Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6WDG

Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-B)

This is a non-PDB format compatible entry.
Functional Information from GO Data
ChainGOidnamespacecontents
B0000027biological_processribosomal large subunit assembly
B0000302biological_processresponse to reactive oxygen species
B0002181biological_processcytoplasmic translation
B0003735molecular_functionstructural constituent of ribosome
B0005515molecular_functionprotein binding
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0005840cellular_componentribosome
B0006412biological_processtranslation
B0009314biological_processresponse to radiation
B0015934cellular_componentlarge ribosomal subunit
B0022625cellular_componentcytosolic large ribosomal subunit
B1990904cellular_componentribonucleoprotein complex
C0000027biological_processribosomal large subunit assembly
C0000049molecular_functiontRNA binding
C0002181biological_processcytoplasmic translation
C0003723molecular_functionRNA binding
C0003735molecular_functionstructural constituent of ribosome
C0005737cellular_componentcytoplasm
C0005829cellular_componentcytosol
C0005840cellular_componentribosome
C0006412biological_processtranslation
C0022625cellular_componentcytosolic large ribosomal subunit
C0043229cellular_componentintracellular organelle
C0046677biological_processresponse to antibiotic
C1990904cellular_componentribonucleoprotein complex
D0002181biological_processcytoplasmic translation
D0003735molecular_functionstructural constituent of ribosome
D0005515molecular_functionprotein binding
D0005737cellular_componentcytoplasm
D0005840cellular_componentribosome
D0006412biological_processtranslation
D0022625cellular_componentcytosolic large ribosomal subunit
D1990904cellular_componentribonucleoprotein complex
E0002181biological_processcytoplasmic translation
E0003735molecular_functionstructural constituent of ribosome
E0005737cellular_componentcytoplasm
E0005840cellular_componentribosome
E0006412biological_processtranslation
E0022625cellular_componentcytosolic large ribosomal subunit
E1990904cellular_componentribonucleoprotein complex
F0002181biological_processcytoplasmic translation
F0003735molecular_functionstructural constituent of ribosome
F0005737cellular_componentcytoplasm
F0005840cellular_componentribosome
F0006412biological_processtranslation
F0022625cellular_componentcytosolic large ribosomal subunit
F0043229cellular_componentintracellular organelle
F1990904cellular_componentribonucleoprotein complex
G0000028biological_processribosomal small subunit assembly
G0002181biological_processcytoplasmic translation
G0003735molecular_functionstructural constituent of ribosome
G0005515molecular_functionprotein binding
G0005737cellular_componentcytoplasm
G0005840cellular_componentribosome
G0006412biological_processtranslation
G0008270molecular_functionzinc ion binding
G0015935cellular_componentsmall ribosomal subunit
G0022627cellular_componentcytosolic small ribosomal subunit
G1990904cellular_componentribonucleoprotein complex
H0003676molecular_functionnucleic acid binding
H0003723molecular_functionRNA binding
H0003735molecular_functionstructural constituent of ribosome
H0006412biological_processtranslation
I0000028biological_processribosomal small subunit assembly
I0000900molecular_functionmRNA regulatory element binding translation repressor activity
I0002181biological_processcytoplasmic translation
I0003723molecular_functionRNA binding
I0003735molecular_functionstructural constituent of ribosome
I0005515molecular_functionprotein binding
I0005737cellular_componentcytoplasm
I0005829cellular_componentcytosol
I0005840cellular_componentribosome
I0006353biological_processDNA-templated transcription termination
I0006412biological_processtranslation
I0006417biological_processregulation of translation
I0015935cellular_componentsmall ribosomal subunit
I0019843molecular_functionrRNA binding
I0022627cellular_componentcytosolic small ribosomal subunit
I0031564biological_processtranscription antitermination
I0042254biological_processribosome biogenesis
I0042274biological_processribosomal small subunit biogenesis
I0045947biological_processnegative regulation of translational initiation
I0046677biological_processresponse to antibiotic
I0048027molecular_functionmRNA 5'-UTR binding
I1990145biological_processmaintenance of translational fidelity
I1990904cellular_componentribonucleoprotein complex
J0000028biological_processribosomal small subunit assembly
J0002181biological_processcytoplasmic translation
J0003723molecular_functionRNA binding
J0003735molecular_functionstructural constituent of ribosome
J0005515molecular_functionprotein binding
J0005737cellular_componentcytoplasm
J0005829cellular_componentcytosol
J0005840cellular_componentribosome
J0006412biological_processtranslation
J0015935cellular_componentsmall ribosomal subunit
J0019843molecular_functionrRNA binding
J0022627cellular_componentcytosolic small ribosomal subunit
J0043229cellular_componentintracellular organelle
J0046677biological_processresponse to antibiotic
J1990145biological_processmaintenance of translational fidelity
J1990904cellular_componentribonucleoprotein complex
K0003735molecular_functionstructural constituent of ribosome
K0005840cellular_componentribosome
K0006412biological_processtranslation
K0019843molecular_functionrRNA binding
L0003723molecular_functionRNA binding
L0003735molecular_functionstructural constituent of ribosome
L0006412biological_processtranslation
L0015935cellular_componentsmall ribosomal subunit
M0000028biological_processribosomal small subunit assembly
M0002181biological_processcytoplasmic translation
M0003723molecular_functionRNA binding
M0003735molecular_functionstructural constituent of ribosome
M0005737cellular_componentcytoplasm
M0005829cellular_componentcytosol
M0005840cellular_componentribosome
M0006412biological_processtranslation
M0006417biological_processregulation of translation
M0019843molecular_functionrRNA binding
M0022627cellular_componentcytosolic small ribosomal subunit
M0043229cellular_componentintracellular organelle
M0043488biological_processregulation of mRNA stability
M1990904cellular_componentribonucleoprotein complex
N0000049molecular_functiontRNA binding
N0002181biological_processcytoplasmic translation
N0003723molecular_functionRNA binding
N0003735molecular_functionstructural constituent of ribosome
N0005737cellular_componentcytoplasm
N0005829cellular_componentcytosol
N0005840cellular_componentribosome
N0006412biological_processtranslation
N0022627cellular_componentcytosolic small ribosomal subunit
N0043229cellular_componentintracellular organelle
N1990904cellular_componentribonucleoprotein complex
O0000049molecular_functiontRNA binding
O0001072molecular_functiontranscription antitermination factor activity, RNA binding
O0002181biological_processcytoplasmic translation
O0003723molecular_functionRNA binding
O0003735molecular_functionstructural constituent of ribosome
O0005515molecular_functionprotein binding
O0005737cellular_componentcytoplasm
O0005829cellular_componentcytosol
O0005840cellular_componentribosome
O0006412biological_processtranslation
O0008023cellular_componenttranscription elongation factor complex
O0015935cellular_componentsmall ribosomal subunit
O0022627cellular_componentcytosolic small ribosomal subunit
O0031564biological_processtranscription antitermination
O0032784biological_processregulation of DNA-templated transcription elongation
O0042254biological_processribosome biogenesis
O1990904cellular_componentribonucleoprotein complex
P0002181biological_processcytoplasmic translation
P0003723molecular_functionRNA binding
P0003735molecular_functionstructural constituent of ribosome
P0005515molecular_functionprotein binding
P0005737cellular_componentcytoplasm
P0005829cellular_componentcytosol
P0005840cellular_componentribosome
P0006412biological_processtranslation
P0019843molecular_functionrRNA binding
P0022627cellular_componentcytosolic small ribosomal subunit
P0070181molecular_functionsmall ribosomal subunit rRNA binding
P1990904cellular_componentribonucleoprotein complex
Q0000049molecular_functiontRNA binding
Q0000372biological_processGroup I intron splicing
Q0002181biological_processcytoplasmic translation
Q0003723molecular_functionRNA binding
Q0003735molecular_functionstructural constituent of ribosome
Q0005515molecular_functionprotein binding
Q0005737cellular_componentcytoplasm
Q0005829cellular_componentcytosol
Q0005840cellular_componentribosome
Q0006412biological_processtranslation
Q0015935cellular_componentsmall ribosomal subunit
Q0019843molecular_functionrRNA binding
Q0022627cellular_componentcytosolic small ribosomal subunit
Q0033120biological_processpositive regulation of RNA splicing
Q0034336molecular_functionmisfolded RNA binding
Q0034337biological_processRNA folding
Q0046677biological_processresponse to antibiotic
Q1990145biological_processmaintenance of translational fidelity
Q1990904cellular_componentribonucleoprotein complex
R0000049molecular_functiontRNA binding
R0002181biological_processcytoplasmic translation
R0003676molecular_functionnucleic acid binding
R0003723molecular_functionRNA binding
R0003735molecular_functionstructural constituent of ribosome
R0005515molecular_functionprotein binding
R0005737cellular_componentcytoplasm
R0005829cellular_componentcytosol
R0005840cellular_componentribosome
R0006412biological_processtranslation
R0015935cellular_componentsmall ribosomal subunit
R0019843molecular_functionrRNA binding
R0022627cellular_componentcytosolic small ribosomal subunit
R1990904cellular_componentribonucleoprotein complex
S0000028biological_processribosomal small subunit assembly
S0000049molecular_functiontRNA binding
S0002181biological_processcytoplasmic translation
S0003735molecular_functionstructural constituent of ribosome
S0005737cellular_componentcytoplasm
S0005840cellular_componentribosome
S0006412biological_processtranslation
S0015935cellular_componentsmall ribosomal subunit
S0019843molecular_functionrRNA binding
S0022627cellular_componentcytosolic small ribosomal subunit
S0043229cellular_componentintracellular organelle
S1990904cellular_componentribonucleoprotein complex
T0000028biological_processribosomal small subunit assembly
T0002181biological_processcytoplasmic translation
T0003723molecular_functionRNA binding
T0003735molecular_functionstructural constituent of ribosome
T0005737cellular_componentcytoplasm
T0005829cellular_componentcytosol
T0005840cellular_componentribosome
T0006412biological_processtranslation
T0006417biological_processregulation of translation
T0019843molecular_functionrRNA binding
T0022627cellular_componentcytosolic small ribosomal subunit
T0035194biological_processregulatory ncRNA-mediated post-transcriptional gene silencing
T0043229cellular_componentintracellular organelle
T0070181molecular_functionsmall ribosomal subunit rRNA binding
T1903231molecular_functionmRNA base-pairing translational repressor activity
T1990904cellular_componentribonucleoprotein complex
U0000028biological_processribosomal small subunit assembly
U0000400molecular_functionfour-way junction DNA binding
U0002181biological_processcytoplasmic translation
U0003735molecular_functionstructural constituent of ribosome
U0004518molecular_functionnuclease activity
U0004519molecular_functionendonuclease activity
U0004520molecular_functionDNA endonuclease activity
U0005737cellular_componentcytoplasm
U0005840cellular_componentribosome
U0006259biological_processDNA metabolic process
U0006412biological_processtranslation
U0015935cellular_componentsmall ribosomal subunit
U0016787molecular_functionhydrolase activity
U0022627cellular_componentcytosolic small ribosomal subunit
U0043229cellular_componentintracellular organelle
U1990904cellular_componentribonucleoprotein complex
V0000028biological_processribosomal small subunit assembly
V0002181biological_processcytoplasmic translation
V0003723molecular_functionRNA binding
V0003735molecular_functionstructural constituent of ribosome
V0005737cellular_componentcytoplasm
V0005840cellular_componentribosome
V0006412biological_processtranslation
V0008270molecular_functionzinc ion binding
V0019843molecular_functionrRNA binding
V0022627cellular_componentcytosolic small ribosomal subunit
V0046677biological_processresponse to antibiotic
V0060090molecular_functionmolecular adaptor activity
V0070181molecular_functionsmall ribosomal subunit rRNA binding
V1990904cellular_componentribonucleoprotein complex
W0003735molecular_functionstructural constituent of ribosome
W0005840cellular_componentribosome
W0006412biological_processtranslation
X0003723molecular_functionRNA binding
X0003735molecular_functionstructural constituent of ribosome
X0005840cellular_componentribosome
X0006412biological_processtranslation
X0015935cellular_componentsmall ribosomal subunit
Y0000028biological_processribosomal small subunit assembly
Y0002181biological_processcytoplasmic translation
Y0003723molecular_functionRNA binding
Y0003735molecular_functionstructural constituent of ribosome
Y0005737cellular_componentcytoplasm
Y0005829cellular_componentcytosol
Y0005840cellular_componentribosome
Y0006412biological_processtranslation
Y0008073molecular_functionornithine decarboxylase inhibitor activity
Y0015935cellular_componentsmall ribosomal subunit
Y0019843molecular_functionrRNA binding
Y0022627cellular_componentcytosolic small ribosomal subunit
Y0070181molecular_functionsmall ribosomal subunit rRNA binding
Y1990904cellular_componentribonucleoprotein complex
Z0000028biological_processribosomal small subunit assembly
Z0002181biological_processcytoplasmic translation
Z0003723molecular_functionRNA binding
Z0003735molecular_functionstructural constituent of ribosome
Z0005737cellular_componentcytoplasm
Z0005829cellular_componentcytosol
Z0005840cellular_componentribosome
Z0006412biological_processtranslation
Z0019843molecular_functionrRNA binding
Z0022627cellular_componentcytosolic small ribosomal subunit
Z1990904cellular_componentribonucleoprotein complex
a0000027biological_processribosomal large subunit assembly
a0000049molecular_functiontRNA binding
a0002181biological_processcytoplasmic translation
a0003723molecular_functionRNA binding
a0003735molecular_functionstructural constituent of ribosome
a0005515molecular_functionprotein binding
a0005737cellular_componentcytoplasm
a0005829cellular_componentcytosol
a0005840cellular_componentribosome
a0006412biological_processtranslation
a0006417biological_processregulation of translation
a0015934cellular_componentlarge ribosomal subunit
a0019843molecular_functionrRNA binding
a0022625cellular_componentcytosolic large ribosomal subunit
a0045947biological_processnegative regulation of translational initiation
a1990904cellular_componentribonucleoprotein complex
b0000027biological_processribosomal large subunit assembly
b0002181biological_processcytoplasmic translation
b0003723molecular_functionRNA binding
b0003735molecular_functionstructural constituent of ribosome
b0005515molecular_functionprotein binding
b0005737cellular_componentcytoplasm
b0005829cellular_componentcytosol
b0005840cellular_componentribosome
b0006412biological_processtranslation
b0008270molecular_functionzinc ion binding
b0015934cellular_componentlarge ribosomal subunit
b0016740molecular_functiontransferase activity
b0019843molecular_functionrRNA binding
b0022625cellular_componentcytosolic large ribosomal subunit
b0032297biological_processnegative regulation of DNA-templated DNA replication initiation
b1990082cellular_componentDnaA-L2 complex
b1990904cellular_componentribonucleoprotein complex
c0000027biological_processribosomal large subunit assembly
c0002181biological_processcytoplasmic translation
c0003723molecular_functionRNA binding
c0003735molecular_functionstructural constituent of ribosome
c0005515molecular_functionprotein binding
c0005737cellular_componentcytoplasm
c0005829cellular_componentcytosol
c0005840cellular_componentribosome
c0006412biological_processtranslation
c0019843molecular_functionrRNA binding
c0022625cellular_componentcytosolic large ribosomal subunit
c1990904cellular_componentribonucleoprotein complex
d0001070molecular_functionRNA-binding transcription regulator activity
d0002181biological_processcytoplasmic translation
d0003677molecular_functionDNA binding
d0003723molecular_functionRNA binding
d0003735molecular_functionstructural constituent of ribosome
d0005515molecular_functionprotein binding
d0005737cellular_componentcytoplasm
d0005829cellular_componentcytosol
d0005840cellular_componentribosome
d0006353biological_processDNA-templated transcription termination
d0006412biological_processtranslation
d0006417biological_processregulation of translation
d0015934cellular_componentlarge ribosomal subunit
d0017148biological_processnegative regulation of translation
d0019843molecular_functionrRNA binding
d0022625cellular_componentcytosolic large ribosomal subunit
d0030371molecular_functiontranslation repressor activity
d0031555biological_processtranscriptional attenuation
d0042255biological_processribosome assembly
d0045892biological_processnegative regulation of DNA-templated transcription
d0046677biological_processresponse to antibiotic
d0048027molecular_functionmRNA 5'-UTR binding
d0060698molecular_functionendoribonuclease inhibitor activity
d1990904cellular_componentribonucleoprotein complex
d2000766biological_processnegative regulation of cytoplasmic translation
e0000049molecular_functiontRNA binding
e0002181biological_processcytoplasmic translation
e0003723molecular_functionRNA binding
e0003735molecular_functionstructural constituent of ribosome
e0005737cellular_componentcytoplasm
e0005829cellular_componentcytosol
e0005840cellular_componentribosome
e0006412biological_processtranslation
e0008097molecular_function5S rRNA binding
e0019843molecular_functionrRNA binding
e0022625cellular_componentcytosolic large ribosomal subunit
e1990904cellular_componentribonucleoprotein complex
f0000027biological_processribosomal large subunit assembly
f0002181biological_processcytoplasmic translation
f0003723molecular_functionRNA binding
f0003735molecular_functionstructural constituent of ribosome
f0005737cellular_componentcytoplasm
f0005829cellular_componentcytosol
f0005840cellular_componentribosome
f0006412biological_processtranslation
f0019843molecular_functionrRNA binding
f0022625cellular_componentcytosolic large ribosomal subunit
f0046677biological_processresponse to antibiotic
f0070180molecular_functionlarge ribosomal subunit rRNA binding
f1990904cellular_componentribonucleoprotein complex
g0002181biological_processcytoplasmic translation
g0003723molecular_functionRNA binding
g0003735molecular_functionstructural constituent of ribosome
g0005515molecular_functionprotein binding
g0005737cellular_componentcytoplasm
g0005829cellular_componentcytosol
g0005840cellular_componentribosome
g0006412biological_processtranslation
g0019843molecular_functionrRNA binding
g0022625cellular_componentcytosolic large ribosomal subunit
g0070180molecular_functionlarge ribosomal subunit rRNA binding
g1990904cellular_componentribonucleoprotein complex
h0003735molecular_functionstructural constituent of ribosome
h0006412biological_processtranslation
h0015934cellular_componentlarge ribosomal subunit
i0000027biological_processribosomal large subunit assembly
i0002181biological_processcytoplasmic translation
i0003723molecular_functionRNA binding
i0003735molecular_functionstructural constituent of ribosome
i0005515molecular_functionprotein binding
i0005737cellular_componentcytoplasm
i0005829cellular_componentcytosol
i0005840cellular_componentribosome
i0006412biological_processtranslation
i0006415biological_processtranslational termination
i0015968biological_processstringent response
i0019843molecular_functionrRNA binding
i0022625cellular_componentcytosolic large ribosomal subunit
i0070180molecular_functionlarge ribosomal subunit rRNA binding
i1990904cellular_componentribonucleoprotein complex
j0002181biological_processcytoplasmic translation
j0003729molecular_functionmRNA binding
j0003735molecular_functionstructural constituent of ribosome
j0005737cellular_componentcytoplasm
j0005829cellular_componentcytosol
j0005840cellular_componentribosome
j0006412biological_processtranslation
j0008270molecular_functionzinc ion binding
j0017148biological_processnegative regulation of translation
j0022625cellular_componentcytosolic large ribosomal subunit
j0043229cellular_componentintracellular organelle
j0048027molecular_functionmRNA 5'-UTR binding
j0070180molecular_functionlarge ribosomal subunit rRNA binding
j1990904cellular_componentribonucleoprotein complex
k0002181biological_processcytoplasmic translation
k0003723molecular_functionRNA binding
k0003735molecular_functionstructural constituent of ribosome
k0005515molecular_functionprotein binding
k0005737cellular_componentcytoplasm
k0005829cellular_componentcytosol
k0005840cellular_componentribosome
k0006412biological_processtranslation
k0015934cellular_componentlarge ribosomal subunit
k0019843molecular_functionrRNA binding
k0022625cellular_componentcytosolic large ribosomal subunit
k0070180molecular_functionlarge ribosomal subunit rRNA binding
k1990904cellular_componentribonucleoprotein complex
l0002181biological_processcytoplasmic translation
l0003723molecular_functionRNA binding
l0003735molecular_functionstructural constituent of ribosome
l0005515molecular_functionprotein binding
l0005737cellular_componentcytoplasm
l0005840cellular_componentribosome
l0006412biological_processtranslation
l0015934cellular_componentlarge ribosomal subunit
l0019843molecular_functionrRNA binding
l0022625cellular_componentcytosolic large ribosomal subunit
l1990904cellular_componentribonucleoprotein complex
m0000027biological_processribosomal large subunit assembly
m0000049molecular_functiontRNA binding
m0002181biological_processcytoplasmic translation
m0003723molecular_functionRNA binding
m0003735molecular_functionstructural constituent of ribosome
m0005737cellular_componentcytoplasm
m0005840cellular_componentribosome
m0006412biological_processtranslation
m0019843molecular_functionrRNA binding
m0022625cellular_componentcytosolic large ribosomal subunit
m1990904cellular_componentribonucleoprotein complex
n0000027biological_processribosomal large subunit assembly
n0002181biological_processcytoplasmic translation
n0003735molecular_functionstructural constituent of ribosome
n0005515molecular_functionprotein binding
n0005737cellular_componentcytoplasm
n0005829cellular_componentcytosol
n0005840cellular_componentribosome
n0006412biological_processtranslation
n0022625cellular_componentcytosolic large ribosomal subunit
n1990904cellular_componentribonucleoprotein complex
o0002181biological_processcytoplasmic translation
o0003723molecular_functionRNA binding
o0003735molecular_functionstructural constituent of ribosome
o0005737cellular_componentcytoplasm
o0005829cellular_componentcytosol
o0005840cellular_componentribosome
o0006412biological_processtranslation
o0008097molecular_function5S rRNA binding
o0019843molecular_functionrRNA binding
o0022625cellular_componentcytosolic large ribosomal subunit
o0043229cellular_componentintracellular organelle
o1990904cellular_componentribonucleoprotein complex
p0000027biological_processribosomal large subunit assembly
p0002181biological_processcytoplasmic translation
p0003723molecular_functionRNA binding
p0003735molecular_functionstructural constituent of ribosome
p0005737cellular_componentcytoplasm
p0005829cellular_componentcytosol
p0005840cellular_componentribosome
p0006412biological_processtranslation
p0019843molecular_functionrRNA binding
p0022625cellular_componentcytosolic large ribosomal subunit
p0070180molecular_functionlarge ribosomal subunit rRNA binding
p1990904cellular_componentribonucleoprotein complex
q0000900molecular_functionmRNA regulatory element binding translation repressor activity
q0002181biological_processcytoplasmic translation
q0003723molecular_functionRNA binding
q0003729molecular_functionmRNA binding
q0003735molecular_functionstructural constituent of ribosome
q0005737cellular_componentcytoplasm
q0005829cellular_componentcytosol
q0005840cellular_componentribosome
q0006412biological_processtranslation
q0017148biological_processnegative regulation of translation
q0019843molecular_functionrRNA binding
q0022625cellular_componentcytosolic large ribosomal subunit
q0070180molecular_functionlarge ribosomal subunit rRNA binding
q1990904cellular_componentribonucleoprotein complex
r0002181biological_processcytoplasmic translation
r0003723molecular_functionRNA binding
r0003735molecular_functionstructural constituent of ribosome
r0005737cellular_componentcytoplasm
r0005829cellular_componentcytosol
r0005840cellular_componentribosome
r0006412biological_processtranslation
r0019843molecular_functionrRNA binding
r0022625cellular_componentcytosolic large ribosomal subunit
r0043229cellular_componentintracellular organelle
r1990904cellular_componentribonucleoprotein complex
s0002181biological_processcytoplasmic translation
s0003723molecular_functionRNA binding
s0003735molecular_functionstructural constituent of ribosome
s0005515molecular_functionprotein binding
s0005737cellular_componentcytoplasm
s0005829cellular_componentcytosol
s0005840cellular_componentribosome
s0006412biological_processtranslation
s0015934cellular_componentlarge ribosomal subunit
s0019843molecular_functionrRNA binding
s0022625cellular_componentcytosolic large ribosomal subunit
s0042255biological_processribosome assembly
s0042256biological_processcytosolic ribosome assembly
s0046677biological_processresponse to antibiotic
s0070180molecular_functionlarge ribosomal subunit rRNA binding
s1902626biological_processassembly of large subunit precursor of preribosome
s1990904cellular_componentribonucleoprotein complex
t0000027biological_processribosomal large subunit assembly
t0002181biological_processcytoplasmic translation
t0003723molecular_functionRNA binding
t0003735molecular_functionstructural constituent of ribosome
t0005515molecular_functionprotein binding
t0005737cellular_componentcytoplasm
t0005840cellular_componentribosome
t0006412biological_processtranslation
t0019843molecular_functionrRNA binding
t0022625cellular_componentcytosolic large ribosomal subunit
t1990904cellular_componentribonucleoprotein complex
u0000027biological_processribosomal large subunit assembly
u0002181biological_processcytoplasmic translation
u0003723molecular_functionRNA binding
u0003735molecular_functionstructural constituent of ribosome
u0005515molecular_functionprotein binding
u0005737cellular_componentcytoplasm
u0005829cellular_componentcytosol
u0005840cellular_componentribosome
u0006412biological_processtranslation
u0019843molecular_functionrRNA binding
u0022625cellular_componentcytosolic large ribosomal subunit
u0070180molecular_functionlarge ribosomal subunit rRNA binding
u1990904cellular_componentribonucleoprotein complex
v0000027biological_processribosomal large subunit assembly
v0002181biological_processcytoplasmic translation
v0003723molecular_functionRNA binding
v0003735molecular_functionstructural constituent of ribosome
v0005737cellular_componentcytoplasm
v0005829cellular_componentcytosol
v0005840cellular_componentribosome
v0006412biological_processtranslation
v0008097molecular_function5S rRNA binding
v0009314biological_processresponse to radiation
v0017148biological_processnegative regulation of translation
v0019843molecular_functionrRNA binding
v0022625cellular_componentcytosolic large ribosomal subunit
v1990904cellular_componentribonucleoprotein complex
w0003735molecular_functionstructural constituent of ribosome
w0005840cellular_componentribosome
w0006412biological_processtranslation
x0000027biological_processribosomal large subunit assembly
x0002181biological_processcytoplasmic translation
x0003723molecular_functionRNA binding
x0003735molecular_functionstructural constituent of ribosome
x0005515molecular_functionprotein binding
x0005737cellular_componentcytoplasm
x0005829cellular_componentcytosol
x0005840cellular_componentribosome
x0006412biological_processtranslation
x0019843molecular_functionrRNA binding
x0022625cellular_componentcytosolic large ribosomal subunit
x1990904cellular_componentribonucleoprotein complex
y0000027biological_processribosomal large subunit assembly
y0002181biological_processcytoplasmic translation
y0003723molecular_functionRNA binding
y0003735molecular_functionstructural constituent of ribosome
y0005737cellular_componentcytoplasm
y0005840cellular_componentribosome
y0006412biological_processtranslation
y0019843molecular_functionrRNA binding
y0022625cellular_componentcytosolic large ribosomal subunit
y1990904cellular_componentribonucleoprotein complex
z0000027biological_processribosomal large subunit assembly
z0002181biological_processcytoplasmic translation
z0003735molecular_functionstructural constituent of ribosome
z0005737cellular_componentcytoplasm
z0005840cellular_componentribosome
z0006412biological_processtranslation
z0015934cellular_componentlarge ribosomal subunit
z0022625cellular_componentcytosolic large ribosomal subunit
z1990904cellular_componentribonucleoprotein complex
Functional Information from PROSITE/UniProt
site_idPS00430
Number of Residues66
DetailsTONB_DEPENDENT_REC_1 TonB-dependent receptor (TBDR) proteins signature 1. mireerllkvlraphvsekastameksntivlkvakdatkaeikaavqklfevevevv.........................................................NTLVVKGK
ChainResidueDetails
tMET1-LYS66

site_idPS00579
Number of Residues15
DetailsRIBOSOMAL_L29 Ribosomal protein L29 signature. QSHLLKqVRRDVARV
ChainResidueDetails
yGLN39-VAL53

site_idPS00475
Number of Residues31
DetailsRIBOSOMAL_L15 Ribosomal protein L15 signature. KVILaGeVttp..VtVrglrVTkgAraaIeaaG
ChainResidueDetails
lLYS109-GLY139

site_idPS00632
Number of Residues25
DetailsRIBOSOMAL_S4 Ribosomal protein S4 signature. LEgRLdnvVYRmgfGaTraeARqLV
ChainResidueDetails
ILEU93-VAL117

site_idPS00582
Number of Residues20
DetailsRIBOSOMAL_L33 Ribosomal protein L33 signature. YtTtKNkrtkPekLElkKFD
ChainResidueDetails
CTYR20-ASP39

site_idPS01108
Number of Residues18
DetailsRIBOSOMAL_L24 Ribosomal protein L24 signature. DDeViVLtGkdKGkr.GkV
ChainResidueDetails
uASP7-VAL24

site_idPS01048
Number of Residues10
DetailsRIBOSOMAL_S6 Ribosomal protein S6 signature. GrRQLAYpIN
ChainResidueDetails
KGLY43-ASN52

site_idPS01167
Number of Residues23
DetailsRIBOSOMAL_L17 Ribosomal protein L17 signature. IkTTlpKaKelrrvvEpLITlAK
ChainResidueDetails
nILE34-LYS56

site_idPS00474
Number of Residues24
DetailsRIBOSOMAL_L3 Ribosomal protein L3 signature. FadvkkvDvtGtSkGKGfaGtvkR
ChainResidueDetails
cPHE101-ARG124

site_idPS01015
Number of Residues16
DetailsRIBOSOMAL_L19 Ribosomal protein L19 signature. VkRrGAVR.KAKLYYLR
ChainResidueDetails
pVAL85-ARG100

site_idPS00525
Number of Residues9
DetailsRIBOSOMAL_L6_1 Ribosomal protein L6 signature 1. PEpYKGKGV
ChainResidueDetails
fPRO153-VAL161

site_idPS00831
Number of Residues15
DetailsRIBOSOMAL_L27 Ribosomal protein L27 signature. GsIIvRQRGtkfhaG
ChainResidueDetails
wGLY30-GLY44

site_idPS00586
Number of Residues12
DetailsRIBOSOMAL_L16_1 Ribosomal protein L16 signature 1. KRqGKIWIRVFP
ChainResidueDetails
mLYS58-PRO69

site_idPS00701
Number of Residues12
DetailsRIBOSOMAL_L16_2 Ribosomal protein L16 signature 2. RMGkGKGnveyW
ChainResidueDetails
mARG81-TRP92

site_idPS00962
Number of Residues12
DetailsRIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. MrDMLKAGVHFG
ChainResidueDetails
GMET5-GLY16

site_idPS00963
Number of Residues25
DetailsRIBOSOMAL_S2_2 Ribosomal protein S2 signature 2. PdaLFViDadhEhiaIkEannlGIP
ChainResidueDetails
GPRO157-PRO181

site_idPS00055
Number of Residues8
DetailsRIBOSOMAL_S12 Ribosomal protein S12 signature. KkPNSAlR
ChainResidueDetails
QLYS42-ARG49

site_idPS00651
Number of Residues28
DetailsRIBOSOMAL_L9 Ribosomal protein L9 signature. GslGdqvnVkaGYarNFLvpqgkAvpaT
ChainResidueDetails
gGLY13-THR40

site_idPS00936
Number of Residues27
DetailsRIBOSOMAL_L35 Ribosomal protein L35 signature. KTVrGAaKRFkktgkggfkhkhanl.RH
ChainResidueDetails
ELYS4-HIS30

site_idPS00732
Number of Residues10
DetailsRIBOSOMAL_S16 Ribosomal protein S16 signature. VtIRLARHGA
ChainResidueDetails
UVAL2-ALA11

site_idPS00362
Number of Residues31
DetailsRIBOSOMAL_S15 Ribosomal protein S15 signature. LqgHFaehKkDhhSrrgLlrMvsqrrkLldY
ChainResidueDetails
TLEU38-TYR68

site_idPS00053
Number of Residues18
DetailsRIBOSOMAL_S8 Ribosomal protein S8 signature. GiaVVSTSkGVMtdraAR
ChainResidueDetails
MGLY99-ARG116

site_idPS00361
Number of Residues16
DetailsRIBOSOMAL_S10 Ribosomal protein S10 signature. AkrtGAqvrGPIpLPT
ChainResidueDetails
OALA29-THR44

site_idPS01169
Number of Residues23
DetailsRIBOSOMAL_L21 Ribosomal protein L21 signature. VkivKfrrRKhyrkqqGHRQwfT
ChainResidueDetails
rVAL72-THR94

site_idPS00585
Number of Residues33
DetailsRIBOSOMAL_S5 Ribosomal protein S5 signature. GRifsFtAltVVGDgn.GrVGfGygkar.EVpa.AI
ChainResidueDetails
JGLY27-ILE59

site_idPS00527
Number of Residues23
DetailsRIBOSOMAL_S14 Ribosomal protein S14 signature. R.CrqtgrphgflrkFGLSRiKVR
ChainResidueDetails
SARG62-ARG84

site_idPS00061
Number of Residues29
DetailsADH_SHORT Short-chain dehydrogenases/reductases family signature. PdhkhavialTsiYGVGKTRSkAILaAAG
ChainResidueDetails
RPRO9-GLY37

site_idPS00646
Number of Residues14
DetailsRIBOSOMAL_S13_1 Ribosomal protein S13 signature. RGlRHrrGlpVRGQ
ChainResidueDetails
RARG86-GLN99

site_idPS00056
Number of Residues13
DetailsRIBOSOMAL_S17 Ribosomal protein S17 signature. GDvVeIrEcRPLS
ChainResidueDetails
VGLY55-SER67

site_idPS00464
Number of Residues25
DetailsRIBOSOMAL_L22 Ribosomal protein L22 signature. KriMpRAkGRadrilkrtSHITVvV
ChainResidueDetails
sLYS83-VAL107

site_idPS00358
Number of Residues17
DetailsRIBOSOMAL_L5 Ribosomal protein L5 signature. LaaISGQkpLiTkARkS
ChainResidueDetails
eLEU56-SER72

site_idPS00784
Number of Residues20
DetailsRIBOSOMAL_L34 Ribosomal protein L34 signature. KRTFQpsvlkRnrsh.GFraR
ChainResidueDetails
DLYS2-ARG21

site_idPS00054
Number of Residues23
DetailsRIBOSOMAL_S11 Ribosomal protein S11 signature. IrALnaA.GFrItnitDvTPiPHN
ChainResidueDetails
PILE96-ASN118

site_idPS01181
Number of Residues13
DetailsRIBOSOMAL_S21 Ribosomal protein S21 signature. DvALRRFKRsceK
ChainResidueDetails
ZASP12-LYS24

site_idPS01199
Number of Residues19
DetailsRIBOSOMAL_L1 Ribosomal protein L1 signature. MrvVgq.LGqvLGPRGlMPN
ChainResidueDetails
aMET121-ASN139

site_idPS00052
Number of Residues27
DetailsRIBOSOMAL_S7 Ribosomal protein S7 signature. SeLlakFVnilmvdGKKstaesIVysA
ChainResidueDetails
LSER19-ALA45

site_idPS00634
Number of Residues33
DetailsRIBOSOMAL_L30 Ribosomal protein L30 signature. TLlgLgLrRigHtVeredtpairgMInaVsfMV
ChainResidueDetails
zTHR22-VAL54

site_idPS00937
Number of Residues17
DetailsRIBOSOMAL_L20 Ribosomal protein L20 signature. KrqfRqLWIARINaaaR
ChainResidueDetails
qLYS53-ARG69

site_idPS00359
Number of Residues16
DetailsRIBOSOMAL_L11 Ribosomal protein L11 signature. RsIeGTarSMGlVVeD
ChainResidueDetails
iARG126-ASP141

site_idPS00783
Number of Residues23
DetailsRIBOSOMAL_L13 Ribosomal protein L13 signature. VKGMLPkgpl.GRamfrkLkVYaG
ChainResidueDetails
jVAL105-GLY127

site_idPS00548
Number of Residues35
DetailsRIBOSOMAL_S3 Ribosomal protein S3 signature. ARtewyreGrVplHt..LradIDyntseahTtyGviG
ChainResidueDetails
HALA162-GLY196

site_idPS00467
Number of Residues12
DetailsRIBOSOMAL_L2 Ribosomal protein L2 signature. PtvRGTAmNPvD
ChainResidueDetails
bPRO217-ASP228

site_idPS00323
Number of Residues25
DetailsRIBOSOMAL_S19 Ribosomal protein S19 signature. NGRqhvpvfVtdemVGhkLGEFapT
ChainResidueDetails
XASN52-THR76

site_idPS01109
Number of Residues35
DetailsRIBOSOMAL_L10 Ribosomal protein L10 signature. KqaIvaeVSevakgalsaVvaDsrGVTVdKMteLR
ChainResidueDetails
hLYS8-ARG42

site_idPS00828
Number of Residues27
DetailsRIBOSOMAL_L36 Ribosomal protein L36 signature. CrnCkiVkRdgvIrViCsaepKHkQrQ
ChainResidueDetails
FCYS11-GLN37

site_idPS00057
Number of Residues24
DetailsRIBOSOMAL_S18 Ribosomal protein S18 signature. IDYkd.IatLknYITEs.GKIvpsRI
ChainResidueDetails
WILE20-ILE43

site_idPS00360
Number of Residues19
DetailsRIBOSOMAL_S9 Ribosomal protein S9 signature. GGGisGQagAirhGiTRAL
ChainResidueDetails
NGLY68-LEU86

site_idPS00049
Number of Residues27
DetailsRIBOSOMAL_L14 Ribosomal protein L14 signature. AVVVrtkkgvrrp.DGsvirFdgNacVL
ChainResidueDetails
kALA60-LEU86

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsMOD_RES: N6-succinyllysine => ECO:0000269|PubMed:21151122
ChainResidueDetails
aLYS105
aLYS154
aLYS186
aLYS197

site_idSWS_FT_FI2
Number of Residues1
DetailsMOD_RES: N6-acetyllysine => ECO:0000269|PubMed:18723842
ChainResidueDetails
QLYS107
iLYS39

site_idSWS_FT_FI3
Number of Residues2
DetailsMOD_RES: N6-succinyllysine => ECO:0000269|PubMed:21151122
ChainResidueDetails
iLYS71
iLYS80

217705

PDB entries from 2024-03-27

PDB statisticsPDBj update infoContact PDBjnumon