrTyRAhGRinkyesspSHIELvV

Chain	Residue	Details
P	ARG126-VAL150

site_id	PS00467
Number of Residues	12
Details	RIBOSOMAL_L2 Ribosomal protein L2 signature. PktRGVAmNPvD

Chain	Residue	Details
A	PRO197-ASP208

site_id	PS00474
Number of Residues	24
Details	RIBOSOMAL_L3 Ribosomal protein L3 signature. FeqnemiDaiAvTkGHGfeGvthR

Chain	Residue	Details
B	PHE209-ARG232

site_id	PS00475
Number of Residues	32
Details	RIBOSOMAL_L15 Ribosomal protein L15 signature. KILGkGrIpnvp.ViVkarfVSklAeekIraaG

Chain	Residue	Details
a	LYS111-GLY142

site_id	PS00526
Number of Residues	20
Details	RIBOSOMAL_L19E Ribosomal protein L19e signature. QKRLaAsvvgVGkrkVWLDP

Chain	Residue	Details
R	GLN7-PRO26

site_id	PS00527
Number of Residues	23
Details	RIBOSOMAL_S14 Ribosomal protein S14 signature. RvCsshtglirkyg.LNICRqCFR

Chain	Residue	Details
dd	ARG22-ARG44

site_id	PS00528
Number of Residues	15
Details	RIBOSOMAL_S4E Ribosomal protein S4e signature. HlKRLAaPhhWlLdK

Chain	Residue	Details
EE	HIS8-LYS22

site_id	PS00529
Number of Residues	23
Details	RIBOSOMAL_S24E Ribosomal protein S24e signature. FGggKSvGFGlVYNSvaeakkfE

Chain	Residue	Details
YY	PHE64-GLU86

site_id	PS00548
Number of Residues	37
Details	RIBOSOMAL_S3 Ribosomal protein S3 signature. AKamkfadGfLihSgqpVndfIDtatrhvlMrqGvlG

Chain	Residue	Details
DD	ALA147-GLY183

site_id	PS00578
Number of Residues	12
Details	RIBOSOMAL_S6E Ribosomal protein S6e signature. ISGGnDkqGfPM

Chain	Residue	Details
GG	ILE52-MET63

site_id	PS00579
Number of Residues	15
Details	RIBOSOMAL_L29 Ribosomal protein L29 signature. SLPKIKtVRKSIACV

Chain	Residue	Details
h	SER40-VAL54

site_id	PS00580
Number of Residues	21
Details	RIBOSOMAL_L32E Ribosomal protein L32e signature. FkRhhsdRyhRVaen..WRKqkG

Chain	Residue	Details
e	PHE17-GLY37

site_id	PS00585
Number of Residues	33
Details	RIBOSOMAL_S5 Ribosomal protein S5 signature. GQrtrFkAvvVVGDsn.GhVGlGiktak.EVag.AI

Chain	Residue	Details
CC	GLY98-ILE130

site_id	PS00628
Number of Residues	20
Details	RIBOSOMAL_S19E Ribosomal protein S19e signature. PykhidaSgsInRkVLQaLE

Chain	Residue	Details
TT	PRO90-GLU109

site_id	PS00632
Number of Residues	25
Details	RIBOSOMAL_S4 Ribosomal protein S4 signature. LErRLqtqVYKlglAkSvhhARvLI

Chain	Residue	Details
JJ	LEU105-ILE129

site_id	PS00634
Number of Residues	33
Details	RIBOSOMAL_L30 Ribosomal protein L30 signature. VLqlLrLtRinSgTfvkvtkatleLLklIepYV

Chain	Residue	Details
F	VAL102-VAL134

site_id	PS00646
Number of Residues	14
Details	RIBOSOMAL_S13_1 Ribosomal protein S13 signature. RGiRHfwGlrVRGQ

Chain	Residue	Details
SS	ARG123-GLN136

site_id	PS00678
Number of Residues	15
Details	WD_REPEATS_1 Trp-Asp (WD) repeats signature. ALSAswDkTLRLWDV

Chain	Residue	Details
gg	ALA81-VAL95
gg	ILE170-LEU184
gg	ILE212-LEU226

site_id	PS00700
Number of Residues	22
Details	RIBOSOMAL_L6_2 Ribosomal protein L6 signature 2. QicrVrnKdiRkFlDGIYVshK

Chain	Residue	Details
H	GLN163-LYS184

site_id	PS00709
Number of Residues	25
Details	RIBOSOMAL_L30E_1 Ribosomal protein L30e signature 1. SgkytlGyKstVKslRqGksKlIII

Chain	Residue	Details
c	SER20-ILE44

site_id	PS00712
Number of Residues	16
Details	RIBOSOMAL_S17E Ribosomal protein S17e signature. IqSKrLRNkIAGYtTH

Chain	Residue	Details
RR	ILE41-HIS56

site_id	PS00733
Number of Residues	8
Details	RIBOSOMAL_S26E Ribosomal protein S26e signature. YCVSCAIH

Chain	Residue	Details
aa	TYR73-HIS80

site_id	PS00783
Number of Residues	24
Details	RIBOSOMAL_L13 Ribosomal protein L13 signature. LRGMVShktarGKaalerLkVFeG

Chain	Residue	Details
O	LEU84-GLY107

site_id	PS00939
Number of Residues	27
Details	RIBOSOMAL_L1E Ribosomal protein L1e signature. NhneKryATaSAIaATAvaslvlaRGH

Chain	Residue	Details
C	ASN114-HIS140

site_id	PS00948
Number of Residues	14
Details	RIBOSOMAL_S7E Ribosomal protein S7e signature. KLtRELEKKFQdRH

Chain	Residue	Details
HH	LYS76-HIS89

site_id	PS00961
Number of Residues	9
Details	RIBOSOMAL_S28E Ribosomal protein S28e signature. ESEREARrL

Chain	Residue	Details
cc	GLU58-LEU66

site_id	PS00962
Number of Residues	12
Details	RIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. AqLLLAANTHLG

Chain	Residue	Details
AA	ALA14-GLY25

site_id	PS00963
Number of Residues	25
Details	RIBOSOMAL_S2_2 Ribosomal protein S2 signature 2. PrlVIVtDprlDaqaIkEasyvNIP

Chain	Residue	Details
AA	PRO118-PRO142

site_id	PS00993
Number of Residues	21
Details	RIBOSOMAL_L30E_2 Ribosomal protein L30e signature 2. ELGTavGKlfrvgvVsIlEaG

Chain	Residue	Details
c	GLU76-GLY96

site_id	PS00996
Number of Residues	9
Details	RIBOSOMAL_S21E Ribosomal protein S21e signature. LYVPRKCSA

Chain	Residue	Details
VV	LEU11-ALA19

site_id	PS01073
Number of Residues	18
Details	RIBOSOMAL_L24E Ribosomal protein L24e signature. FsGakIyPGrGtlFvRgD

Chain	Residue	Details
W	PHE8-ASP25

site_id	PS01077
Number of Residues	20
Details	RIBOSOMAL_L37E Ribosomal protein L37e signature. GTpSfGkRhnks.HtlCnRCG

Chain	Residue	Details
j	GLY4-GLY23

site_id	PS01082
Number of Residues	18
Details	RIBOSOMAL_L7AE Ribosomal protein L7Ae signature. CkkmgVPYaiVkGKarLG

Chain	Residue	Details
G	CYS169-GLY186

site_id	PS01104
Number of Residues	15
Details	RIBOSOMAL_L13E Ribosomal protein L13e signature. RaGRGFTLaEVkaaG

Chain	Residue	Details
L	ARG70-GLY84

site_id	PS01105
Number of Residues	22
Details	RIBOSOMAL_L35AE Ribosomal protein L35Ae signature. GKVtRtHGnsGvVrAtFrnnLP

Chain	Residue	Details
f	GLY69-PRO90

site_id	PS01106
Number of Residues	18
Details	RIBOSOMAL_L18E Ribosomal protein L18e signature. KaLflSKinRPpVSVsRI

Chain	Residue	Details
Q	LYS50-ILE67

site_id	PS01107
Number of Residues	12
Details	RIBOSOMAL_L27E Ribosomal protein L27e signature. GKNqWFFskLRF

Chain	Residue	Details
Z	GLY125-PHE136

site_id	PS01108
Number of Residues	18
Details	RIBOSOMAL_L24 Ribosomal protein L24 signature. DDeVlVVrGskKGqe.GkI

Chain	Residue	Details
Y	ASP53-ILE70

site_id	PS01144
Number of Residues	15
Details	RIBOSOMAL_L31E Ribosomal protein L31e signature. VRLApeLNqAiWkRG

Chain	Residue	Details
d	VAL49-GLY63

site_id	PS01145
Number of Residues	14
Details	RIBOSOMAL_L34E Ribosomal protein L34e signature. TrSnKikvvKTPGG

Chain	Residue	Details
g	THR15-GLY28

site_id	PS01168
Number of Residues	33
Details	RIBOSOMAL_S27E Ribosomal protein S27e signature. KCpgClnittvFShAqtavtCesCStiLctPtG

Chain	Residue	Details
bb	LYS36-GLY68

site_id	PS01170
Number of Residues	19
Details	RIBOSOMAL_L6E Ribosomal protein L6e signature. NgvPLRRvnarYVIATSt.K

Chain	Residue	Details
E	ASN72-LYS90

site_id	PS01171
Number of Residues	26
Details	RIBOSOMAL_L21E Ribosomal protein L21e signature. GDiVdikangsiqk.GmpHkfYqGkTG

Chain	Residue	Details
T	GLY37-GLY62

site_id	PS01172
Number of Residues	12
Details	RIBOSOMAL_L44E Ribosomal protein L44e signature. KtTKKvvLRleC

Chain	Residue	Details
o	LYS63-CYS74

site_id	PS01189
Number of Residues	19
Details	RIBOSOMAL_S12E Ribosomal protein S12e signature. ALKvvLrtAlvhDGLarGL

Chain	Residue	Details
MM	ALA20-LEU38

site_id	PS01190
Number of Residues	11
Details	RIBOSOMAL_L36E Ribosomal protein L36e signature. PYERRlIDLIR

Chain	Residue	Details
i	PRO52-ARG62

site_id	PS01191
Number of Residues	13
Details	RIBOSOMAL_S3AE Ribosomal protein S3Ae signature. LkGRVvEvCLaDL

Chain	Residue	Details
BB	LEU61-LEU73

site_id	PS01193
Number of Residues	20
Details	RIBOSOMAL_S8E Ribosomal protein S8e signature. RsaTGAkraqf.RkKrKfELG

Chain	Residue	Details
II	ARG11-GLY30

site_id	PS01194
Number of Residues	24
Details	RIBOSOMAL_L15E Ribosomal protein L15e signature. DKARrLGYkAkqGFVIYRvRVrRG

Chain	Residue	Details
N	ASP46-GLY69

site_id	PS01199
Number of Residues	20
Details	RIBOSOMAL_L1 Ribosomal protein L1 signature. IkqVprlLGpqLSKAGkFPT

Chain	Residue	Details
q	ILE117-THR136

site_id	PS01257
Number of Residues	22
Details	RIBOSOMAL_L10E Ribosomal protein L10e signature. ADRlqqGMRgAWGKPhGlaARV

Chain	Residue	Details
I	ALA108-VAL129

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	5
Details	BINDING: BINDING => ECO:0000250\|UniProtKB:G0S8G9

Chain	Residue	Details
1	ASP415
1	THR419
1	GLN431
1	GLY437
1	THR439

site_id	SWS_FT_FI2
Number of Residues	2
Details	BINDING: BINDING => ECO:0000269\|PubMed:24686316

Chain	Residue	Details
1	ASN530
LL	LYS141
1	ALA599
SS	LYS49
SS	LYS80
SS	LYS96
LL	LYS79
LL	LYS96
LL	LYS105
LL	LYS133

site_id	SWS_FT_FI3
Number of Residues	1
Details	MOD_RES: Phosphoserine => ECO:0007744\|PubMed:19779198

Chain	Residue	Details
1	SER405
II	SER73
ff	LYS113
A	LYS119
A	LYS145

site_id	SWS_FT_FI4
Number of Residues	6
Details	CROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0007744\|PubMed:22106047

Chain	Residue	Details
gg	LYS47
II	SER155
gg	LYS54
gg	LYS108
gg	LYS138
gg	LYS162
EE	LYS179
EE	LYS211
EE	LYS233

site_id	SWS_FT_FI5
Number of Residues	1
Details	MOD_RES: Phosphothreonine => ECO:0007744\|PubMed:18407956

Chain	Residue	Details
II	THR107
B	LYS136

site_id	SWS_FT_FI6
Number of Residues	1
Details	MOD_RES: Phosphoserine => ECO:0007744\|PubMed:18407956

Chain	Residue	Details
II	SER159

site_id	SWS_FT_FI7
Number of Residues	5
Details	CROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0007744\|PubMed:22106047

Chain	Residue	Details
DD	LYS106
DD	LYS132
DD	LYS141
DD	LYS151
DD	LYS200

site_id	SWS_FT_FI8
Number of Residues	2
Details	CROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269\|PubMed:28757607, ECO:0000269\|PubMed:30718516, ECO:0000269\|PubMed:30893611, ECO:0000269\|PubMed:31819057, ECO:0007744\|PubMed:22106047

Chain	Residue	Details
DD	LYS212

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		Validation report (PDF)