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6WAA

K. pneumoniae Topoisomerase IV (ParE-ParC) in complex with DNA and compound 34 (7-[(1S,5R)-1-amino-3-azabicyclo[3.1.0]hexan-3-yl]-4-(aminomethyl)-1-cyclopropyl-3,6-difluoro-8-methylquinolin-2(1H)-one)

Functional Information from GO Data
ChainGOidnamespacecontents
B0003677molecular_functionDNA binding
B0003918molecular_functionDNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
B0005524molecular_functionATP binding
B0005694cellular_componentchromosome
B0006259biological_processDNA metabolic process
B0006265biological_processDNA topological change
D0003677molecular_functionDNA binding
D0003918molecular_functionDNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
D0005524molecular_functionATP binding
D0005694cellular_componentchromosome
D0006259biological_processDNA metabolic process
D0006265biological_processDNA topological change
F0003677molecular_functionDNA binding
F0003918molecular_functionDNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
F0005524molecular_functionATP binding
F0005694cellular_componentchromosome
F0006259biological_processDNA metabolic process
F0006265biological_processDNA topological change
H0003677molecular_functionDNA binding
H0003918molecular_functionDNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
H0005524molecular_functionATP binding
H0005694cellular_componentchromosome
H0006259biological_processDNA metabolic process
H0006265biological_processDNA topological change
Functional Information from PDB Data
site_idAC1
Number of Residues8
Detailsbinding site for residue MPD B 1501
ChainResidue
BGLN1269
BALA1317
BTHR1318
BTHR1319
BASP1320
BGLU1322
JDT24
JDA25

site_idAC2
Number of Residues1
Detailsbinding site for residue MPD B 1502
ChainResidue
BARG1372

site_idAC3
Number of Residues1
Detailsbinding site for residue MG B 1503
ChainResidue
BLYS1113

site_idAC4
Number of Residues2
Detailsbinding site for residue MG B 1504
ChainResidue
BASP491
BASP493

site_idAC5
Number of Residues1
Detailsbinding site for residue CL B 1505
ChainResidue
BARG1365

site_idAC6
Number of Residues4
Detailsbinding site for residue MPD D 1501
ChainResidue
DLYS1113
DPHE1115
KDA13
KDT14

site_idAC7
Number of Residues3
Detailsbinding site for residue MG D 1502
ChainResidue
DGLU419
DASP491
DASP493

site_idAC8
Number of Residues3
Detailsbinding site for residue MPD F 1501
ChainResidue
FARG1372
FALA1416
FGLU1419

site_idAC9
Number of Residues2
Detailsbinding site for residue MG F 1503
ChainResidue
FASP491
FASP493

site_idAD1
Number of Residues1
Detailsbinding site for residue MG F 1504
ChainResidue
MDA3

site_idAD2
Number of Residues3
Detailsbinding site for residue MPD H 1501
ChainResidue
HLYS1113
HPHE1115
ODA13

site_idAD3
Number of Residues4
Detailsbinding site for residue MPD H 1502
ChainResidue
HARG1372
HLEU1379
HHIS1424
HGLU1429

site_idAD4
Number of Residues2
Detailsbinding site for residue MG H 1503
ChainResidue
HASP491
HASP493

site_idAD5
Number of Residues1
Detailsbinding site for residue MG I 101
ChainResidue
IDG8

site_idAD6
Number of Residues8
Detailsbinding site for residue TNJ J 101
ChainResidue
BLYS442
BGLY443
BGLU461
BSER1080
IDT11
JDC15
JDA16
KDG12

site_idAD7
Number of Residues7
Detailsbinding site for residue TNJ J 102
ChainResidue
DLYS442
DGLU461
DSER1080
JDG12
KDC15
KDA16
LDT11

site_idAD8
Number of Residues2
Detailsbinding site for residue MG M 101
ChainResidue
MDT7
MDG8

site_idAD9
Number of Residues8
Detailsbinding site for residue TNJ N 101
ChainResidue
HLYS442
HGLY443
HGLU461
HSER1080
NDG12
ODC15
ODA16
PDT11

site_idAE1
Number of Residues8
Detailsbinding site for residue TNJ N 102
ChainResidue
FLYS442
FGLU461
FSER1080
HARG1119
MDT11
NDC15
NDA16
ODG12

site_idAE2
Number of Residues3
Detailsbinding site for residue MG O 101
ChainResidue
ODT17
PDG8
PDT9

Functional Information from PROSITE/UniProt
site_idPS00177
Number of Residues9
DetailsTOPOISOMERASE_II DNA topoisomerase II signature. LVEGDSAGG
ChainResidueDetails
BLEU417-GLY425

222415

PDB entries from 2024-07-10

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