6W6E
The Mycobacterium tuberculosis ClpB disaggregase hexamer structure with a locally refined ClpB middle domain and a DnaK nucleotide binding domain
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0005524 | molecular_function | ATP binding |
A | 0005737 | cellular_component | cytoplasm |
A | 0005886 | cellular_component | plasma membrane |
A | 0009274 | cellular_component | peptidoglycan-based cell wall |
A | 0009408 | biological_process | response to heat |
A | 0016887 | molecular_function | ATP hydrolysis activity |
A | 0034605 | biological_process | cellular response to heat |
A | 0042026 | biological_process | protein refolding |
B | 0005524 | molecular_function | ATP binding |
B | 0005737 | cellular_component | cytoplasm |
B | 0005886 | cellular_component | plasma membrane |
B | 0009274 | cellular_component | peptidoglycan-based cell wall |
B | 0009408 | biological_process | response to heat |
B | 0016887 | molecular_function | ATP hydrolysis activity |
B | 0034605 | biological_process | cellular response to heat |
B | 0042026 | biological_process | protein refolding |
C | 0005524 | molecular_function | ATP binding |
C | 0005737 | cellular_component | cytoplasm |
C | 0005886 | cellular_component | plasma membrane |
C | 0009274 | cellular_component | peptidoglycan-based cell wall |
C | 0009408 | biological_process | response to heat |
C | 0016887 | molecular_function | ATP hydrolysis activity |
C | 0034605 | biological_process | cellular response to heat |
C | 0042026 | biological_process | protein refolding |
D | 0005524 | molecular_function | ATP binding |
D | 0005737 | cellular_component | cytoplasm |
D | 0005886 | cellular_component | plasma membrane |
D | 0009274 | cellular_component | peptidoglycan-based cell wall |
D | 0009408 | biological_process | response to heat |
D | 0016887 | molecular_function | ATP hydrolysis activity |
D | 0034605 | biological_process | cellular response to heat |
D | 0042026 | biological_process | protein refolding |
E | 0005524 | molecular_function | ATP binding |
E | 0005737 | cellular_component | cytoplasm |
E | 0005886 | cellular_component | plasma membrane |
E | 0009274 | cellular_component | peptidoglycan-based cell wall |
E | 0009408 | biological_process | response to heat |
E | 0016887 | molecular_function | ATP hydrolysis activity |
E | 0034605 | biological_process | cellular response to heat |
E | 0042026 | biological_process | protein refolding |
F | 0005524 | molecular_function | ATP binding |
F | 0005737 | cellular_component | cytoplasm |
F | 0005886 | cellular_component | plasma membrane |
F | 0009274 | cellular_component | peptidoglycan-based cell wall |
F | 0009408 | biological_process | response to heat |
F | 0016887 | molecular_function | ATP hydrolysis activity |
F | 0034605 | biological_process | cellular response to heat |
F | 0042026 | biological_process | protein refolding |
I | 0001968 | molecular_function | fibronectin binding |
I | 0005524 | molecular_function | ATP binding |
I | 0005576 | cellular_component | extracellular region |
I | 0005737 | cellular_component | cytoplasm |
I | 0005829 | cellular_component | cytosol |
I | 0005886 | cellular_component | plasma membrane |
I | 0006457 | biological_process | protein folding |
I | 0009274 | cellular_component | peptidoglycan-based cell wall |
I | 0009408 | biological_process | response to heat |
I | 0009986 | cellular_component | cell surface |
I | 0010756 | biological_process | positive regulation of plasminogen activation |
I | 0016887 | molecular_function | ATP hydrolysis activity |
I | 0031072 | molecular_function | heat shock protein binding |
I | 0035375 | molecular_function | zymogen binding |
I | 0042026 | biological_process | protein refolding |
I | 0042603 | cellular_component | capsule |
I | 0044183 | molecular_function | protein folding chaperone |
I | 0044406 | biological_process | adhesion of symbiont to host |
I | 0046677 | biological_process | response to antibiotic |
I | 0046688 | biological_process | response to copper ion |
I | 0046777 | biological_process | protein autophosphorylation |
I | 0051082 | molecular_function | unfolded protein binding |
I | 0051085 | biological_process | chaperone cofactor-dependent protein refolding |
I | 0071451 | biological_process | cellular response to superoxide |
I | 0097691 | cellular_component | bacterial extracellular vesicle |
I | 0140662 | molecular_function | ATP-dependent protein folding chaperone |
I | 2000679 | biological_process | positive regulation of transcription regulatory region DNA binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 14 |
Details | binding site for residue AGS A 901 |
Chain | Residue |
A | PRO179 |
A | LEU354 |
A | PRO388 |
B | ALA329 |
B | ARG332 |
B | ARG333 |
A | VAL180 |
A | ILE181 |
A | ARG183 |
A | GLY209 |
A | GLY211 |
A | LYS212 |
A | THR213 |
A | ILE350 |
site_id | AC2 |
Number of Residues | 12 |
Details | binding site for residue AGS A 902 |
Chain | Residue |
A | ARG571 |
A | THR609 |
A | GLY610 |
A | VAL611 |
A | GLY612 |
A | LYS613 |
A | THR614 |
A | GLU615 |
A | GLN768 |
A | ARG805 |
A | ARG808 |
B | ARG746 |
site_id | AC3 |
Number of Residues | 10 |
Details | binding site for residue AGS B 901 |
Chain | Residue |
B | PRO179 |
B | ILE181 |
B | GLY209 |
B | GLY211 |
B | LYS212 |
B | THR213 |
B | LEU354 |
C | ALA329 |
C | ARG332 |
C | ARG333 |
site_id | AC4 |
Number of Residues | 15 |
Details | binding site for residue AGS B 902 |
Chain | Residue |
B | ARG571 |
B | ILE573 |
B | THR609 |
B | GLY610 |
B | VAL611 |
B | GLY612 |
B | LYS613 |
B | THR614 |
B | GLU615 |
B | GLU680 |
B | GLN768 |
B | ALA804 |
B | ARG805 |
B | ARG808 |
C | ARG746 |
site_id | AC5 |
Number of Residues | 16 |
Details | binding site for residue AGS C 901 |
Chain | Residue |
C | ARG571 |
C | VAL572 |
C | ILE573 |
C | THR609 |
C | GLY610 |
C | VAL611 |
C | GLY612 |
C | LYS613 |
C | THR614 |
C | GLU615 |
C | ASN721 |
C | GLN768 |
C | ARG805 |
C | ARG808 |
D | GLU742 |
D | ARG746 |
site_id | AC6 |
Number of Residues | 11 |
Details | binding site for residue AGS D 901 |
Chain | Residue |
C | PRO179 |
C | VAL180 |
C | ILE181 |
C | GLY209 |
C | GLY211 |
C | LYS212 |
C | THR213 |
C | ILE350 |
C | LEU354 |
D | ARG332 |
D | ARG333 |
site_id | AC7 |
Number of Residues | 9 |
Details | binding site for residue AGS D 902 |
Chain | Residue |
D | VAL180 |
D | ILE181 |
D | GLY209 |
D | GLY211 |
D | LYS212 |
D | THR213 |
D | ILE350 |
D | LEU354 |
E | ARG332 |
site_id | AC8 |
Number of Residues | 13 |
Details | binding site for residue AGS D 903 |
Chain | Residue |
D | ARG808 |
D | ARG571 |
D | VAL572 |
D | ILE573 |
D | GLY574 |
D | THR609 |
D | GLY610 |
D | VAL611 |
D | GLY612 |
D | LYS613 |
D | THR614 |
D | GLU615 |
D | ALA804 |
site_id | AC9 |
Number of Residues | 14 |
Details | binding site for residue AGS E 901 |
Chain | Residue |
E | ASP178 |
E | PRO179 |
E | VAL180 |
E | PRO208 |
E | GLY209 |
E | VAL210 |
E | GLY211 |
E | LYS212 |
E | THR213 |
E | ALA214 |
E | ILE350 |
E | PRO388 |
E | ASP389 |
F | ARG332 |
site_id | AD1 |
Number of Residues | 12 |
Details | binding site for residue ADP E 902 |
Chain | Residue |
E | ARG571 |
E | VAL572 |
E | ILE573 |
E | THR609 |
E | GLY610 |
E | VAL611 |
E | GLY612 |
E | LYS613 |
E | THR614 |
E | ILE764 |
E | ALA804 |
E | ARG805 |
site_id | AD2 |
Number of Residues | 15 |
Details | binding site for residue AGS F 901 |
Chain | Residue |
A | ARG746 |
F | ARG571 |
F | VAL572 |
F | ILE573 |
F | THR609 |
F | GLY610 |
F | VAL611 |
F | GLY612 |
F | LYS613 |
F | THR614 |
F | GLU615 |
F | ILE764 |
F | ALA804 |
F | ARG805 |
F | ARG808 |
site_id | AD3 |
Number of Residues | 12 |
Details | binding site for residue ADP F 902 |
Chain | Residue |
F | ASP178 |
F | PRO179 |
F | GLU207 |
F | PRO208 |
F | GLY209 |
F | VAL210 |
F | GLY211 |
F | LYS212 |
F | THR213 |
F | ALA214 |
F | ILE350 |
F | LEU354 |
Functional Information from PROSITE/UniProt
site_id | PS00297 |
Number of Residues | 8 |
Details | HSP70_1 Heat shock hsp70 proteins family signature 1. IDLGTTnS |
Chain | Residue | Details |
I | ILE7-SER14 |
site_id | PS00329 |
Number of Residues | 14 |
Details | HSP70_2 Heat shock hsp70 proteins family signature 2. VFDLGGGTfdvSLL |
Chain | Residue | Details |
I | VAL168-LEU181 |
site_id | PS00870 |
Number of Residues | 13 |
Details | CLPAB_1 Chaperonins clpA/B signature 1. DAGNMIKPmLarG |
Chain | Residue | Details |
A | ASP295-GLY307 |
site_id | PS00871 |
Number of Residues | 19 |
Details | CLPAB_2 Chaperonins clpA/B signature 2. RIDmSEYgEKhTvARLiGA |
Chain | Residue | Details |
A | ARG633-ALA651 |
site_id | PS01036 |
Number of Residues | 15 |
Details | HSP70_3 Heat shock hsp70 proteins family signature 3. VvLvGGsTRMPaVtD |
Chain | Residue | Details |
I | VAL310-ASP324 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 1 |
Details | MOD_RES: Phosphothreonine; by autocatalysis => ECO:0000250 |
Chain | Residue | Details |
I | THR175 | |
E | GLY607 | |
F | GLY206 | |
F | GLY607 | |
A | GLY607 | |
B | GLY206 | |
B | GLY607 | |
C | GLY206 | |
C | GLY607 | |
D | GLY206 | |
D | GLY607 | |
E | GLY206 |